Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20156
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    27   0.20 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   4.3  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   4.3  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.3  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   4.3  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.3  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    22   4.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   9.9  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 0.20
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
 Frame = +1

Query: 220 AFEVDDVTPSSIPQRQPQSHQNSQHVPT--NQDFTRRHHHQASQTDST 357
           A + D++ P  +P  +PQ  Q ++  PT  ++  T     Q  QT  T
Sbjct: 385 ALKSDEIPPEPVPTPEPQPTQTTESEPTQASEQPTESSTTQKPQTTKT 432


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +1

Query: 256 PQRQPQSHQN-SQHVPTNQDFTRRHHHQASQ 345
           P+  P    N + ++P   DF   HH Q  Q
Sbjct: 29  PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +1

Query: 256 PQRQPQSHQN-SQHVPTNQDFTRRHHHQASQ 345
           P+  P    N + ++P   DF   HH Q  Q
Sbjct: 29  PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 138 VHRSCCVNYQEY*WHHHVDHFKHENPIKF 52
           + + C VN Q Y  HH+ + F   +P KF
Sbjct: 381 IPKDCMVNLQIYDMHHNPNVF--PDPEKF 407


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +1

Query: 256 PQRQPQSHQN-SQHVPTNQDFTRRHHHQASQ 345
           P+  P    N + ++P   DF   HH Q  Q
Sbjct: 29  PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -1

Query: 138 VHRSCCVNYQEY*WHHHVDHFKHENPIKF 52
           + + C VN Q Y  HH+ + F   +P KF
Sbjct: 381 IPKDCMVNLQIYDMHHNPNVF--PDPEKF 407


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
 Frame = +1

Query: 256 PQRQPQSHQN-SQHVPTNQDFTRRHHHQASQ 345
           P+  P    N + ++P   DF   HH Q  Q
Sbjct: 29  PKFPPSEEYNQNSYIPPGGDFFGNHHIQQQQ 59


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 78  FKHENPIKFSTL*FVLRRACV 16
           F ++ P+ F  + F+L  AC+
Sbjct: 156 FDYKQPVVFDLVYFILAFACI 176


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 357 HYWQRFILLPLEQATQYTVIRP 422
           H++  F L PL+      V+RP
Sbjct: 311 HFYCAFSLYPLKSTFYLNVVRP 332


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = +2

Query: 452 FYPSRTGPAFGRTKTSTPKLLPPYEVKISS 541
           F+P +  P    + +STP  LP      S+
Sbjct: 64  FHPWKKSPQGAPSPSSTPSSLPTQRTSTSN 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,855
Number of Sequences: 336
Number of extensions: 4149
Number of successful extensions: 13
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)