Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20162
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...   140   3e-35
EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            49   1e-07
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    46   1e-06
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    23   5.7  
AF080546-1|AAC29475.1|  432|Anopheles gambiae S-adenosyl-L-homoc...    23   9.9  

>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score =  140 bits (339), Expect = 3e-35
 Identities = 61/79 (77%), Positives = 70/79 (88%)
 Frame = +2

Query: 290 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQED 469
           IKCVVVGDG VGKTC+LISYTT++FPGEY+PT FDNYSA ++VDG  ++LGLWDTAGQED
Sbjct: 7   IKCVVVGDGTVGKTCMLISYTTDSFPGEYVPTSFDNYSAPMVVDGVQVSLGLWDTAGQED 66

Query: 470 YDRLRPLSYPQTDSSLYVF 526
           YDRLRPLSYPQTD  L  +
Sbjct: 67  YDRLRPLSYPQTDVFLICY 85



 Score = 46.8 bits (106), Expect = 5e-07
 Identities = 15/25 (60%), Positives = 20/25 (80%)
 Frame = +3

Query: 522 FFAGQPASFENVRAKWYPEVRHHCP 596
           +    P+SFENV +KWYPE++HHCP
Sbjct: 85  YSVASPSSFENVTSKWYPEIKHHCP 109


>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 48.8 bits (111), Expect = 1e-07
 Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
 Frame = +2

Query: 278 KMQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKPINLGLWDT 454
           K+   K V++G+ AVGK+ L++ +    F      T+   +    + +D   +   +WDT
Sbjct: 21  KICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTLCIDDTTVKFEIWDT 80

Query: 455 AGQEDYDRLRPLSYPQTDSSLYVF 526
           AGQE Y  L P+ Y    +++ V+
Sbjct: 81  AGQERYHSLAPMYYRGAQAAIVVY 104


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 45.6 bits (103), Expect = 1e-06
 Identities = 20/25 (80%), Positives = 21/25 (84%)
 Frame = +2

Query: 452 TAGQEDYDRLRPLSYPQTDSSLYVF 526
           +AGQEDYDRLRPLSYPQTD  L  F
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCF 25



 Score = 39.9 bits (89), Expect = 6e-05
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = +3

Query: 522 FFAGQPASFENVRAKWYPEVRHHC 593
           F    P+SFENV+ KW PE+ HHC
Sbjct: 25  FSVVSPSSFENVKEKWVPEITHHC 48


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1

Query: 479 VDRSLPVRLYPRGP 438
           V RSL V+LYP GP
Sbjct: 78  VVRSLAVQLYPAGP 91


>AF080546-1|AAC29475.1|  432|Anopheles gambiae
           S-adenosyl-L-homocysteine hydrolase protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 296 CVVVGDGAVGKTC 334
           CVV G G VGK C
Sbjct: 216 CVVAGYGDVGKGC 228


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,369
Number of Sequences: 2352
Number of extensions: 14326
Number of successful extensions: 33
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)