Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20149
(567 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 126 3e-30
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 124 7e-30
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 106 3e-24
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 93 2e-20
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 76 4e-15
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 60 3e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 55 8e-09
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 53 3e-08
SPBC215.10 |||haloacid dehalogenase-like hydrolase|Schizosacchar... 28 0.83
SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|ch... 28 1.1
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 27 1.9
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.4
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 3.4
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 25 5.9
SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces p... 25 5.9
SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 25 7.7
SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces p... 25 7.7
SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces... 25 7.7
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 126 bits (303), Expect = 3e-30
Identities = 60/82 (73%), Positives = 66/82 (80%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEFKRK KKD
Sbjct: 202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRL 261
Query: 190 XXXCERAKRTLSSSTQASIEID 255
CERAKRTLSSS QASIEID
Sbjct: 262 RTACERAKRTLSSSAQASIEID 283
Score = 121 bits (292), Expect = 6e-29
Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 434
SLFEGIDFYTSITRARFEEL ADLFR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIPR
Sbjct: 284 SLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPR 343
Query: 435 CRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDKSEEVQ 563
+ + + ++GAAVQAA+L GD SE+ Q
Sbjct: 344 VQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQ 387
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 124 bits (300), Expect = 7e-30
Identities = 60/82 (73%), Positives = 65/82 (79%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEFKRK KKD
Sbjct: 202 TFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRL 261
Query: 190 XXXCERAKRTLSSSTQASIEID 255
CERAKRTLSSS QASIEID
Sbjct: 262 RTACERAKRTLSSSAQASIEID 283
Score = 120 bits (290), Expect = 1e-28
Identities = 63/104 (60%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 434
SL+EGIDFYTSITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIPR
Sbjct: 284 SLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPR 343
Query: 435 CRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAILHGDKSEEVQ 563
+ + + ++GAAVQAAIL GD SE+ Q
Sbjct: 344 IQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQ 387
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 106 bits (254), Expect = 3e-24
Identities = 49/82 (59%), Positives = 58/82 (70%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEFKRK K D
Sbjct: 206 TFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEFKRKQKIDISDDPRALRRL 265
Query: 190 XXXCERAKRTLSSSTQASIEID 255
CERAKR LSS TQ ++E+D
Sbjct: 266 RSACERAKRALSSVTQTTVEVD 287
Score = 93.5 bits (222), Expect = 2e-20
Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 434
SL GIDF +SITRARFE++NA F++T++PV K L+D+K+ KA +HDIVLVGGSTRIP+
Sbjct: 288 SLSNGIDFSSSITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPK 347
Query: 435 CRSSCKISLMERSSTNLLTLTRR-SFGAAVQAAIL 536
+ R+ + ++GAAVQAA+L
Sbjct: 348 VQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVL 382
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 93.5 bits (222), Expect = 2e-20
Identities = 43/101 (42%), Positives = 70/101 (69%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 434
S F G DF +++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I DIVLVGGSTRIP+
Sbjct: 316 SFFNGQDFSETLSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPK 375
Query: 435 CRSSCKISLMERSSTNLLTLTRRSFGAAVQAAILHGDKSEE 557
+ + +++S + ++GAAVQA +L G++ +
Sbjct: 376 VQELLESFFGKKASKGINPDEAVAYGAAVQAGVLSGEEGSD 416
Score = 87.0 bits (206), Expect = 2e-18
Identities = 40/82 (48%), Positives = 54/82 (65%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + + RK D
Sbjct: 234 TFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTYNRKNNVDVTKDLKAMGKL 293
Query: 190 XXXCERAKRTLSSSTQASIEID 255
E+AKRTLSS IEI+
Sbjct: 294 KREVEKAKRTLSSQKSVRIEIE 315
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 75.8 bits (178), Expect = 4e-15
Identities = 39/101 (38%), Positives = 55/101 (54%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXX 189
TFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ FK+ D
Sbjct: 246 TFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETFKKNEGLDLSKDRLAVQRI 305
Query: 190 XXXCERAKRTLSSSTQASIEIDLSLRVLTSTRQLLVLASRS 312
E+AK LSS ++ I + T + + + SR+
Sbjct: 306 REAAEKAKCELSSLSKTDISLPFITADATGPKHINMEISRA 346
Score = 62.1 bits (144), Expect = 6e-11
Identities = 29/85 (34%), Positives = 53/85 (62%)
Frame = +3
Query: 288 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRCRSSCKISLME 467
I+RA+FE+L L R T++P +++L+DA + ++I++++LVGG TR+PR + K
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFKR 402
Query: 468 RSSTNLLTLTRRSFGAAVQAAILHG 542
+ ++ + GAA+Q +L G
Sbjct: 403 EPAKSVNPDEAVAIGAAIQGGVLSG 427
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 59.7 bits (138), Expect = 3e-10
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +1
Query: 4 HETFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXX 183
H + VSI+ G F +KST D +LG + D ++++F EFK KYK D
Sbjct: 208 HSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKIDVLSNPKATF 267
Query: 184 XXXXXCERAKRTLSSSTQASIEIDL 258
ER K+ LS++ A + +++
Sbjct: 268 RLATAVERLKKVLSANANAPLNVEM 292
Score = 43.6 bits (98), Expect = 2e-05
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 258 LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIP 431
+ ID + I R+ FEEL L P+EK+L A + K ++ I +VGG TR+P
Sbjct: 293 IMNDIDASSFIKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSIEMVGGCTRVP 350
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 54.8 bits (126), Expect = 8e-09
Identities = 31/95 (32%), Positives = 57/95 (60%)
Frame = +3
Query: 258 LFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPRC 437
L +GIDF ITR+ E L D+ + +EP+ K+L+ A + ++I+ I+L GG++RIP
Sbjct: 321 LADGIDFRLKITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINSIILFGGASRIPFI 380
Query: 438 RSSCKISLMERSSTNLLTLTRRSFGAAVQAAILHG 542
+S +L + S++ ++ + A+V+ A +G
Sbjct: 381 QS----TLADYVSSDKISKNVNADEASVKGAAFYG 411
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 52.8 bits (121), Expect = 3e-08
Identities = 25/80 (31%), Positives = 43/80 (53%)
Frame = +1
Query: 16 DVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKDXXXXXXXXXXXXX 195
+VS+++++ G+ + ++ D +LGGE + +VN F +EF++K D
Sbjct: 230 EVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGIDPRKNARSLAKLRA 289
Query: 196 XCERAKRTLSSSTQASIEID 255
CE KR LS+ T AS +D
Sbjct: 290 QCEITKRVLSNGTTASAAVD 309
Score = 43.6 bits (98), Expect = 2e-05
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 10/110 (9%)
Frame = +3
Query: 255 SLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPR 434
SL +GIDF++SI R R++ + + V +++ A M+ I +++L GG++ P+
Sbjct: 310 SLADGIDFHSSINRLRYDLAASATLNRMADLVTEAVEKANMEPFDISEVILAGGASNTPK 369
Query: 435 CRSSCKISLME----RSSTNLLTL-----TRRSFGAAVQAAIL-HGDKSE 554
S + E RSS+++ L + G+ VQA+++ H D ++
Sbjct: 370 LTSLMESIFPEQTIIRSSSSVTPLQLDPSELTAIGSGVQASLIGHFDAAD 419
>SPBC215.10 |||haloacid dehalogenase-like
hydrolase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 302
Score = 28.3 bits (60), Expect = 0.83
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 NTKRTSLPTRELLGVCVLHVRGQR-GPCHRPHKRALR 250
N K+ LP E + + + V G GP H+PH R LR
Sbjct: 9 NQKKNVLPKPEDIQLIICDVDGTLLGPDHKPHPRNLR 45
>SPBC2G2.12 |||histidine-tRNA ligase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 538
Score = 27.9 bits (59), Expect = 1.1
Identities = 18/55 (32%), Positives = 28/55 (50%)
Frame = +3
Query: 249 DRSLFEGIDFYTSITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLVG 413
D SL G+D+YT I E +A +S+ E +K D + D++ D + VG
Sbjct: 329 DMSLARGLDYYTGIIYEAVTEASAPKIKSSAE--KKKSADPEADRSN-DDSIGVG 380
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 27.1 bits (57), Expect = 1.9
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 5 TRPSTCPSLPSRMVSSR*NPPPATPTWEVR--TLTIAWSTTLSRS 133
+RP T S P S NPP + P +V + T+A ST+ +++
Sbjct: 73 SRPKTSTSTPKSAASPAPNPPASVPEKKVEAPSSTVAESTSTTQT 117
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.4
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1
Query: 396 RGFEPYPSWHHGETSPLAP 340
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 3.4
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 137 LNSWTKWLTMRLSKSSPPKWVSPAVDF 57
LN K++ SK P W+SPA DF
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDF 282
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 25.4 bits (53), Expect = 5.9
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -2
Query: 101 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKV 9
+KSSP K VSP V SK +S V + S +
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSI 233
>SPAC9.10 |||amino acid permease, unknown 2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 591
Score = 25.4 bits (53), Expect = 5.9
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Frame = +1
Query: 322 ICSGLPWSQ----WRSLSVMPRWIRLKSTILYWW 411
ICS LP + W + S PR+ R S ++ WW
Sbjct: 133 ICSALPAAGSIYLWAAESAGPRFGRFVSFLVAWW 166
>SPBC947.10 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 676
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +1
Query: 10 TFDVSILTIEDGIFEVKSTAGDTHL 84
TF I DG+FE GD+HL
Sbjct: 48 TFPTEIWETRDGLFEEPVGKGDSHL 72
>SPAC56E4.04c |cut6||acetyl-CoA carboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2280
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 398 YCTGGWLHSYPKVQKLLQDFFNGKELNKSINPDE 499
Y G +H Y ++ LL++++N ++L IN E
Sbjct: 924 YKDGLKVHEYNVIKGLLEEYYNVEKLFSGINKRE 957
>SPCC74.04 |||amino acid permease, unknown 15|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 557
Score = 25.0 bits (52), Expect = 7.7
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -3
Query: 253 LSQCSLVWTMTRSSLPSHMQYANA 182
+S C ++WTM+ P HM A
Sbjct: 265 MSFCGVIWTMSGYDAPFHMSEETA 288
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,546,571
Number of Sequences: 5004
Number of extensions: 53116
Number of successful extensions: 208
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 240047038
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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