Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20164
(698 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 308 3e-86
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 304 4e-85
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 190 1e-50
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 165 5e-43
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.003
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.2
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 23 2.8
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.8
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 4.9
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 308 bits (756), Expect = 3e-86
Identities = 148/154 (96%), Positives = 148/154 (96%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 236 DKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 415
DKLKAE GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 416 GEFEAGISKNGQTREHALLAFTLGVKQLIVG*TK 517
GEFEAGISKNGQTREHALLAFTLGVKQLIVG K
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 154
Score = 136 bits (328), Expect = 2e-34
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 687
+NKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWF
Sbjct: 152 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 211
Query: 688 KGW 696
KGW
Sbjct: 212 KGW 214
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 304 bits (747), Expect = 4e-85
Identities = 146/154 (94%), Positives = 147/154 (95%)
Frame = +2
Query: 56 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 235
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 236 DKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 415
DKLKAE GITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 416 GEFEAGISKNGQTREHALLAFTLGVKQLIVG*TK 517
GEFEAGISKNGQTREHALLAFTLGVKQLIVG K
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 154
Score = 127 bits (307), Expect = 9e-32
Identities = 54/63 (85%), Positives = 58/63 (92%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 687
+NKMD T+PPYSE RFEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+
Sbjct: 152 VNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWY 211
Query: 688 KGW 696
KGW
Sbjct: 212 KGW 214
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 190 bits (462), Expect = 1e-50
Identities = 92/97 (94%), Positives = 92/97 (94%)
Frame = +2
Query: 227 WVLDKLKAELSVGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 406
WVLDKLKAE GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 407 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG*TK 517
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVG K
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNK 97
Score = 136 bits (328), Expect = 2e-34
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 687
+NKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWF
Sbjct: 95 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 154
Query: 688 KGW 696
KGW
Sbjct: 155 KGW 157
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 165 bits (400), Expect = 5e-43
Identities = 79/81 (97%), Positives = 79/81 (97%)
Frame = +2
Query: 275 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 454
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 455 REHALLAFTLGVKQLIVG*TK 517
REHALLAFTLGVKQLIVG K
Sbjct: 61 REHALLAFTLGVKQLIVGVNK 81
Score = 136 bits (328), Expect = 2e-34
Identities = 59/63 (93%), Positives = 61/63 (96%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWF 687
+NKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWF
Sbjct: 79 VNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWF 138
Query: 688 KGW 696
KGW
Sbjct: 139 KGW 141
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.52
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 68 KTHINIVVIGHVDSGKST 121
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.2
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 77 INIVVIGHVDSGKST 121
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 69 FSLPIFG*SRITNCV*Y 19
FSLPIFG I +C+ Y
Sbjct: 57 FSLPIFGTRWIFSCIGY 73
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 299 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 400
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 299 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 400
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 4.9
Identities = 13/46 (28%), Positives = 18/46 (39%)
Frame = -2
Query: 574 LPS*FPQIWAHCMVVQWNPFCLSYDELFDTEGESEQGMLTGLTVLR 437
LP IW+H V FC+ +T + +T TV R
Sbjct: 107 LPPEIYYIWSHFPYVFGEAFCIIQSFAAETSANATVLTITAFTVER 152
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 675 FG*RLQHVVSVPSRNGHESDSSWV 604
FG L H++ V +N + + WV
Sbjct: 35 FGLSLHHIIDVDEKNQILTTNCWV 58
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +2
Query: 518 WIPLNHHTVSPDLRKSRRKY 577
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,436
Number of Sequences: 438
Number of extensions: 4063
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -