Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20142
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    26   0.29 
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    22   6.2  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    22   6.2  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   6.2  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   6.2  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   8.2  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 8/26 (30%), Positives = 18/26 (69%)
 Frame = +1

Query: 367 VMQYVTESLLMHPNVQKLLLDTDQTF 444
           + +++ +  ++HPN+ KL LDT + +
Sbjct: 154 IRRFLIKVTILHPNIVKLKLDTSEGY 179


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 143 GKSHMILGEGYVRLLLEANHD 205
           GK+  + G+GY  + L AN D
Sbjct: 457 GKTITVGGDGYADISLGANED 477


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 143 GKSHMILGEGYVRLLLEANHD 205
           GK+  + G+GY  + L AN D
Sbjct: 458 GKTITVGGDGYADISLGANED 478


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 143 GKSHMILGEGYVRLLLEANHD 205
           GK+  + G+GY  + L AN D
Sbjct: 458 GKTITVGGDGYADISLGANED 478


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 379 HIALRYTCDSYLIDRLLC 326
           HI L    D YL+++L+C
Sbjct: 92  HIQLPKHVDQYLLEQLVC 109


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 65  MLRAIILCLILVTC 106
           M   IILCL+  TC
Sbjct: 1   MFDKIILCLVYATC 14


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,014
Number of Sequences: 336
Number of extensions: 3851
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)