Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20146
         (634 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    25   1.5  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   2.0  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.6  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    24   3.5  
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   3.5  
AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P...    24   4.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   6.1  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 625 PGPGTERRPSIPRSGYGRSG 566
           PGPG + R S P +G  RSG
Sbjct: 230 PGPGEKARRSDPAAGCPRSG 249


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 422 HPNLILGGTYSGQIVLWDNRVQKR 493
           HPN++LGG ++     W +   KR
Sbjct: 113 HPNVVLGGDFNAWHEAWGSARTKR 136


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +3

Query: 486 KSEPRCSAAAVLGRAHSPGVLP-VGDRKPER 575
           +S    SA  ++ R H+PG  P + D K +R
Sbjct: 815 RSVSHVSAVTIMSRTHAPGDAPHIADVKEQR 845


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 219 SVPPRRYEPGKDGP 178
           S+PPRR   GK GP
Sbjct: 240 SIPPRRQMTGKPGP 253


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 24.2 bits (50), Expect = 3.5
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 219 SVPPRRYEPGKDGP 178
           S+PPRR   GK GP
Sbjct: 247 SIPPRRQMTGKPGP 260


>AY183375-1|AAO24765.1|  679|Anopheles gambiae NADPH cytochrome P450
           reductase protein.
          Length = 679

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 406 HVCEVPP*LDPRRH 447
           HVCE+ P L PR H
Sbjct: 446 HVCELLPRLQPRYH 459


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 508 PPLSSVAHTHPVYCLSVIGSQNAHNLISVSTDGALF 615
           P +S+V       C   +     HNL+ +STD  LF
Sbjct: 224 PYVSTVPKNLREPCPGCVAPYGYHNLMPLSTDANLF 259


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,562
Number of Sequences: 2352
Number of extensions: 14022
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)