Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20154
         (580 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000D56971 Cluster: PREDICTED: similar to neural pre...    38   0.17 
UniRef50_A6RV15 Cluster: Putative uncharacterized protein; n=2; ...    36   0.91 
UniRef50_Q9P4R5 Cluster: Catabolite repression protein creC; n=9...    36   0.91 
UniRef50_Q53PI1 Cluster: Expressed protein; n=3; Oryza sativa|Re...    33   3.7  
UniRef50_A2FJR8 Cluster: Putative uncharacterized protein; n=1; ...    33   4.9  
UniRef50_Q9ZQD2 Cluster: Putative uncharacterized protein At2g37...    33   6.4  
UniRef50_A7S7S0 Cluster: Predicted protein; n=1; Nematostella ve...    33   6.4  
UniRef50_Q1E0U6 Cluster: Putative uncharacterized protein; n=1; ...    33   6.4  
UniRef50_Q8TD90 Cluster: Melanoma-associated antigen E2; n=12; E...    32   8.5  

>UniRef50_UPI0000D56971 Cluster: PREDICTED: similar to neural
           precursor cell expressed, developmentally down-regulated
           1; n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           neural precursor cell expressed, developmentally
           down-regulated 1 - Tribolium castaneum
          Length = 535

 Score = 37.9 bits (84), Expect = 0.17
 Identities = 21/60 (35%), Positives = 29/60 (48%)
 Frame = +1

Query: 241 GSATCISWSDDSKYILQVNSKGLVEILSAADHDVRSLQHLSLKDSWCASFHRDGHRNIAV 420
           G    ISWS D  ++  V   GL EI+S  D         S+++  CASF     +NIA+
Sbjct: 32  GPIRSISWSKDGNWLALVPYSGLAEIISIKDQLKLIHTIQSIEEPSCASFQNTTKKNIAI 91


>UniRef50_A6RV15 Cluster: Putative uncharacterized protein; n=2;
           Sclerotiniaceae|Rep: Putative uncharacterized protein -
           Botryotinia fuckeliana B05.10
          Length = 576

 Score = 35.5 bits (78), Expect = 0.91
 Identities = 15/31 (48%), Positives = 17/31 (54%)
 Frame = +1

Query: 241 GSATCISWSDDSKYILQVNSKGLVEILSAAD 333
           G  TC+ WS D KY+L      LV I S AD
Sbjct: 371 GGLTCVCWSPDGKYVLSGGQDDLVSIWSMAD 401


>UniRef50_Q9P4R5 Cluster: Catabolite repression protein creC; n=9;
           Eurotiomycetidae|Rep: Catabolite repression protein creC
           - Emericella nidulans (Aspergillus nidulans)
          Length = 630

 Score = 35.5 bits (78), Expect = 0.91
 Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
 Frame = +1

Query: 190 TL*LFNVGTEKVLRMLR---GSATCISWSDDSKYILQVNSKGLVEILSAADHDVRSLQHL 360
           TL L +   E+VL + R   G  TC+ WS D KYI+      LV I S  +  +  +   
Sbjct: 390 TLRLMDYLQEEVLDVFRSYYGGFTCVCWSPDGKYIVTGGQDDLVTIWSLPERKI--IARC 447

Query: 361 SLKDSWCASFHRDGHR 408
              DSW ++   D  R
Sbjct: 448 QGHDSWVSAVAFDPWR 463


>UniRef50_Q53PI1 Cluster: Expressed protein; n=3; Oryza sativa|Rep:
           Expressed protein - Oryza sativa subsp. japonica (Rice)
          Length = 522

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 21/69 (30%), Positives = 31/69 (44%)
 Frame = +1

Query: 241 GSATCISWSDDSKYILQVNSKGLVEILSAADHDVRSLQHLSLKDSWCASFHRDGHRNIAV 420
           G+  C SWS D KY+L      LV++ S   HD + +       SW ++   D + +   
Sbjct: 266 GALLCCSWSTDGKYLLSGGEDDLVQVWSM--HDRKMVAWGEGHKSWVSAVAFDSYWSPPK 323

Query: 421 DQER*CNDM 447
             ER  N M
Sbjct: 324 PYERKQNSM 332


>UniRef50_A2FJR8 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 433

 Score = 33.1 bits (72), Expect = 4.9
 Identities = 19/65 (29%), Positives = 30/65 (46%)
 Frame = +1

Query: 235 LRGSATCISWSDDSKYILQVNSKGLVEILSAADHDVRSLQHLSLKDSWCASFHRDGHRNI 414
           +RG + CI++S D + I    +   + I  A   DV+    +  KD     F RDG   I
Sbjct: 176 IRGDSRCIAFSRDDQMIAVSYNDNYIAIFDANTGDVKKKLRMHTKDVSSLLFTRDGKYMI 235

Query: 415 AVDQE 429
           +  Q+
Sbjct: 236 SSGQD 240


>UniRef50_Q9ZQD2 Cluster: Putative uncharacterized protein
           At2g37160; n=1; Arabidopsis thaliana|Rep: Putative
           uncharacterized protein At2g37160 - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 444

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
 Frame = +1

Query: 199 LFNVGTEKVL---RMLRGSATCISWSDDSKYILQVNSKGLVEILSAADHDV 342
           +F+  T+K++   +   G+  C +WS D KY+L      LV++ S  D  V
Sbjct: 241 IFDFSTQKLVCGVKSYYGALLCCAWSMDGKYLLTGGEDDLVQVWSMEDRKV 291


>UniRef50_A7S7S0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 516

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +1

Query: 223 VLRMLRGSATCISWSDDSKYILQVNSKGLVEILSAADHDVRSLQHLSLKDSW 378
           V++   G  TC+ WS D KY++      L+ + S   H++R +       SW
Sbjct: 255 VMKSYFGGLTCVCWSPDGKYVVTGGEDDLITVWSF--HELRVIARGQGHQSW 304


>UniRef50_Q1E0U6 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 1253

 Score = 32.7 bits (71), Expect = 6.4
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = +1

Query: 205 NVGTEKVLRMLRGSATCISWSDDSKYILQVNSKGL 309
           N G + VL    GS + I WS   KYI+ VN +G+
Sbjct: 272 NNGKDTVLHSGEGSISAIKWSLSGKYIVWVNEEGI 306


>UniRef50_Q8TD90 Cluster: Melanoma-associated antigen E2; n=12;
           Eutheria|Rep: Melanoma-associated antigen E2 - Homo
           sapiens (Human)
          Length = 523

 Score = 32.3 bits (70), Expect = 8.5
 Identities = 15/37 (40%), Positives = 23/37 (62%)
 Frame = -3

Query: 548 SLLN*YSWHCSYEVTADWCEGVGNVFMTFGSSCPISL 438
           SL++  + HCS E+TAD+ +G G +  T  S  P S+
Sbjct: 2   SLVSQNARHCSAEITADYGDGRGEIQATNASGSPTSM 38


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,013,171
Number of Sequences: 1657284
Number of extensions: 10196243
Number of successful extensions: 23565
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22891
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23562
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)