Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20156
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical p... 32 0.35
Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical p... 32 0.35
Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical pr... 32 0.35
Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical pr... 32 0.35
AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein. 32 0.35
AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein. 32 0.35
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 30 1.4
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 29 2.5
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 29 3.3
Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical pr... 28 5.7
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.7
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical pr... 28 7.6
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 28 7.6
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 28 7.6
U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly glu... 28 7.6
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 28 7.6
AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans Prion-like-(q... 28 7.6
>Z46266-13|CAA86418.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 TPSSIPQR-QPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGL--SCYHSSKRLSTP 411
TPS IPQ QPQ++ +S+HV Q +RR + + ++ L SC H S +P
Sbjct: 3 TPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQRDQRNENASIRKRLSRSCDHLSDHNFSP 62
Query: 412 SSG--RKSPRQKLHCFLSI 462
R+ P + + LS+
Sbjct: 63 RLPPIRRKPTKHVPSTLSL 81
>Z46266-12|CAA86415.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 TPSSIPQR-QPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGL--SCYHSSKRLSTP 411
TPS IPQ QPQ++ +S+HV Q +RR + + ++ L SC H S +P
Sbjct: 125 TPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQRDQRNENASIRKRLSRSCDHLSDHNFSP 184
Query: 412 SSG--RKSPRQKLHCFLSI 462
R+ P + + LS+
Sbjct: 185 RLPPIRRKPTKHVPSTLSL 203
>Z37979-4|CAA86036.1| 1137|Caenorhabditis elegans Hypothetical
protein ZK899.8d protein.
Length = 1137
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 TPSSIPQR-QPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGL--SCYHSSKRLSTP 411
TPS IPQ QPQ++ +S+HV Q +RR + + ++ L SC H S +P
Sbjct: 3 TPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQRDQRNENASIRKRLSRSCDHLSDHNFSP 62
Query: 412 SSG--RKSPRQKLHCFLSI 462
R+ P + + LS+
Sbjct: 63 RLPPIRRKPTKHVPSTLSL 81
>Z37979-3|CAA86033.1| 1259|Caenorhabditis elegans Hypothetical
protein ZK899.8c protein.
Length = 1259
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 TPSSIPQR-QPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGL--SCYHSSKRLSTP 411
TPS IPQ QPQ++ +S+HV Q +RR + + ++ L SC H S +P
Sbjct: 125 TPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQRDQRNENASIRKRLSRSCDHLSDHNFSP 184
Query: 412 SSG--RKSPRQKLHCFLSI 462
R+ P + + LS+
Sbjct: 185 RLPPIRRKPTKHVPSTLSL 203
>AB011280-1|BAA24960.1| 1120|Caenorhabditis elegans GAP-2-4 protein.
Length = 1120
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 TPSSIPQR-QPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGL--SCYHSSKRLSTP 411
TPS IPQ QPQ++ +S+HV Q +RR + + ++ L SC H S +P
Sbjct: 3 TPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQRDQRNENASIRKRLSRSCDHLSDHNFSP 62
Query: 412 SSG--RKSPRQKLHCFLSI 462
R+ P + + LS+
Sbjct: 63 RLPPIRRKPTKHVPSTLSL 81
>AB011279-1|BAA24959.1| 594|Caenorhabditis elegans GAP-2-3 protein.
Length = 594
Score = 32.3 bits (70), Expect = 0.35
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +1
Query: 241 TPSSIPQR-QPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGL--SCYHSSKRLSTP 411
TPS IPQ QPQ++ +S+HV Q +RR + + ++ L SC H S +P
Sbjct: 125 TPSPIPQEYQPQANYSSRHVHFAQSQSRRPFQRDQRNENASIRKRLSRSCDHLSDHNFSP 184
Query: 412 SSG--RKSPRQKLHCFLSI 462
R+ P + + LS+
Sbjct: 185 RLPPIRRKPTKHVPSTLSL 203
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/57 (31%), Positives = 22/57 (38%)
Frame = +3
Query: 84 QHDGATNIPDN*RSNFGAHSQTASSAFRLLPPGGHADHSSPHGPDGLRSGRCNSIIH 254
+H G + P R + G H + S GGH H S G G R G S H
Sbjct: 224 EHRGRSGSPGGRRGHGGRHGSRSGSPGGRHGHGGHGGHGSRSGSPGGRHGHGGSGHH 280
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +1
Query: 154 VQLSDSYLPVAMQIIAHLTDQMAFEVDDVTPSSIPQRQPQSHQNSQHVPTNQDFTRRHHH 333
++LSD L + Q+ A Q + V + + PQS+ N Q+VP N H
Sbjct: 574 IELSDPPLSITPQV-AQEPVQTTIMSNRVIKTPSSETHPQSYANVQYVPMNPSLPVSSHS 632
Query: 334 QASQTDST 357
+ SQ ST
Sbjct: 633 E-SQVRST 639
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element on
autosome protein2 protein.
Length = 1758
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +1
Query: 247 SSIPQRQPQSHQNSQHVPTNQDFTRRHHHQA---SQTDSTITGNGLSCYHSSKRLSTPSS 417
S + +Q Q Q QHV Q+ +HHHQ Q GN + + ++ +
Sbjct: 1031 SQMNYQQVQQVQQVQHVQQQQNLQNQHHHQQQHHQQNQQQAPGNRSRSHSNVGKMEQEAQ 1090
Query: 418 GRKSP 432
+ SP
Sbjct: 1091 RQGSP 1095
>Z70287-8|CAA94301.2| 1717|Caenorhabditis elegans Hypothetical protein
R09E10.7 protein.
Length = 1717
Score = 28.3 bits (60), Expect = 5.7
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +1
Query: 244 PSSIPQRQPQSHQNSQHVPTNQDFTRRHHHQASQTDSTITGNGLSCYHSSKRLSTPSSGR 423
PS+ R S NS + TN++ H H D + G +S SS + S R
Sbjct: 1086 PSNEDARSSSSSDNSGY--TNRNSGSTHSHSTESIDDSQPGPSMSTTDSSATKKSNSIVR 1143
Query: 424 KSPRQKLHCFLS 459
K PR++ + LS
Sbjct: 1144 K-PRRRTNRSLS 1154
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +2
Query: 461 SRTGPAFGRTKTSTPKLLPPYEVKISSRSDGFVIDEDLTDDSLQYLTDDVKELIKIARNP 640
S TG T+ S+P ++PPY +S D T +L +D +++ ++ R+P
Sbjct: 758 SITGSTRHPTRGSSPSIIPPYATAPTSSPDKKPTTIPPTFPTLSVDSDGIQQELRTTRSP 817
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 289 QHVPTNQDFTRRHHHQASQTDSTITGN 369
QH T+ D HHH S T T N
Sbjct: 355 QHSITHHDHDHHHHHHESHVTHTFTSN 381
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 289 QHVPTNQDFTRRHHHQASQTDSTITGN 369
QH T+ D HHH S T T N
Sbjct: 355 QHSITHHDHDHHHHHHESHVTHTFTSN 381
>Z78543-3|CAB01755.2| 772|Caenorhabditis elegans Hypothetical
protein F29G6.3a protein.
Length = 772
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 289 QHVPTNQDFTRRHHHQASQTDSTITGN 369
QH T+ D HHH S T T N
Sbjct: 355 QHSITHHDHDHHHHHHESHVTHTFTSN 381
>Z70267-3|CAA94214.1| 534|Caenorhabditis elegans Hypothetical
protein K04C1.2b protein.
Length = 534
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +1
Query: 118 NAATSVHTAKQQVQLSDSYLP-VAMQIIAHLTDQMAFEVDDVTPSSIPQRQPQSHQNSQH 294
N TS H +Q++ +D + V Q H Q + P + ++ QS ++ +
Sbjct: 336 NEETS-HPVQQEMNKTDMVIADVISQNRVHQPSQGPLHQEADAPEANRRQPRQSAESRRR 394
Query: 295 VPTNQDFTRRHHHQASQTDSTITGNGLSCYHSSKRLSTPSS 417
VP N ++ + Q + L+ H S R+ P +
Sbjct: 395 VPANPEYMTPEASEMQQPVQPVRPTLLAFEHESARVYIPEN 435
>Z70267-2|CAA94213.1| 525|Caenorhabditis elegans Hypothetical
protein K04C1.2a protein.
Length = 525
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Frame = +1
Query: 118 NAATSVHTAKQQVQLSDSYLP-VAMQIIAHLTDQMAFEVDDVTPSSIPQRQPQSHQNSQH 294
N TS H +Q++ +D + V Q H Q + P + ++ QS ++ +
Sbjct: 327 NEETS-HPVQQEMNKTDMVIADVISQNRVHQPSQGPLHQEADAPEANRRQPRQSAESRRR 385
Query: 295 VPTNQDFTRRHHHQASQTDSTITGNGLSCYHSSKRLSTPSS 417
VP N ++ + Q + L+ H S R+ P +
Sbjct: 386 VPANPEYMTPEASEMQQPVQPVRPTLLAFEHESARVYIPEN 426
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 232 DDVTPSSIPQRQPQSHQN---SQHVPTNQDFTRRHHHQASQTDST 357
D T PQ+QP +QN + H NQ + HHQ T
Sbjct: 294 DSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQHHQQMNEQRT 338
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 232 DDVTPSSIPQRQPQSHQN---SQHVPTNQDFTRRHHHQASQTDST 357
D T PQ+QP +QN + H NQ + HHQ T
Sbjct: 294 DSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQHHQQMNEQRT 338
>U39850-4|ABB51184.1| 672|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform g
protein.
Length = 672
Score = 27.9 bits (59), Expect = 7.6
Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 1/127 (0%)
Frame = +1
Query: 178 PVAMQIIAHLTDQMAFEVDDVTPSSIPQRQPQSHQN-SQHVPTNQDFTRRHHHQASQTDS 354
PVA Q+ + + P+ IP++ +S +N ++ +F +R AS
Sbjct: 69 PVARQVSTAQMKRDLEQAAVYVPTPIPKKDAKSSENRAKEKQKPMNFQKRPTSSAS---- 124
Query: 355 TITGNGLSCYHSSKRLSTPSSGRKSPRQKLHCFLSIKNRSSLWSNQDLNTKTSAAIRS*N 534
+ N + +KR++ SS R K ++KNR + D K S R +
Sbjct: 125 -VDSNDDGVHIPAKRMAHASSVPGPSRSKPPMIGAVKNRPNHTEMLDKRNKESEEKRRKD 183
Query: 535 LEQVRRL 555
+++ RL
Sbjct: 184 RDELERL 190
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Frame = +1
Query: 232 DDVTPSSIPQRQPQSHQN---SQHVPTNQDFTRRHHHQASQTDST 357
D T PQ+QP +QN + H NQ + HHQ T
Sbjct: 294 DSRTMKQTPQQQPSQYQNNVGAAHQHHNQHGQQEQHHQQMNEQRT 338
>AC006633-4|AAK68376.3| 1128|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 34,
isoform a protein.
Length = 1128
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +3
Query: 324 SSPPSVTDRFNHYWQRFILLPLEQATQYTVIRPQEPKTEASLLSIHQEQVQPLVEPRPQH 503
SS PSV Y ++ LP+ A Q T Q P+T Q+Q+Q + + Q
Sbjct: 499 SSQPSVVQAGQTYPANYMTLPMNAAAQMTQSYIQHPQTPHDYYM--QQQMQQQQQQQAQA 556
Query: 504 QN 509
Q+
Sbjct: 557 QS 558
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,356,478
Number of Sequences: 27780
Number of extensions: 392618
Number of successful extensions: 1418
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1417
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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