Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20159
(589 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 186 1e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 186 1e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 186 1e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 184 4e-47
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 183 7e-47
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 183 7e-47
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 162 1e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 157 5e-39
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 155 3e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 100 1e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 9e-20
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 87 6e-18
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 69 2e-12
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 54 5e-08
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 2e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 1e-04
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 36 0.026
At5g57020.1 68418.m07117 myristoyl-CoA:protein N-myristoyltransf... 30 1.3
At3g11402.1 68416.m01388 DC1 domain-containing protein contains ... 30 1.3
At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 29 3.0
At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 29 3.0
At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 29 3.0
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 28 4.0
At1g43245.1 68414.m04985 expressed protein 28 4.0
At1g16690.2 68414.m01999 transcription factor-related similar to... 28 4.0
At1g16690.1 68414.m01998 transcription factor-related similar to... 28 4.0
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 28 5.3
At5g39280.1 68418.m04757 expansin, putative (EXP23) similar to e... 27 7.0
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.0
At2g43190.3 68415.m05368 ribonuclease P family protein similar t... 27 7.0
At2g43190.2 68415.m05367 ribonuclease P family protein similar t... 27 7.0
At2g43190.1 68415.m05366 ribonuclease P family protein similar t... 27 7.0
At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit, ... 27 9.3
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (453), Expect = 1e-47
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 84/90 (93%), Positives = 85/90 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 186 bits (452), Expect = 1e-47
Identities = 84/90 (93%), Positives = 85/90 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFNTPAMYVAIQ
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYVAIQ 139
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 83/90 (92%), Positives = 85/90 (94%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLL E
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYVAIQ 139
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 183 bits (446), Expect = 7e-47
Identities = 82/90 (91%), Positives = 84/90 (93%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LL E
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQ 139
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 183 bits (446), Expect = 7e-47
Identities = 82/90 (91%), Positives = 84/90 (93%)
Frame = +2
Query: 239 GTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIE 418
G + YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LL E
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 419 APLNPKANREKMTQIMFETFNTPAMYVAIQ 508
APLNPKANREKMTQIMFETFN PAMYVAIQ
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYVAIQ 139
Score = 92.3 bits (219), Expect = 2e-19
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNP 433
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLL EAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 434 KANREKMTQIMFETFNTPAMYVAIQ 508
KANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQ 139
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (443), Expect = 2e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNP 433
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLL EAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 434 KANREKMTQIMFETFNTPAMYVAIQ 508
KANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQ 139
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 80/85 (94%), Positives = 84/85 (98%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNP 433
YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLL EAPLNP
Sbjct: 55 YVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNP 114
Query: 434 KANREKMTQIMFETFNTPAMYVAIQ 508
KANREKMTQIMFETFN+PAMYVAIQ
Sbjct: 115 KANREKMTQIMFETFNSPAMYVAIQ 139
Score = 87.8 bits (208), Expect = 5e-18
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDA 54
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 152 GIVLDSGDGVSHTVP 166
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 162 bits (394), Expect = 1e-40
Identities = 68/85 (80%), Positives = 79/85 (92%)
Frame = +2
Query: 254 YVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNP 433
+VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LL EAPLNP
Sbjct: 56 FVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNP 115
Query: 434 KANREKMTQIMFETFNTPAMYVAIQ 508
K NREKMTQIMFE+F P+MY+ IQ
Sbjct: 116 KVNREKMTQIMFESFAFPSMYIGIQ 140
Score = 88.2 bits (209), Expect = 4e-18
Identities = 38/50 (76%), Positives = 45/50 (90%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS 254
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD+
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDT 55
Score = 35.5 bits (78), Expect = 0.026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
GIVLDSGDGVSHTVP
Sbjct: 153 GIVLDSGDGVSHTVP 167
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 157 bits (381), Expect = 5e-39
Identities = 66/86 (76%), Positives = 80/86 (93%)
Frame = +2
Query: 251 LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLN 430
L+VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLL EAPLN
Sbjct: 9 LFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLN 68
Query: 431 PKANREKMTQIMFETFNTPAMYVAIQ 508
PKA+REKMTQIMFETF P+MY+ +Q
Sbjct: 69 PKADREKMTQIMFETFAVPSMYIGMQ 94
Score = 28.7 bits (61), Expect = 3.0
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G VLDSGDGVS+ VP
Sbjct: 107 GTVLDSGDGVSYIVP 121
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 155 bits (375), Expect = 3e-38
Identities = 71/95 (74%), Positives = 79/95 (83%)
Frame = +2
Query: 224 RDGRYGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 403
RDG E YVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNES-YVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 404 VLLIEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 508
VLL EAP NPKANREKMTQIMFE+F+ PAMYV++Q
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQ 128
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 215
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
Score = 27.9 bits (59), Expect = 5.3
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G+VLD G+ VSHTVP
Sbjct: 141 GVVLDLGERVSHTVP 155
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 99.5 bits (237), Expect = 1e-21
Identities = 40/86 (46%), Positives = 56/86 (65%)
Frame = +2
Query: 251 LYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLN 430
+ VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LL + PLN
Sbjct: 53 IVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLN 112
Query: 431 PKANREKMTQIMFETFNTPAMYVAIQ 508
P NREKM + MFE +N +++ IQ
Sbjct: 113 PSKNREKMIETMFEKYNFAGVFIQIQ 138
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 212
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
Score = 30.7 bits (66), Expect = 0.75
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 543 GIVLDSGDGVSHTVP 587
G+V+DSGDGV+H VP
Sbjct: 151 GLVIDSGDGVTHVVP 165
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.5 bits (222), Expect = 9e-20
Identities = 44/87 (50%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +2
Query: 254 YVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAP 424
Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LL E+P
Sbjct: 69 YIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESP 128
Query: 425 LNPKANREKMTQIMFETFNTPAMYVAI 505
L P +RE +I+FETFN P +Y+A+
Sbjct: 129 LTPPESREYTGEILFETFNVPGLYIAV 155
Score = 35.9 bits (79), Expect = 0.020
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 203
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 87.4 bits (207), Expect = 6e-18
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = +2
Query: 251 LYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPL 427
LYVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PL
Sbjct: 75 LYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPL 134
Query: 428 NPKANREKMTQIMFETFNTPAMYVAIQP 511
N + REK ++MFE + PA+++A P
Sbjct: 135 NTQQQREKAAELMFEKYKVPALFMAKNP 162
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 206
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 68.9 bits (161), Expect = 2e-12
Identities = 32/76 (42%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +2
Query: 227 DGRYGTEGLYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 403
D G LY G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 404 VLLIEAPLNPKANREK 451
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 105 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 206
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 54.4 bits (125), Expect = 5e-08
Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 305 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPL-NPKANREKMTQIMFETFN 481
PIE G++ +WD ME + + Y L +L PL PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 482 TPAMYVAIQ 508
Y + Q
Sbjct: 117 VSGFYASEQ 125
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 117 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 209
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +2
Query: 296 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLIEAPLNPKANREKMTQIMFET 475
++ PI+ G + N D +IW H F + L +AP +LL EAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 476 FNTPAMYVA 502
F ++Y+A
Sbjct: 121 FGFSSLYIA 129
Score = 32.7 bits (71), Expect = 0.19
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 212
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.2 bits (97), Expect = 1e-04
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 305 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLIEAPLNPKANREKMTQIMFETFN 481
P + +V ++ ME I + F + +HP+L+ E NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 482 TPAM 493
PA+
Sbjct: 145 VPAV 148
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 120 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 221
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 35.5 bits (78), Expect = 0.026
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -1
Query: 355 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIESF-CPIPTITP*WRGLPTIEGNT 185
P L V+ ++ D + + + + YI + P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 184 ARGASSPAKPALHIPEPLSTTNAATSS 104
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g57020.1 68418.m07117 myristoyl-CoA:protein
N-myristoyltransferase 1 (NMT1) identical to
N-myristoyltransferase 1 (NMT1) [Arabidopsis thaliana]
GI:7339834
Length = 434
Score = 29.9 bits (64), Expect = 1.3
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 573 RHRRRSPARYRGTTGRVQREHGWMATYMAGVL 478
R +R +P + T RV E+ W A Y AGV+
Sbjct: 191 RSKRLAPVMIKEVTRRVHLENIWQAAYTAGVI 222
>At3g11402.1 68416.m01388 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 708
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 449 KMTQIMFETFNTPAMYVAIQPCSRCTRPVVPRY 547
K+T+ F+TP ++ I PC C +PV +Y
Sbjct: 322 KITRHQHRLFHTPYLHSTIPPCRICYKPVDIKY 354
>At1g31850.3 68414.m03915 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 TIP-WYDRTRTARARLDGDVHGGRVECFEHD 461
+IP W +R A R+ GDVHGG +HD
Sbjct: 402 SIPKWPERLHVAPERI-GDVHGGSANSLKHD 431
>At1g31850.2 68414.m03914 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 TIP-WYDRTRTARARLDGDVHGGRVECFEHD 461
+IP W +R A R+ GDVHGG +HD
Sbjct: 402 SIPKWPERLHVAPERI-GDVHGGSANSLKHD 431
>At1g31850.1 68414.m03913 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -1
Query: 550 TIP-WYDRTRTARARLDGDVHGGRVECFEHD 461
+IP W +R A R+ GDVHGG +HD
Sbjct: 402 SIPKWPERLHVAPERI-GDVHGGSANSLKHD 431
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +1
Query: 418 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPTVLSLY 525
GSP+ +G + E+D D + NI+H + +H LY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLY 129
>At1g43245.1 68414.m04985 expressed protein
Length = 558
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 275 SVPHLLHRVLLSHTDHHALMAGPSHDRGEHGARSIIS 165
S PH L+ +L T+HH LMA PS H A + I+
Sbjct: 96 SSPHRLNNLL---TNHHLLMADPSISVAIHHAANFIA 129
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 391
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 263 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP 391
D A L++KY + H I + W + +IW L+ P
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP 211
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = +2
Query: 236 YGTEGLYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 373
Y +G +G+E SK+ I+ ++ ++ + W+D+ K H N
Sbjct: 180 YYKDGEPLGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At5g39280.1 68418.m04757 expansin, putative (EXP23) similar to
expansin2 GI:4884433 from [Lycopersicon esculentum];
alpha-expansin gene family, PMID:11641069
Length = 259
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 565 SPESSTIPWYDRTRTARARLDGDVHGGRVE 476
SP WYD ARA GD+HGG +
Sbjct: 30 SPNGLDSSWYD----ARATFYGDIHGGETQ 55
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 217 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 95
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g43190.3 68415.m05368 ribonuclease P family protein similar to
Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4)
(Swiss-Prot:O95707) [Homo sapiens]
Length = 295
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 513 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASMSXTGC 397
HG +YM ++ V+ I + +LL+ L GA M C
Sbjct: 193 HGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAEC 231
>At2g43190.2 68415.m05367 ribonuclease P family protein similar to
Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4)
(Swiss-Prot:O95707) [Homo sapiens]
Length = 295
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 513 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASMSXTGC 397
HG +YM ++ V+ I + +LL+ L GA M C
Sbjct: 193 HGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAEC 231
>At2g43190.1 68415.m05366 ribonuclease P family protein similar to
Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4)
(Swiss-Prot:O95707) [Homo sapiens]
Length = 296
Score = 27.5 bits (58), Expect = 7.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 513 HGWMATYMAGVLNVSNMIWVIFSLLALGLRGASMSXTGC 397
HG +YM ++ V+ I + +LL+ L GA M C
Sbjct: 194 HGMWESYMMKLIKVTGKIQLSLTLLSADLHGAFMFVAEC 232
>At4g32410.1 68417.m04614 cellulose synthase, catalytic subunit,
putative similar to cellulose synthase-1 [gi:9622874]
and -2 [gi:9622876] from Zea mays
Length = 1081
Score = 27.1 bits (57), Expect = 9.3
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 412 H*GSPQPQGQQREDDPDHVRN 474
H GSP+ +G + EDD D + N
Sbjct: 91 HRGSPRVEGDEDEDDVDDIEN 111
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,231,672
Number of Sequences: 28952
Number of extensions: 313640
Number of successful extensions: 942
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1161268208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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