Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20159
(589 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 186 2e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 186 2e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 2e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 96 2e-20
SB_54| Best HMM Match : Actin (HMM E-Value=0) 80 2e-15
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 61 8e-10
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 60 1e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 2e-09
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 55 5e-08
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 51 6e-07
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 36 0.025
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 33 0.23
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 32 0.30
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 32 0.30
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 32 0.30
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.30
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 32 0.40
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 32 0.40
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.53
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.53
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 1.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.2
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.2
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 30 1.2
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 30 1.2
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 1.2
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 30 1.2
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 1.2
SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 3.7
SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.7
SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9) 29 3.7
SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015) 29 3.7
SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.7
SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.7
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.9
SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0) 28 4.9
SB_23472| Best HMM Match : HIT (HMM E-Value=0.43) 28 6.5
SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028) 28 6.5
SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.5
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 28 6.5
SB_12041| Best HMM Match : PHD (HMM E-Value=0.001) 28 6.5
SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0) 28 6.5
SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.6
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 27 8.6
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0) 27 8.6
SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.6
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 109 bits (263), Expect = 1e-24
Identities = 50/53 (94%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIV+DSGDGV+HTVP
Sbjct: 151 GIVMDSGDGVTHTVP 165
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 107 bits (256), Expect = 9e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIV+DSGDGV+HTVP
Sbjct: 150 GIVMDSGDGVTHTVP 164
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 107
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 108 APLNPKANREKMTQIMFETFNSPAMYVAIQ 137
Score = 108 bits (259), Expect = 4e-24
Identities = 49/51 (96%), Positives = 51/51 (100%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIV+DSGDGV+HTVP
Sbjct: 150 GIVMDSGDGVTHTVP 164
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 114 bits (274), Expect = 6e-26
Identities = 51/53 (96%), Positives = 53/53 (100%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIV+DSGDGV+HTVP
Sbjct: 151 GIVMDSGDGVTHTVP 165
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 186 bits (452), Expect = 2e-47
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 49 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 108
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 109 APLNPKANREKMTQIMFETFNSPAMYVAIQ 138
Score = 109 bits (263), Expect = 1e-24
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = +3
Query: 96 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 53
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIV+DSGDGVSHTVP
Sbjct: 151 GIVMDSGDGVSHTVP 165
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 108 bits (259), Expect = 4e-24
Identities = 48/51 (94%), Positives = 51/51 (100%)
Frame = +3
Query: 102 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 52
Score = 80.2 bits (189), Expect = 1e-15
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF 367
G + YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 48 GQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +2
Query: 386 APEEHPVLLIEAPLNPK--ANREKMTQIMFETFNTPAMYVAIQ 508
A + +L ++ P+ N + M +IMFETFN+PAMYVAIQ
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIMFETFNSPAMYVAIQ 100
Score = 33.5 bits (73), Expect = 0.13
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIV+DSGDGV+HTVP
Sbjct: 113 GIVMDSGDGVTHTVP 127
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 96.3 bits (229), Expect = 2e-20
Identities = 44/98 (44%), Positives = 63/98 (64%), Gaps = 1/98 (1%)
Frame = +2
Query: 218 SGRDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPE 394
S + G + L VGDEA R +L + YP+++GIV NWDDM+ +W +TF +++ + P
Sbjct: 44 SQKVGDIEVKDLMVGDEASQLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPR 103
Query: 395 EHPVLLIEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 508
VLL E PLNP NREKM ++MFE + +Y+AIQ
Sbjct: 104 NTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQ 141
Score = 44.4 bits (100), Expect = 7e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +3
Query: 114 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 212
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
Score = 28.7 bits (61), Expect = 3.7
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G+V+DSGDGV+H P
Sbjct: 154 GVVIDSGDGVTHICP 168
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = +2
Query: 347 KIWHHTFYNELRVAPEEHPVLLIEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 508
K+W H F ++LRV E+ PVLL EAPLNPK NRE+M Q+MFE+FN P MYVA+Q
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQ 2182
Score = 59.7 bits (138), Expect = 2e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 221
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G V D GDGVSHTVP
Sbjct: 2195 GTVFDCGDGVSHTVP 2209
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 60.9 bits (141), Expect = 8e-10
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +2
Query: 395 EHPVLLIEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 508
+HPVLL EAPLNP+ NREK ++ FETFN PA+++++Q
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQ 163
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/15 (80%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G+VLD+GDGVSH+VP
Sbjct: 176 GVVLDAGDGVSHSVP 190
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 60.1 bits (139), Expect = 1e-09
Identities = 24/65 (36%), Positives = 41/65 (63%)
Frame = +2
Query: 305 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNPKANREKMTQIMFETFNT 484
PI+ G++ +WD EKI + + ++ HP+L+ EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 485 PAMYV 499
PA ++
Sbjct: 63 PAFFL 67
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 2e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 221
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 221 GRDGRYGTEGL--YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPE 394
GR + G E L ++GDEA K T K+PI H IV +WD ME+ W + LR PE
Sbjct: 273 GRSAK-GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPE 330
Query: 395 EHPVLL 412
+H LL
Sbjct: 331 DHYFLL 336
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 531 RSYHGIVLDSGDGVSHTVP 587
R+ G V+DSGDGV+H +P
Sbjct: 353 RTLTGCVIDSGDGVTHVIP 371
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 51.2 bits (117), Expect = 6e-07
Identities = 21/49 (42%), Positives = 32/49 (65%)
Frame = +3
Query: 90 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 236
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 218 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 102
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 36.7 bits (81), Expect = 0.014
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 221 GRDGRYGTEGLYVGDEAQSKRGIL-TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-- 391
GR G + GL VG++ S I L+ P + +VT+++ E++ H F + P
Sbjct: 105 GRKGEPDSGGLAVGNDIGSVEMIRWALRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGG 164
Query: 392 EEHPVLLIEAPLNPKANRE 448
HPV++ E NP R+
Sbjct: 165 VNHPVIMTEPVCNPNYCRQ 183
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 35.9 bits (79), Expect = 0.025
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +2
Query: 251 LYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 376
L++GD+ + + L Y P + G + NWD ++IW +TF E
Sbjct: 272 LFIGDQIEECKDYSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +3
Query: 108 EVAALVVDNGSGMCKAGFAGDDAPRAV 188
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 32.7 bits (71), Expect = 0.23
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 213 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVPT 259
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 408 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 454
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 271 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 317
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 249 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 295
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 91 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 32.3 bits (70), Expect = 0.30
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ V+LSH + H M D +HG RS SCET L T
Sbjct: 125 LTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 171
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +2
Query: 461 IMFETFNTPAMYVAIQ 508
IMFE FN+PA+YVAIQ
Sbjct: 1 IMFEAFNSPAVYVAIQ 16
Score = 31.5 bits (68), Expect = 0.53
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G+V DSGDGVSH VP
Sbjct: 29 GVVFDSGDGVSHNVP 43
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/48 (37%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H M D +HG RS SCET L T
Sbjct: 173 LTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 219
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 242 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1641 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 669 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 715
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 30.3 bits (65), Expect = 1.2
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 531 RSYHGIVLDSGDGVSHTVP 587
R+ G V+DSGDGV+H +P
Sbjct: 59 RTLTGCVIDSGDGVTHVIP 77
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 224 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 270
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 1079 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 1125
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 22 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 68
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
L C ++ ++LSH + H L A +HG R +SCET L T
Sbjct: 103 LTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALSCETQLVLT 149
>SB_48702| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 531
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/69 (27%), Positives = 29/69 (42%)
Frame = +2
Query: 335 DDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNPKANREKMTQIMFETFNTPAMYVAIQPC 514
+ +EK+ TF ++ HP L+ A L A+R T F +N P I+
Sbjct: 286 EPLEKLLQETFGENTKMTAVTHPKTLVTAVL---ADRRPATLYFFRNYNMPEDLEPIRKN 342
Query: 515 SRCTRPVVP 541
+ P VP
Sbjct: 343 NPFPPPPVP 351
>SB_36120| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 209
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 114
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 113 NFFVAHLE 90
V L+
Sbjct: 152 QVDVLLLD 159
>SB_34116| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 522
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 114
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 93 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 151
Query: 113 NFFVAHLE 90
V L+
Sbjct: 152 QVDVLLLD 159
>SB_15607| Best HMM Match : zf-MIZ (HMM E-Value=3.9)
Length = 221
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 114
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 126 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 184
Query: 113 NFFVAHLE 90
V L+
Sbjct: 185 QVDVLLLD 192
>SB_59500| Best HMM Match : RVT_1 (HMM E-Value=0.015)
Length = 224
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 114
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 43 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 101
Query: 113 NFFVAHLE 90
V L+
Sbjct: 102 QVDVLLLD 109
>SB_51232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1676
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 114
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 715 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 773
Query: 113 NFFVAHLE 90
V L+
Sbjct: 774 QVDVLLLD 781
>SB_11067| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1176
Score = 28.7 bits (61), Expect = 3.7
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRG 114
L C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 799 LTCLACKVMEHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHG 857
Query: 113 NFFVAHLE 90
V L+
Sbjct: 858 QVDVLLLD 865
>SB_640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/63 (30%), Positives = 28/63 (44%)
Frame = +1
Query: 400 PSXAH*GSPQPQGQQREDDPDHVRNIQHARHVRRHPTVLSLYASGRTTVSCWTPATVSPT 579
PS S Q GQ RED P R+ H+ +++ L+ R T + + +VSP
Sbjct: 577 PSYHRPTSFQANGQ-REDSPSKPRSPSHSEFLQQVANKLATEVDNRETTTTASSPSVSPP 635
Query: 580 PCP 588
P
Sbjct: 636 DTP 638
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 193 GNTARGASSPAKPALHIPEPLSTT 122
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_58989| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 885
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
H++ + ++SH +HH ++ + +HG R + SCE+ L
Sbjct: 470 HIITKNIVSHLEHHDILY-----KFQHGFRKLRSCESQL 503
>SB_23472| Best HMM Match : HIT (HMM E-Value=0.43)
Length = 168
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 44 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 80
>SB_18966| Best HMM Match : RVT_1 (HMM E-Value=0.028)
Length = 252
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 89 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 125
>SB_25064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1134
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 673 HIIFHDIMNHIDTHNILV-----KFQHGFRRFFSCETQLITT 709
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 292 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 328
>SB_12041| Best HMM Match : PHD (HMM E-Value=0.001)
Length = 560
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 503 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 539
>SB_12008| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 979
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = -3
Query: 266 HLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 141
H++ +++H D H ++ + +HG R SCET L T
Sbjct: 129 HIIFHDIMNHLDTHNILV-----KFQHGFRRFFSCETQLITT 165
>SB_46483| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 245
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 129 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 172
>SB_35376| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 931
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 470 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 513
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 27.5 bits (58), Expect = 8.6
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Frame = -3
Query: 278 CSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQRGNF 108
C ++ V+LSH + H L A +HG R+ SCET L H A + + G
Sbjct: 465 CLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKHGQV 523
Query: 107 FVAHLE 90
V L+
Sbjct: 524 DVLLLD 529
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 8.6
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 208 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 98
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_21844| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 411
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 78 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 121
>SB_52464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2529
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 1196 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1239
>SB_36891| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2124
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 1860 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 1903
>SB_30407| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 788
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 180 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 223
>SB_19106| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 217
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 70 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 113
>SB_12274| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 148 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 191
>SB_11572| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 888
Score = 27.5 bits (58), Expect = 8.6
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = -3
Query: 284 LFCSVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 150
L C ++ ++LSH + H D +HG RS SCET L
Sbjct: 209 LTCLSCKVMEHIVLSHLNKHLSAFNILSDL-QHGFRSGFSCETQL 252
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,179,254
Number of Sequences: 59808
Number of extensions: 487951
Number of successful extensions: 1546
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 1347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1540
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1422302661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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