Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20142
(769 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical ... 40 0.001
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 35 0.073
Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical p... 34 0.097
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 33 0.17
Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical pr... 33 0.30
U88311-5|AAB42343.1| 531|Caenorhabditis elegans Udp-glucuronosy... 32 0.52
U40959-5|AAA81769.1| 531|Caenorhabditis elegans Udp-glucuronosy... 32 0.52
Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 0.90
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 0.90
AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical ... 31 0.90
U97009-12|ABR92602.1| 532|Caenorhabditis elegans Udp-glucuronos... 31 1.2
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 31 1.2
U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical pr... 30 1.6
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 30 1.6
Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical pr... 29 2.8
U88311-2|AAB42350.2| 529|Caenorhabditis elegans Udp-glucuronosy... 29 2.8
AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical ... 29 2.8
Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical ... 29 3.6
AF022972-4|AAC48236.2| 528|Caenorhabditis elegans Udp-glucurono... 29 4.8
X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin pr... 28 6.4
U55369-2|AAK52183.2| 526|Caenorhabditis elegans Udp-glucuronosy... 28 6.4
U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone... 28 6.4
U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone... 28 6.4
U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone... 28 6.4
U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone... 28 6.4
U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone... 28 6.4
AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin ... 28 6.4
AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear recep... 28 6.4
AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear recep... 28 6.4
AF067950-1|AAG24154.1| 361|Caenorhabditis elegans Serpentine re... 28 6.4
>AC024759-6|AAP13761.1| 527|Caenorhabditis elegans Hypothetical
protein Y37E11AR.5 protein.
Length = 527
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/53 (39%), Positives = 28/53 (52%)
Frame = +2
Query: 80 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 238
+L +L S YK+L P G SHM +L+EA HDVT+L P + I
Sbjct: 7 LLLFVLPAASCYKILVSVPKFGFSHMQTMGKLADILVEAGHDVTFLMPVDVPI 59
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.073
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+L A++L ++ S YK+L G SH+ V L++A HDVT + P
Sbjct: 3 LLSALLLQILFNVSSPYKILVYSNLFGHSHIKFVGSVVDTLVDAGHDVTVVLP 55
>Z75554-10|CAA99956.1| 535|Caenorhabditis elegans Hypothetical
protein ZC455.5a protein.
Length = 535
Score = 34.3 bits (75), Expect = 0.097
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +2
Query: 77 IILCLILVT-CSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK--IGHP 247
++L +LV+ +YK L + P G SHM L + H VTY P ++ + H
Sbjct: 7 VLLFSVLVSHVESYKFLVISPVYGYSHMKFMAIIANQLADEGHQVTYFQPFVIEAYLDHK 66
Query: 248 KLNRSM 265
LN S+
Sbjct: 67 LLNNSL 72
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +2
Query: 77 IILCLILVTCS-AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
++ CL CS +Y L P G SH L A H+VT+ TP
Sbjct: 10 LLFCLFFALCSDSYNFLVFCPLFGHSHTTFFAKIADTLTYAGHNVTFFTP 59
>Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical
protein C44H9.1 protein.
Length = 534
Score = 32.7 bits (71), Expect = 0.30
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Frame = +2
Query: 77 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK-----IG 241
+ L L+ + CS YK+L P G SH +L++A HDVT L P ++ +G
Sbjct: 7 LTLLLLELVCS-YKVLVFNPAFGASHSNFLGKISDILIDAGHDVTMLIPVCMESKKDLVG 65
Query: 242 HPKLNRSMYL--QPKRVLISMACSTLRS*LTKKSIYQI 349
K+ + + + +P+ L+ T + KK I+++
Sbjct: 66 SKKVKKIIRIDQEPRSKLMQEEAKTEE--MIKKQIWKL 101
>U88311-5|AAB42343.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein25 protein.
Length = 531
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+++++ + L ++ +A+ +L P G SH L EA H+VT++ P
Sbjct: 2 IIQSVFILLSVINVNAFNILVYSPSFGGSHTNFMARLADTLTEAGHNVTFVVP 54
>U40959-5|AAA81769.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein46 protein.
Length = 531
Score = 31.9 bits (69), Expect = 0.52
Identities = 23/78 (29%), Positives = 34/78 (43%)
Frame = +2
Query: 77 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKIGHPKLN 256
++L + +YK+L P KSH+I L A HDVT L L G +
Sbjct: 6 VLLATFVNAAFSYKILVFSPATSKSHLISNGRLADELARAGHDVTVLELDFL--GISQTT 63
Query: 257 RSMYLQPKRVLISMACST 310
S+ + KR++ ST
Sbjct: 64 NSVKVAKKRIIDGFQEST 81
>Z50006-2|CAD44148.1| 523|Caenorhabditis elegans Hypothetical
protein T07C5.1c protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 107 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 238
+A K+L P KSH++L Y LL A HD P+ K+
Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKL 67
>Z50006-1|CAA90301.1| 190|Caenorhabditis elegans Hypothetical
protein T07C5.1b protein.
Length = 190
Score = 31.5 bits (68), Expect = 0.68
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 107 SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLKI 238
+A K+L P KSH++L Y LL A HD P+ K+
Sbjct: 24 NAAKILVYCPSISKSHVLLCSKYADLLHNAGHDTVLFIPSYSKL 67
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 80 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 235
IL I+ ++YK+L P G SH +L++A HDVT L P ++
Sbjct: 10 ILFSIIDYSNSYKVLVFNPAFGASHSNFLGKISDILIDAGHDVTMLIPIAMQ 61
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 31.1 bits (67), Expect = 0.90
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 80 ILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 235
IL I+ ++YK+L P G SH +L++A HDVT L P ++
Sbjct: 10 ILFSIIDYSNSYKVLVFNPAFGASHSNFLGKISDILIDAGHDVTMLIPIAMQ 61
>AF022972-7|AAM29671.1| 124|Caenorhabditis elegans Hypothetical
protein F10D2.8 protein.
Length = 124
Score = 31.1 bits (67), Expect = 0.90
Identities = 19/49 (38%), Positives = 23/49 (46%)
Frame = +2
Query: 77 IILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+IL LI T S Y L P G SH L +A H+VT+ TP
Sbjct: 6 VILSLIYSTYS-YNFLVFCPLFGHSHTKFFATIADALTDAGHNVTFFTP 53
>U97009-12|ABR92602.1| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform b protein.
Length = 532
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +3
Query: 483 FWVFNCLQLPFIWSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPPYTFLERVEELWNIA 662
F++ + L++P I S P+I YFP S + P FL+R+ +L+ I
Sbjct: 154 FYIADLLEIPSIPLMSAVRLPIIDSAFGQPSILGYFPQQYSKVAPEAGFLDRLNDLYRIF 213
Query: 663 KTLYNRWRLKEKKKVFTRMRLDQPL 737
RL + + F + + P+
Sbjct: 214 FWNLTTQRLCQFQNDFIQKAIGHPV 238
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/85 (24%), Positives = 37/85 (43%)
Frame = +3
Query: 483 FWVFNCLQLPFIWSSSLEPHPMILRLIDSLPNPAYFPDHTSSLEPPYTFLERVEELWNIA 662
F++ + L++P I S P+I YFP S + P FL+R+ +L+ I
Sbjct: 155 FYIADLLEIPSIPLMSAVRLPIIDSAFGQPSILGYFPQQYSKVAPEAGFLDRLNDLYRIF 214
Query: 663 KTLYNRWRLKEKKKVFTRMRLDQPL 737
RL + + F + + P+
Sbjct: 215 FWNLTTQRLCQFQNDFIQKAIGHPV 239
>U39851-2|AAF99874.1| 540|Caenorhabditis elegans Hypothetical
protein C23G10.6 protein.
Length = 540
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 65 MLRAIILCLILVTCS-AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
M+R +L L L+ + +L + P G SHM L EA H+VT+L P
Sbjct: 41 MIRLHLLFLFLINQTLTINVLVLSPAFGGSHMNFMAHLADTLTEAGHNVTFLIP 94
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 226 STKDWSSKIKQIDVSSTEKGFDF-DGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
ST W++ ++ + + T G D LF I + D++D YIV+ + SL+
Sbjct: 71 STVLWNADMELVLANKTIDGPPKRDILFVVSTFIGVDADINDRYSWYIVIYTLVGSLVYG 130
Query: 403 PNVQKLLLDTDQTFDAVI 456
NV + +L TDQ + +
Sbjct: 131 WNVLRFVLWTDQKLEGFL 148
>Z75554-3|CAA99955.2| 533|Caenorhabditis elegans Hypothetical
protein ZC455.4 protein.
Length = 533
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +2
Query: 110 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+YK L + P G SHM L A +DVTY P
Sbjct: 19 SYKFLVISPVYGFSHMKYMAELANHLARAGNDVTYFQP 56
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2
Query: 110 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYL 217
AYK+L P KSH+I L +A H+VT L
Sbjct: 21 AYKILVFSPATSKSHLISNGRIADELAKAGHNVTLL 56
>Z68493-4|CAA92791.1| 520|Caenorhabditis elegans Hypothetical
protein C33A12.6 protein.
Length = 520
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+L IL I+ S+YK+L G SH+ + +L +A ++VT L P
Sbjct: 4 LLNIFILTSIISCVSSYKILLYSNLFGHSHVKVLAAAADILTDAGNNVTVLMP 56
>U88311-2|AAB42350.2| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein26 protein.
Length = 529
Score = 29.5 bits (63), Expect = 2.8
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 5/68 (7%)
Frame = +2
Query: 65 MLRAIILCLILVTC-----SAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAP 229
M+R ++ + LV C S+ +L P SH L EA H+VT+L P
Sbjct: 1 MIRMSVVSISLVLCTLSLVSSLNILVHSPAYAASHTNFMARLADTLTEAGHNVTFLVPIA 60
Query: 230 LKIGHPKL 253
L+ KL
Sbjct: 61 LEERRDKL 68
>AC024799-5|AAO25979.1| 474|Caenorhabditis elegans Hypothetical
protein Y49C4A.8b protein.
Length = 474
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+L ++I L+ + S+ +L P SH L E H+VTYL P
Sbjct: 2 LLNSLIFTLLFCSSSSLNILVYSPAYAASHSNFLGKLADTLTERGHNVTYLMP 54
>AC024799-4|AAK72318.1| 536|Caenorhabditis elegans Hypothetical
protein Y49C4A.8a protein.
Length = 536
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+L ++I L+ + S+ +L P SH L E H+VTYL P
Sbjct: 2 LLNSLIFTLLFCSSSSLNILVYSPAYAASHSNFLGKLADTLTERGHNVTYLMP 54
>Z71177-8|CAA94866.2| 525|Caenorhabditis elegans Hypothetical
protein AC3.2 protein.
Length = 525
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDV 208
M + L L L+ A K+L P +SH+I L++A HDV
Sbjct: 1 MYTFLFLLLSLLAVDAGKILVYSPSISRSHLISNGRIADALVDAGHDV 48
>AF022975-1|AAB70675.3| 587|Caenorhabditis elegans Hypothetical
protein K09C6.7 protein.
Length = 587
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +3
Query: 579 PAYF---PDHTSSLEPPYTFLERVEELWNIAKTLYNRWRLKEKKK 704
PAYF P+ +S + P+ + W I K Y+RW KE++K
Sbjct: 11 PAYFRKKPEKKTS-DCPHDKFSAEKAKWRIVKRKYDRWIEKERQK 54
>AF022972-4|AAC48236.2| 528|Caenorhabditis elegans
Udp-glucuronosyltransferase protein37 protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 110 AYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTPAPLK 235
+Y L P G SH L EA H+VT+ TP ++
Sbjct: 16 SYNFLIFSPLFGHSHTTFFAKIADTLSEAGHNVTFFTPTIIR 57
>X59589-1|CAA42159.1| 395|Caenorhabditis elegans calreticulin
protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 515 KWKLKTVENPEYKSLYIHSTI 453
+WK K ++NP YK +IH I
Sbjct: 269 EWKPKQIKNPAYKGKWIHPEI 289
>U55369-2|AAK52183.2| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein48 protein.
Length = 526
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/53 (28%), Positives = 23/53 (43%)
Frame = +2
Query: 65 MLRAIILCLILVTCSAYKLLAVFPFPGKSHMILGEGYVRLLLEANHDVTYLTP 223
+LR + + +++K+L P KSHMI L A H+V P
Sbjct: 2 LLRILTFLAVCQVTTSHKILMFSPTASKSHMISQGRIADELANAGHEVVNFEP 54
>U23518-8|AAO38654.1| 400|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform b protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396
>U23518-7|AAO38655.1| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform c protein.
Length = 440
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 400 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 436
>U23518-6|AAD31548.2| 446|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform d protein.
Length = 446
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 406 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 442
>U23518-5|AAO38653.1| 448|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform a protein.
Length = 448
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 408 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 444
>U23518-4|ABB88231.1| 450|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 21, isoform e protein.
Length = 450
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 410 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 446
>AF125963-7|AAD14746.1| 395|Caenorhabditis elegans Calreticulin
protein 1 protein.
Length = 395
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 515 KWKLKTVENPEYKSLYIHSTI 453
+WK K ++NP YK +IH I
Sbjct: 269 EWKPKQIKNPAYKGKWIHPEI 289
>AF083234-1|AAD03692.1| 400|Caenorhabditis elegans nuclear receptor
NHR-21b protein.
Length = 400
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 360 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 396
>AF083233-1|AAD03691.1| 458|Caenorhabditis elegans nuclear receptor
NHR-21a protein.
Length = 458
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 292 FDGLFNFKKLINKEVDLSDTNHKYIVMQYVTESLLMH 402
F + N K L + ++LSD H V Q +TE+ +H
Sbjct: 418 FSSITNLKYLTSDNIELSDVLHVMEVDQLITEAFDVH 454
>AF067950-1|AAG24154.1| 361|Caenorhabditis elegans Serpentine
receptor, class w protein141 protein.
Length = 361
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = +3
Query: 609 LEPPYTFLERVEELWNIAKTLYNRWRLKEKKKV 707
L P TFL V+ELW K NRWRL KKV
Sbjct: 235 LFPVVTFL-LVKELW---KNENNRWRLLSSKKV 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,807,092
Number of Sequences: 27780
Number of extensions: 357038
Number of successful extensions: 956
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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