Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20160
         (544 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   3.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   5.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   9.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.2  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 127 KRANQLKFRVLCINFLIKMIPLVLFV---LGAILATTEG 234
           K   +LK+   CI  ++++ P V F+   LG  + T  G
Sbjct: 39  KSLQELKYMERCIKEVLRLYPSVPFIARSLGEDIVTYSG 77


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/29 (24%), Positives = 18/29 (62%)
 Frame = +1

Query: 403 LLLNAGPINVYPLTTALPNVIWADSLLDR 489
           +L+N   + ++  T+A    +W +S+++R
Sbjct: 434 ILINVPSLIIHVSTSAYVATVWINSVINR 462


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 506 TLVHQLNHPTLRL 544
           TLVHQLN   L L
Sbjct: 507 TLVHQLNTEVLHL 519


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +1

Query: 142 LKFRVLCINFLIKMIPLVLFVLGAILATTE 231
           L    + ++F + +IP  +F+L  IL   E
Sbjct: 290 LMLGTVVLSFFLCLIPFRVFILWIILVPEE 319


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,471
Number of Sequences: 336
Number of extensions: 2726
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)