Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20146
(634 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 24 1.1
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.3
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.3
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.3
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.3
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.3
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 7.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.5
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 7.5
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 21 9.9
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 21 9.9
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 21 9.9
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = +1
Query: 361 HSRRH--IPLSVGGYERHVCEV 420
H +RH I LS G Y R CE+
Sbjct: 193 HRQRHSTIHLSTGNYSRLACEI 214
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 278 LASYYNSDDAPHDPDGVCLVWNTKFKKTT 364
L Y+NSDD+ H ++ KF K T
Sbjct: 213 LIVYHNSDDSFHRLTSNTFDYDPKFTKMT 241
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 278 LASYYNSDDAPHDPDGVCLVWNTKFKKTT 364
L Y+NSDD+ H ++ KF K T
Sbjct: 213 LIVYHNSDDSFHRLTSNTFDYDPKFTKMT 241
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 278 LASYYNSDDAPHDPDGVCLVWNTKFKKTT 364
L Y+NSDD+ H ++ KF K T
Sbjct: 213 LIVYHNSDDSFHRLTSNTFDYDPKFTKMT 241
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.3
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -3
Query: 293 CSKRPAPVPGETWPVQTGHAPSARPAFLLEGTNQGKTGR*LVVKSV 156
C + P P W QTG + P +L G G L +++V
Sbjct: 259 CVAQACPTPEYRWYAQTG----SEPMLVLSGPRTRLLGSVLALEAV 300
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.3
Identities = 13/46 (28%), Positives = 19/46 (41%)
Frame = -3
Query: 293 CSKRPAPVPGETWPVQTGHAPSARPAFLLEGTNQGKTGR*LVVKSV 156
C + P P W QTG + P +L G G L +++V
Sbjct: 259 CVAQACPTPEYRWYAQTG----SEPMLVLSGPRTRLLGSVLALEAV 300
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/30 (33%), Positives = 12/30 (40%)
Frame = -3
Query: 533 VCATEDSGGAAPGFAFARDYPTARSVPNTC 444
+C+ G P F TA SV N C
Sbjct: 15 ICSPSVHCGTRPSFVSDEMIATAASVVNAC 44
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 7.5
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -2
Query: 504 CTGVRFCTRLSHSTICPEYVPPR 436
CT SHST VPPR
Sbjct: 658 CTAENAAGTASHSTTLTVNVPPR 680
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.4 bits (43), Expect = 7.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 6 RGELSADEKQTIMLSAEFQRFMSRAGRV 89
RGEL Q IM +R +R GRV
Sbjct: 230 RGELFYYMHQQIMARYNCERLCNRLGRV 257
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 333 WSGTPSSRRPLPKTYSTV 386
WS P+ R L +TYS +
Sbjct: 201 WSPDPAINRRLKETYSNM 218
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 333 WSGTPSSRRPLPKTYSTV 386
WS P+ R L +TYS +
Sbjct: 201 WSPDPAINRRLKETYSNM 218
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 333 WSGTPSSRRPLPKTYSTV 386
WS P+ R L +TYS +
Sbjct: 201 WSPDPAINRRLKETYSNM 218
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,676
Number of Sequences: 438
Number of extensions: 3915
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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