Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20158
(529 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19430.1 68416.m02464 late embryogenesis abundant protein-rel... 35 0.029
At4g18670.1 68417.m02762 leucine-rich repeat family protein / ex... 35 0.039
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.36
At5g01280.1 68418.m00037 expressed protein 31 0.48
At3g13220.1 68416.m01654 ABC transporter family protein contains... 31 0.48
At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to uclacy... 30 0.84
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 30 0.84
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 30 0.84
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 30 1.1
At2g37360.1 68415.m04582 ABC transporter family protein 30 1.1
At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N domain-... 30 1.1
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 30 1.1
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 30 1.1
At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1) domain... 29 1.5
At3g53510.1 68416.m05908 ABC transporter family protein breast c... 29 1.9
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 2.6
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 29 2.6
At3g09000.1 68416.m01053 proline-rich family protein 29 2.6
At2g23990.2 68415.m02866 plastocyanin-like domain-containing pro... 29 2.6
At2g23990.1 68415.m02865 plastocyanin-like domain-containing pro... 29 2.6
At3g24550.1 68416.m03083 protein kinase family protein contains ... 28 3.4
At2g44790.1 68415.m05574 uclacyanin II strong similarity to ucla... 28 3.4
At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid t... 28 3.4
At1g22870.1 68414.m02855 protein kinase family protein contains ... 28 3.4
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 3.4
At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identic... 28 4.5
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 28 4.5
At4g13340.1 68417.m02084 leucine-rich repeat family protein / ex... 28 4.5
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t... 28 4.5
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 28 4.5
At2g13610.1 68415.m01500 ABC transporter family protein 28 4.5
At4g34440.1 68417.m04894 protein kinase family protein contains ... 27 5.9
At4g27420.1 68417.m03941 ABC transporter family protein D.melano... 27 5.9
At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identic... 27 5.9
At3g18810.1 68416.m02389 protein kinase family protein contains ... 27 5.9
At2g01320.4 68415.m00049 ABC transporter family protein 27 5.9
At2g01320.3 68415.m00047 ABC transporter family protein 27 5.9
At2g01320.2 68415.m00046 ABC transporter family protein 27 5.9
At2g01320.1 68415.m00048 ABC transporter family protein 27 5.9
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 7.8
At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family... 27 7.8
At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family... 27 7.8
At4g16980.1 68417.m02560 arabinogalactan-protein family similar ... 27 7.8
At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identica... 27 7.8
At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identica... 27 7.8
At1g59910.1 68414.m06749 formin homology 2 domain-containing pro... 27 7.8
>At3g19430.1 68416.m02464 late embryogenesis abundant
protein-related / LEA protein-related similar to late
embryogenesis abundant protein [Picea glauca] GI:1350543
Length = 559
Score = 35.1 bits (77), Expect = 0.029
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 48 PTCPTSATGSRAPRWP--PTPSTGPSCSATRPTVISSIPRPPSRTWTWKTP 194
P PT + S P P P PS P S PT S+P PP T T TP
Sbjct: 155 PPTPTPSVPSPTPPVPTDPMPSPPPPVSPPPPTPTPSVPSPPDVTPTPPTP 205
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRTWTWKTP 194
+P+ P+ + P P PS P + T PT S+P PP T T TP
Sbjct: 189 TPSVPSPPDVTPTPPTPSVPSP-PDVTPTPPT--PSVPSPPDVTPTPPTP 235
>At4g18670.1 68417.m02762 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 839
Score = 34.7 bits (76), Expect = 0.039
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = +3
Query: 15 STRSRCTCAGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPP 167
S S T GSP P+S T S PPTPST P+ + IP PP
Sbjct: 535 SPPSTPTSPGSPPSPSSPTPSSPIPSPPTPSTPPTPISPGQNSPPIIPSPP 585
Score = 31.1 bits (67), Expect = 0.48
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
Frame = +3
Query: 48 PTCPTSAT-GSRAPRWP--PTPSTGPSCSATRPTVISSIPRPPS 170
PT PT+ T G P P PTP P S T PT S P P+
Sbjct: 469 PTSPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPTPGGSPPSSPT 512
Score = 31.1 bits (67), Expect = 0.48
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +3
Query: 33 TCAGSP-TCPTSAT-GSRAPRWPPTPSTG--PSCSATRPTVISSIPRPPS 170
T GSP + PT+ T G P P TPS G P + P+ ++P PPS
Sbjct: 489 TPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSPSISPSPPITVPSPPS 538
Score = 30.7 bits (66), Expect = 0.63
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 7/63 (11%)
Frame = +3
Query: 9 GRSTRSRCTCAGSPTCPTSA----TGSRAPRWP---PTPSTGPSCSATRPTVISSIPRPP 167
GRSTR PT P+ + S +P P P+P T PS + P+ S +P PP
Sbjct: 401 GRSTRPPVVVPSPPTTPSPGGSPPSPSISPSPPITVPSPPTTPSPGGSPPSP-SIVPSPP 459
Query: 168 SRT 176
S T
Sbjct: 460 STT 462
Score = 28.7 bits (61), Expect = 2.6
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRP 164
SPT PT + PTP P S T P+ S P P
Sbjct: 484 SPTTPTPGGSPPSSPTTPTPGGSPPSSPTTPSPGGSPPSP 523
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.5 bits (68), Expect = 0.36
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRP 164
SP+ PT T + P P T ++ PS + T P+ ++ P P
Sbjct: 159 SPSTPTPTTTTSPPPPPATSASPPSSNPTDPSTLAPPPTP 198
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +3
Query: 57 PTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPP 167
P T P PP + PS + P V+SS P PP
Sbjct: 23 PPLQTQPTTPSAPPPVTPPPSPPQSPPPVVSSSPPPP 59
>At5g01280.1 68418.m00037 expressed protein
Length = 460
Score = 31.1 bits (67), Expect = 0.48
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 6 RGRSTRSRCTCAGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRTWT 182
R S+ S P PT + + A R P TP++ + + TR T+ SS +R+W+
Sbjct: 83 RRPSSSSSSRSTSRPPTPTRKSKTPAKR-PSTPTSRATSTTTRATLTSSSTTSSTRSWS 140
>At3g13220.1 68416.m01654 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to white
protein GB:Q27256 [Anopheles gambiae]
Length = 685
Score = 31.1 bits (67), Expect = 0.48
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 23 IPVYLRWITYLSYIRYGFEGTALATYS 103
IP +++W+ YLS++ YGF YS
Sbjct: 598 IPKFMQWLKYLSFMHYGFRLLLKVQYS 624
>At3g60280.1 68416.m06738 uclacyanin 3 (UCC3) identical to
uclacyanin 3 GI:3395770 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin 3 (UCC3)GI:3395769
Length = 222
Score = 30.3 bits (65), Expect = 0.84
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +3
Query: 57 PTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPS 170
P+ +T S P P TPS+ PS P+ SS P PPS
Sbjct: 123 PSPSTPSSPPSTPSTPSSPPST----PSTPSSPPSPPS 156
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 30.3 bits (65), Expect = 0.84
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRTWTWKTP 194
S + P + +R P PP P+ P+ A TV + IP P T + TP
Sbjct: 113 SVSAPVAPAPTRPP--PPAPTPTPAPVAATETVTTPIPEPVPATISSSTP 160
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 30.3 bits (65), Expect = 0.84
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRTWTWKTP 194
S + P + +R P PP P+ P+ A TV + IP P T + TP
Sbjct: 113 SVSAPVAPAPTRPP--PPAPTPTPAPVAATETVTTPIPEPVPATISSSTP 160
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPS 170
+P P+ + S + PTPST PS S +V+SSIP P+
Sbjct: 16 TPPQPSDSKPSTLTQIQPTPSTNPSPS----SVVSSIPSSPA 53
>At2g37360.1 68415.m04582 ABC transporter family protein
Length = 755
Score = 29.9 bits (64), Expect = 1.1
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 11 SFNAIPVYLRWITYLSYIRYGFEG 82
S + IPVY W Y+S ++Y +EG
Sbjct: 630 SRDRIPVYWLWFHYISLVKYPYEG 653
>At2g26920.1 68415.m03229 ubiquitin-associated (UBA)/TS-N
domain-containing protein contains Pfam profile PF00627:
UBA/TS-N domain
Length = 646
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 57 PTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSR 173
P + RWPPT PS S + P+ S P+P R
Sbjct: 344 PQQSAALADKRWPPTTGQVPSASYSLPSSPSPSPQPAVR 382
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.9 bits (64), Expect = 1.1
Identities = 15/42 (35%), Positives = 18/42 (42%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPS 170
SP P+S +PP P P + P I S P PPS
Sbjct: 512 SPPPPSSEMSPSVRAYPPPPPLSPPPPSPPPPYIYSSPPPPS 553
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 33 TCAGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRT 176
T + P PT + RA P+PS P SA PT + +PP+ +
Sbjct: 29 TISPLPATPTPSQSPRATAPAPSPSANPPPSA--PTTAPPVSQPPTES 74
>At1g70640.1 68414.m08143 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile PF00564:
PB1 domain
Length = 174
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 12 RSTRSRCTCAGSPTCPTSATGSRAPRWPPTPSTGPSC 122
+STR+ + P+ +S++ R PP+PST +C
Sbjct: 109 KSTRTTANSSPPPSTTSSSSSKSRSRSPPSPSTPETC 145
>At3g53510.1 68416.m05908 ABC transporter family protein breast
cancer resistance protein (BCRP), Homo sapiens,
EMBL:AF098951
Length = 739
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 11 SFNAIPVYLRWITYLSYIRYGFEG 82
S + IP+Y W YLS ++Y +EG
Sbjct: 614 SRDRIPLYWIWFHYLSLVKYPYEG 637
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +3
Query: 48 PTCPTSATGSRAPRWPPTP--STGPSCSATRPTVISSIPRPPSRTWTWKTP 194
PT PT A PP P ST P AT P + P PP + TP
Sbjct: 54 PTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTP 104
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 28.7 bits (61), Expect = 2.6
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = +3
Query: 93 PPTPSTGPSCSATRPTVISSIPRPPSRTWTWKTP 194
PPTP P+ + T P V P PP T TP
Sbjct: 159 PPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTP 192
>At3g09000.1 68416.m01053 proline-rich family protein
Length = 541
Score = 28.7 bits (61), Expect = 2.6
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +3
Query: 15 STRSRCTCAGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSR 173
S RS +P P+SA+ + P TP+ PS + T P+++SS + PSR
Sbjct: 216 SARSATPTRSNPR-PSSASSKKPVSRPATPTRRPS-TPTGPSIVSS--KAPSR 264
>At2g23990.2 68415.m02866 plastocyanin-like domain-containing
protein
Length = 226
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRTWT 182
SP P + P PP PST P+ A P P P S T T
Sbjct: 149 SPNHPKPGPAAVTPTLPPKPSTTPAAPAPAPPT----PSPKSSTST 190
>At2g23990.1 68415.m02865 plastocyanin-like domain-containing
protein
Length = 207
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRTWT 182
SP P + P PP PST P+ A P P P S T T
Sbjct: 130 SPNHPKPGPAAVTPTLPPKPSTTPAAPAPAPPT----PSPKSSTST 171
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGP---SCSATRPTVISSIPRPPS 170
SP PT+ + PR PP+P+ GP +T T ++ P PPS
Sbjct: 89 SPPSPTTPSN---PRSPPSPNQGPPNTPSGSTPRTPSNTKPSPPS 130
>At2g44790.1 68415.m05574 uclacyanin II strong similarity to
uclacyanin II GI:3399769 from [Arabidopsis thaliana];
contains Pfam profile PF02298: Plastocyanin-like domain;
identical to cDNA uclacyanin II GI:3399768
Length = 202
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPT--VISSIPRPPSR 173
+PT P+S G+ P P +P +G S + T PT S+ P PP +
Sbjct: 134 TPTPPSSTPGT--PTTPESPPSGGSPTPTTPTPGAGSTSPPPPPK 176
>At1g36150.1 68414.m04494 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein low similarity to
glucoamylase S1/S2 [Precursor] from Saccharomyces
cerevisiae [SP|P08640], proteophosphoglycan from
Leishmania major [GI:5420387]; contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 256
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Frame = +3
Query: 30 CTCAGSPTCPTSATGSRAPRWPP--TPSTGPSCSATRPTVISSIP 158
C P C S + P PP +P+T PS SA P + S P
Sbjct: 113 CNVPIDPNCDVSTPAASTPVSPPVESPTTSPS-SAKSPAITPSSP 156
>At1g22870.1 68414.m02855 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 913
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 3 ARGRSTRSRCTCAGSPTCPTSATGSRAPRWPPTPSTGPSCS 125
A+ + +R AG+PT P+ WPP P++ + S
Sbjct: 722 AQPANDETRINAAGTPTTPSFDELDPFANWPPRPNSASTAS 762
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +3
Query: 48 PTCP-TSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPSRT 176
P CP T P PP P P A +P S P+PP+ T
Sbjct: 66 PACPPTPPKPQPKPAPPPEPKPAPP-PAPKPVPCPSPPKPPAPT 108
>At4g37450.1 68417.m05301 arabinogalactan-protein (AGP18) identical
to gi_11935088_gb_AAG41964
Length = 209
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 45 SPTCPT-SATGSRAPRWPPT-PSTGPSCSATRPTVISSIPRPPSRTWTWKTPI 197
+P+ PT S T S A P T P+ P+ SA+ P P P S + TP+
Sbjct: 34 TPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVSESSPPPTPV 86
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRW-PPTPSTGPSCSATRPTVISSIPRPP 167
SP P + P + PP P P S + P V S PRPP
Sbjct: 604 SPPPPVHSPPPPPPVYSPPPPVFSPPPSQSPPVVYSPPPRPP 645
>At4g13340.1 68417.m02084 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 760
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPS 170
SP P S P PP P P S P V SS P PPS
Sbjct: 486 SPPPPPPPVYSPPPP-PPPPPPPPVYSPPPPPVYSSPPPPPS 526
>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein identical to
pEARLI 1 (Accession No. L43080): an Arabidopsis member
of a conserved gene family (PGF95-099), Plant Physiol.
109 (4), 1497 (1995); contains Pfam protease
inhibitor/seed storage/LTP family domain PF00234
Length = 168
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +3
Query: 30 CTCAGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRP--PSRT 176
C C SP + P P P PS S P+V S PRP P RT
Sbjct: 28 CGCNPSPKHKPVPSPKPKPVPSPKPKPVPSPSVPSPSVPSPNPRPVTPPRT 78
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPP 167
S P+S + S A + PP P P + R + +SS P PP
Sbjct: 585 STPSPSSTSNSIATQGPPPPPPPPPLQSHR-SALSSSPLPP 624
>At2g13610.1 68415.m01500 ABC transporter family protein
Length = 649
Score = 27.9 bits (59), Expect = 4.5
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +2
Query: 11 SFNAIPVYLRWITYLSYIRYGFEGTALATYSFNRTKLQCHAPYCHFKYPQTTLEDLDMED 190
S + IP Y ++ Y+S +Y FEG + +S + L+ C E+ E+
Sbjct: 552 SNHEIPGYWIFMHYISLFKYPFEGFLINEFSKSNKCLEYGFGKCLVTEEDLLKEERYGEE 611
Query: 191 ADFALDIAALCLIFVLLRIFAFSSY 265
+ + + LC FVLL + F SY
Sbjct: 612 SRWRNVVIMLC--FVLL--YRFISY 632
>At4g34440.1 68417.m04894 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 670
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 33 TCAGSPTCPTSATGSRAPRWPPTPSTGP---SCSATRPTVISSIPRPPS 170
T G+P P++ T PPTP + P S SA P + +S PP+
Sbjct: 14 TSNGTP--PSNGTSPSNESSPPTPPSSPPPSSISAPPPDISASFSPPPA 60
>At4g27420.1 68417.m03941 ABC transporter family protein
D.melanogaster P element CaSpeR-1 gene (white
protein),PID:g870996
Length = 639
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 7/43 (16%)
Frame = +2
Query: 23 IPVYLRWITYLSYIRYGFEGTALATYSFNRT-------KLQCH 130
+PV++ WI Y+S Y ++ L Y+ N KL+CH
Sbjct: 551 VPVFISWIKYVSIGYYTYKLLILGQYTANELYPCGDNGKLRCH 593
>At4g09030.1 68417.m01490 arabinogalactan-protein (AGP10) identical
to gi|10880497|gb|AAG24278; supported by Ceres cDNA
265772
Length = 127
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +3
Query: 18 TRSRCTCAGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPPS 170
TRS P + T S P PTPS P+ + P S +P S
Sbjct: 29 TRSPLPSPAQPPRTAAPTPSITPTPTPTPSATPTAAPVSPPAGSPLPSSAS 79
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 45 SPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISS--IPRPPS 170
+P P+S+ + PP+ S+ PS A P SS P+PPS
Sbjct: 15 TPPSPSSSDNQQQSSPPPSDSSSPSPPAPPPPDDSSNGSPQPPS 58
>At2g01320.4 68415.m00049 ABC transporter family protein
Length = 725
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 26 PVYLRWITYLSYIRYGFEGTALATYS 103
P+ RWI S IR+ F+G + +S
Sbjct: 579 PIIFRWIPRASLIRWAFQGLCINEFS 604
>At2g01320.3 68415.m00047 ABC transporter family protein
Length = 728
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 26 PVYLRWITYLSYIRYGFEGTALATYS 103
P+ RWI S IR+ F+G + +S
Sbjct: 579 PIIFRWIPRASLIRWAFQGLCINEFS 604
>At2g01320.2 68415.m00046 ABC transporter family protein
Length = 727
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 26 PVYLRWITYLSYIRYGFEGTALATYS 103
P+ RWI S IR+ F+G + +S
Sbjct: 579 PIIFRWIPRASLIRWAFQGLCINEFS 604
>At2g01320.1 68415.m00048 ABC transporter family protein
Length = 725
Score = 27.5 bits (58), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 26 PVYLRWITYLSYIRYGFEGTALATYS 103
P+ RWI S IR+ F+G + +S
Sbjct: 579 PIIFRWIPRASLIRWAFQGLCINEFS 604
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 48 PTCPTSATGSRAPRW-PPTPSTGP-SCSATRPTVISSIPRPPSRTWTWKTP 194
PT + P + PPTP+ P + S +P + PP + T+K P
Sbjct: 110 PTPTVKPPSVQPPTYKPPTPTVKPPTTSPVKPPTTPPVQSPPVQPPTYKPP 160
>At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family
protein
Length = 438
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +3
Query: 45 SPTCPTSATGSRAPR----WPPTPSTGPSCSATRPTVISSIP--RPP 167
+P+ P+SA P+ WPP P P S PT + P +PP
Sbjct: 220 APSHPSSAQTQSFPQYQQNWPPQPQARPQSSGGYPTYSPAPPGNQPP 266
>At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family
protein
Length = 496
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Frame = +3
Query: 45 SPTCPTSATGSRAPR----WPPTPSTGPSCSATRPTVISSIP--RPP 167
+P+ P+SA P+ WPP P P S PT + P +PP
Sbjct: 278 APSHPSSAQTQSFPQYQQNWPPQPQARPQSSGGYPTYSPAPPGNQPP 324
>At4g16980.1 68417.m02560 arabinogalactan-protein family similar to
arabinogalactan protein [Arabidopsis thaliana]
gi|10880495|gb|AAG24277; contains proline-rich extensin
domains, INTERPRO:IPR002965
Length = 164
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +3
Query: 48 PTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPP 167
P P + P P TPST PS P + +P PP
Sbjct: 80 PMAPPPMPMASPPMMPMTPSTSPS-----PLTVPDMPSPP 114
>At2g14890.2 68415.m01692 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 176
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 SPTCPTSATGSR-APRWPPTPSTGPSCSATRPTVISSIP 158
+PT P +AT + P PP +T P SA P S P
Sbjct: 22 APTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP 60
>At2g14890.1 68415.m01693 arabinogalactan-protein (AGP9) identical
to gi|10880495|gb|AAG24277
Length = 191
Score = 27.1 bits (57), Expect = 7.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +3
Query: 45 SPTCPTSATGSR-APRWPPTPSTGPSCSATRPTVISSIP 158
+PT P +AT + P PP +T P SA P S P
Sbjct: 22 APTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP 60
>At1g59910.1 68414.m06749 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 929
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +3
Query: 39 AGSPTCPTSATGSRAPRWPPTPSTGPSCSATRPTVISSIPRPP 167
A +P P T + AP PP P+ S P ++ P PP
Sbjct: 357 ASTPLTPGQFTTANAPPAPPGPANQTSPPPPPPPSAAAPPPPP 399
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,327,378
Number of Sequences: 28952
Number of extensions: 174050
Number of successful extensions: 887
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 695
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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