Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20163
         (493 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...   122   2e-28
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...   122   2e-28
AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p pro...    59   3e-09
AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA...    59   3e-09
AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    51   7e-07
BT010025-1|AAQ22494.1|  594|Drosophila melanogaster RE05480p pro...    28   6.0  
AE014134-1323|AAF52546.3|  596|Drosophila melanogaster CG13795-P...    28   6.0  

>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score =  122 bits (295), Expect = 2e-28
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = +2

Query: 11  GLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQ 190
           GLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +KG 
Sbjct: 4   GLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGI 63

Query: 191 EEEXXXXXXXXXXXXXXXIVGVHLVTL 271
           EEE               IVG  L  +
Sbjct: 64  EEEASKKRTRRTQKFQRAIVGASLAEI 90



 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 178 QKGPRGRTSKETY*KDPKVPTCDCWCSLSDIMAKRNMKPEV 300
           +KG     SK+   +  K        SL++I+AKRNMKPEV
Sbjct: 60  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score =  122 bits (295), Expect = 2e-28
 Identities = 55/87 (63%), Positives = 64/87 (73%)
 Frame = +2

Query: 11  GLCAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRRKFKKGQ 190
           GLCA+SGYKIYPGHGKTMVK+DGK+FTFL+ KCE ++LM+RNPRKVTWTVLYRRK +KG 
Sbjct: 4   GLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHRKGI 63

Query: 191 EEEXXXXXXXXXXXXXXXIVGVHLVTL 271
           EEE               IVG  L  +
Sbjct: 64  EEEASKKRTRRTQKFQRAIVGASLAEI 90



 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 178 QKGPRGRTSKETY*KDPKVPTCDCWCSLSDIMAKRNMKPEV 300
           +KG     SK+   +  K        SL++I+AKRNMKPEV
Sbjct: 60  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100


>AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p
           protein.
          Length = 191

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 25/52 (48%), Positives = 30/52 (57%)
 Frame = +2

Query: 17  CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 172
           C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 6   CYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA
           protein.
          Length = 191

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 25/52 (48%), Positives = 30/52 (57%)
 Frame = +2

Query: 17  CAYSGYKIYPGHGKTMVKVDGKTFTFLNSKCEAAHLMRRNPRKVTWTVLYRR 172
           C +   KIYPGHG   V+ D K F F   KC  A   ++NPRKV WT  YR+
Sbjct: 6   CYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRK 57


>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 51.2 bits (117), Expect = 7e-07
 Identities = 25/49 (51%), Positives = 28/49 (57%)
 Frame = +2

Query: 125 MRRNPRKVTWTVLYRRKFKKGQEEEXXXXXXXXXXXXXXXIVGVHLVTL 271
           M+RNPRKVTWTVLYRRK +KG EEE               IVG  L  +
Sbjct: 1   MKRNPRKVTWTVLYRRKHRKGIEEEASKKRTRRTQKFQRAIVGASLAEI 49



 Score = 31.9 bits (69), Expect = 0.48
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = +1

Query: 178 QKGPRGRTSKETY*KDPKVPTCDCWCSLSDIMAKRNMKPEV 300
           +KG     SK+   +  K        SL++I+AKRNMKPEV
Sbjct: 19  RKGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 59


>BT010025-1|AAQ22494.1|  594|Drosophila melanogaster RE05480p
           protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 155 SMLLYEDSSSSNGRLHILNSGM*RFFHPL*PWSCHGL 45
           SML+Y    ++   L I+NS     F P  PWSC GL
Sbjct: 110 SMLIYYSIFAAVPLLFIINS-----FRPTLPWSCEGL 141


>AE014134-1323|AAF52546.3|  596|Drosophila melanogaster CG13795-PA
           protein.
          Length = 596

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = -3

Query: 155 SMLLYEDSSSSNGRLHILNSGM*RFFHPL*PWSCHGL 45
           SML+Y    ++   L I+NS     F P  PWSC GL
Sbjct: 110 SMLIYYSIFAAVPLLFIINS-----FRPTLPWSCEGL 141


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,514,013
Number of Sequences: 53049
Number of extensions: 348544
Number of successful extensions: 696
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 674
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)