Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20163
         (493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.3  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    22   9.9  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   9.9  
AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide recepto...    22   9.9  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    22   9.9  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 219 LVRFFACSSSWPFLNL 172
           L+R F  + SWP LNL
Sbjct: 903 LLRVFKLAKSWPTLNL 918


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 8   SGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 112
           +G C Y    + PG  K+  K+D   F F + +CE
Sbjct: 116 NGSCLY----VPPGIFKSTCKIDITWFPFDDQRCE 146


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 8   SGLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCE 112
           +G C Y    + PG  K+  K+D   F F + +CE
Sbjct: 148 NGSCLY----VPPGIFKSTCKIDITWFPFDDQRCE 178


>AY299455-1|AAQ73620.1|  493|Anopheles gambiae FMRF amide receptor
           protein.
          Length = 493

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -3

Query: 149 LLYEDSSSSNGRLHILNSG 93
           L+++DSS SNG     NSG
Sbjct: 391 LIHDDSSFSNGDASNRNSG 409


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 22.2 bits (45), Expect = 9.9
 Identities = 10/22 (45%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -3

Query: 305 LRTSGFILRLAIMSLS-EHQQS 243
           LRTSGF   L +M ++ +H Q+
Sbjct: 15  LRTSGFAFNLKVMQINVDHCQA 36


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 425,535
Number of Sequences: 2352
Number of extensions: 7237
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)