Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20138
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 195 3e-50
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 195 3e-50
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 128 5e-30
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 128 5e-30
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 126 1e-29
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 126 1e-29
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 126 1e-29
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 121 4e-28
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 121 4e-28
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 121 5e-28
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 113 1e-25
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 113 1e-25
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 112 2e-25
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 74 8e-14
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 64 9e-11
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 56 2e-08
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 56 3e-08
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 56 3e-08
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 56 3e-08
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 56 3e-08
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 53 2e-07
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 53 2e-07
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 49 4e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 48 5e-06
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 48 6e-06
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 48 8e-06
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 47 1e-05
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 46 3e-05
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 45 4e-05
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 44 1e-04
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 44 1e-04
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 44 1e-04
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 42 4e-04
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 41 0.001
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 41 0.001
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 41 0.001
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 41 0.001
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 40 0.001
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 40 0.001
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 40 0.002
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 39 0.003
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 39 0.003
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 39 0.003
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 39 0.003
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 39 0.003
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 39 0.003
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 39 0.004
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 38 0.005
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 38 0.005
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 38 0.009
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 38 0.009
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 37 0.015
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 37 0.015
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 37 0.015
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 36 0.020
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 36 0.020
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 36 0.027
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 36 0.027
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 35 0.047
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 35 0.047
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 35 0.047
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 35 0.047
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 35 0.062
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 33 0.14
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 33 0.14
U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical pr... 33 0.25
U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical pr... 33 0.25
U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 31 1.0
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 30 1.3
U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical pr... 30 1.8
U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.1
Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical pr... 28 7.1
AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans Na/Ca,K-excha... 28 7.1
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 27 9.4
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 27 9.4
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 27 9.4
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 195 bits (475), Expect = 3e-50
Identities = 92/132 (69%), Positives = 109/132 (82%), Gaps = 2/132 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEV+HFCPNVPIILVGNK+DL
Sbjct: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDL 121
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLC--QKQGSVREVFETATRAALQ 610
R+DP T+ EL KMKQEPVKP++ G + + + C + + +REVFE AT+AALQ
Sbjct: 122 RSDPQTVRELAKMKQEPVKPEQ-GRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQ 180
Query: 611 VKKKKKTRCSLL 646
KKKKK++C +L
Sbjct: 181 QKKKKKSKCMIL 192
Score = 124 bits (298), Expect = 8e-29
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +3
Query: 75 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFP+VYVPTVFEN VADIEVDGKQVELALWDT
Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDT 60
Query: 255 LAKK 266
++
Sbjct: 61 AGQE 64
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 195 bits (475), Expect = 3e-50
Identities = 92/132 (69%), Positives = 109/132 (82%), Gaps = 2/132 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYPDTDVILMCFS+DSPDSLENIPEKWTPEV+HFCPNVPIILVGNK+DL
Sbjct: 62 GQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVRHFCPNVPIILVGNKRDL 121
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLC--QKQGSVREVFETATRAALQ 610
R+DP T+ EL KMKQEPVKP++ G + + + C + + +REVFE AT+AALQ
Sbjct: 122 RSDPQTVRELAKMKQEPVKPEQ-GRAIAEQIGAFAYLECSAKTKDGIREVFEKATQAALQ 180
Query: 611 VKKKKKTRCSLL 646
KKKKK++C +L
Sbjct: 181 QKKKKKSKCMIL 192
Score = 124 bits (298), Expect = 8e-29
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +3
Query: 75 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
MAAIRKKLVIVGDGACGKTCLLIVFSKDQFP+VYVPTVFEN VADIEVDGKQVELALWDT
Sbjct: 1 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVADIEVDGKQVELALWDT 60
Query: 255 LAKK 266
++
Sbjct: 61 AGQE 64
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 128 bits (308), Expect = 5e-30
Identities = 64/133 (48%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAAL- 607
R D T+ LR+ + +PV Q GY + + C Q +++VF+ A RA L
Sbjct: 120 REDRDTVERLRERRLQPVS-QTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLT 178
Query: 608 QVKKKKKTRCSLL 646
++ KK++C++L
Sbjct: 179 PPQRAKKSKCTVL 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+N A++ VDG+ + L LWDT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 128 bits (308), Expect = 5e-30
Identities = 64/133 (48%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAAL- 607
R D T+ LR+ + +PV Q GY + + C Q +++VF+ A RA L
Sbjct: 120 REDRDTVERLRERRLQPVS-QTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVLT 178
Query: 608 QVKKKKKTRCSLL 646
++ KK++C++L
Sbjct: 179 PPQRAKKSKCTVL 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+N A++ VDG+ + L LWDT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 126 bits (305), Expect = 1e-29
Identities = 63/133 (47%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAAL- 607
R D T+ LR+ + +PV Q GY + + C Q +++VF+ A RA +
Sbjct: 120 REDRDTVERLRERRLQPVS-QTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVT 178
Query: 608 QVKKKKKTRCSLL 646
++ KK++C++L
Sbjct: 179 PPQRAKKSKCTVL 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+N A++ VDG+ + L LWDT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 126 bits (305), Expect = 1e-29
Identities = 63/133 (47%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAAL- 607
R D T+ LR+ + +PV Q GY + + C Q +++VF+ A RA +
Sbjct: 120 REDRDTVERLRERRLQPVS-QTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVT 178
Query: 608 QVKKKKKTRCSLL 646
++ KK++C++L
Sbjct: 179 PPQRAKKSKCTVL 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+N A++ VDG+ + L LWDT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 126 bits (305), Expect = 1e-29
Identities = 63/133 (47%), Positives = 86/133 (64%), Gaps = 3/133 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAAL- 607
R D T+ LR+ + +PV Q GY + + C Q +++VF+ A RA +
Sbjct: 120 REDRDTVERLRERRLQPVS-QTQGYVMAKEIKAVKYLECSALTQRGLKQVFDEAIRAVVT 178
Query: 608 QVKKKKKTRCSLL 646
++ KK++C++L
Sbjct: 179 PPQRAKKSKCTVL 191
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+N A++ VDG+ + L LWDT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 121 bits (292), Expect = 4e-28
Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CFSV +P S EN+ EKW PE+ H C P +LVG + DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDL 119
Query: 437 RNDPATINELRKMKQEPVKP---QKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAAL 607
R+DP + +L K KQ+PV +K K + L QK ++ VF+ A AAL
Sbjct: 120 RDDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQK--GLKNVFDEAILAAL 177
Query: 608 Q-VKKKKKTRCSLL 646
+++KK +C++L
Sbjct: 178 DPPQQEKKKKCNIL 191
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+N + + G+ L L+DT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 62
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 121 bits (292), Expect = 4e-28
Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CFSV +P S EN+ EKW PE+ H C P +LVG + DL
Sbjct: 57 GQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDL 116
Query: 437 RNDPATINELRKMKQEPVKP---QKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAAL 607
R+DP + +L K KQ+PV +K K + L QK ++ VF+ A AAL
Sbjct: 117 RDDPGMLEKLAKNKQKPVSTDVGEKLAKELKAVKYVECSALTQK--GLKNVFDEAILAAL 174
Query: 608 Q-VKKKKKTRCSLL 646
+++KK +C++L
Sbjct: 175 DPPQQEKKKKCNIL 188
Score = 64.9 bits (151), Expect = 5e-11
Identities = 28/58 (48%), Positives = 40/58 (68%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+N + + G+ L L+DT ++
Sbjct: 2 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQE 59
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 121 bits (291), Expect = 5e-28
Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 4/134 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV L+CFSV +P S EN+ EKW PE+ H C P +LVG + DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCSKTPFLLVGTQVDL 119
Query: 437 RNDPATINELRKMKQEPVKP---QKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAAL 607
R+DP + +L K KQ+PV +K K + L +K+ ++ VF+ A AAL
Sbjct: 120 RDDPGMLEKLAKNKQKPVSTYVGEKLAKELKAVKYVECSALTEKE--LKNVFDEAILAAL 177
Query: 608 Q-VKKKKKTRCSLL 646
+++KK +C++L
Sbjct: 178 DPPQQEKKKKCNIL 191
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ ++FP YVPTVF+N + G+ L L+DT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMIGGEPYTLGLFDTAGQE 62
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 113 bits (271), Expect = 1e-25
Identities = 58/132 (43%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV ++CFSV SP S +N+ KW PE++ CP+ P+ILVG K DL
Sbjct: 64 GQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDL 123
Query: 437 RNDPATINELRKMKQEPV-KPQKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAALQV 613
R++ + L+ + P+ K Q K V Q + +VFE A R+ L
Sbjct: 124 RDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHP 183
Query: 614 K-KKKKTRCSLL 646
K +KKK C+++
Sbjct: 184 KPQKKKKSCNIM 195
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDG GKTC+LI ++ D FP YVPTVF+N A + +DG V L LWDT ++
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQE 66
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 113 bits (271), Expect = 1e-25
Identities = 58/132 (43%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQEDYDRLRPLSYP TDV ++CFSV SP S +N+ KW PE++ CP+ P+ILVG K DL
Sbjct: 64 GQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVILVGTKLDL 123
Query: 437 RNDPATINELRKMKQEPV-KPQKAGYG*KD*RVCISGMLCQKQGSVREVFETATRAALQV 613
R++ + L+ + P+ K Q K V Q + +VFE A R+ L
Sbjct: 124 RDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDAVRSILHP 183
Query: 614 K-KKKKTRCSLL 646
K +KKK C+++
Sbjct: 184 KPQKKKKSCNIM 195
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/58 (53%), Positives = 40/58 (68%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDG GKTC+LI ++ D FP YVPTVF+N A + +DG V L LWDT ++
Sbjct: 9 KCVVVGDGTVGKTCMLISYTTDSFPVQYVPTVFDNYSAQMSLDGNVVNLGLWDTAGQE 66
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 112 bits (270), Expect = 2e-25
Identities = 58/137 (42%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQ+DYD+ R LS+P TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAALQ 610
R D TI LR+ + +PV GY + + C Q +++VF+ A R L
Sbjct: 120 REDRDTIERLRERRLQPVS-HTQGYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLT 178
Query: 611 VKKKKKTRCSLL*CAVV 661
+ +TR C V+
Sbjct: 179 PPQTPQTRAKKSNCTVL 195
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K V+VGDGA GKTCLL+ ++ + FP Y+ TVF+ ++ VDG+ + L+LWDT
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDT 58
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 112 bits (270), Expect = 2e-25
Identities = 58/137 (42%), Positives = 79/137 (57%), Gaps = 2/137 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQ+DYD+ R LS+P TDV L+CF++++P S EN+ KW PEV H CPN PIILVG K DL
Sbjct: 60 GQDDYDQFRHLSFPQTDVFLVCFALNNPASFENVRAKWYPEVSHHCPNTPIILVGTKADL 119
Query: 437 RNDPATINELRKMKQEPVKPQKAGYG*KD*RVCISGMLCQ--KQGSVREVFETATRAALQ 610
R D TI LR+ + +PV GY + + C Q +++VF+ A R L
Sbjct: 120 REDRDTIERLRERRLQPVS-HTQGYVMAKEIKAVKYLECSALTQIGLKQVFDEAIRTGLT 178
Query: 611 VKKKKKTRCSLL*CAVV 661
+ +TR C V+
Sbjct: 179 PPQTPQTRAKKSNCTVL 195
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K V+VGDGA GKTCLL+ ++ + FP Y+ TVF+ ++ VDG+ + L+LWDT
Sbjct: 5 KCVVVGDGAVGKTCLLLSYTTNAFPGEYILTVFDTYSTNVMVDGRPINLSLWDT 58
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 74.1 bits (174), Expect = 8e-14
Identities = 31/58 (53%), Positives = 43/58 (74%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+N A++ VDG+ + L LWDT ++
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQE 62
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 64.1 bits (149), Expect = 9e-11
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 433
GQ +Y+++R LSYP +V L+CFS+ +LE+ W PE++ + NVPI+LVG K D
Sbjct: 61 GQGNYEQIRCLSYPHANVFLVCFSMIDRKTLESCRSTWIPEIRKYAGDNVPIMLVGTKND 120
Query: 434 LRNDPATIN 460
L +D + N
Sbjct: 121 LVDDADSRN 129
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/54 (44%), Positives = 34/54 (62%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
KLV+VGD GKT LL+ ++K QF + Y TVF+N + +D K + L+DT
Sbjct: 6 KLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTVFDNWAVSVHIDNKNYAVNLFDT 59
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 56.0 bits (129), Expect = 2e-08
Identities = 26/61 (42%), Positives = 34/61 (55%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQ +D LRPL Y D DV ++ +SV S E++ W PEV P +ILVG + D
Sbjct: 66 GQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTKRNPGTKLILVGTQADQ 125
Query: 437 R 439
R
Sbjct: 126 R 126
Score = 48.0 bits (109), Expect = 6e-06
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K + VG+ A GKT +++ ++ + +P YVPT F+N + VD K + L L DT
Sbjct: 11 KCIFVGNAAVGKTSMIVSYTTNVYPHNYVPTAFDNFSVVVLVDKKPIRLQLHDT 64
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 56.0 bits (129), Expect = 2e-08
Identities = 23/59 (38%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GK+CLL+ F+ D + E Y+ T+ + + IE+DGK ++L +WDT ++
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 71
Score = 35.5 bits (78), Expect = 0.035
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF-CPNVPIILVGNKKD 433
GQE + + Y I++ + + ++ N+ ++W E+ + C NV +LVGNK D
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNV-KQWLQEIDRYACENVNKLLVGNKCD 127
Query: 434 L 436
L
Sbjct: 128 L 128
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GKTC+L FS D F ++ T+ + + IE+DGK+++L +WDT ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNK 427
GQE + + Y I++ + + + S ENI + W ++ H +V +++GNK
Sbjct: 66 GQERFRTITTAYYRGAMGIILVYDITNERSFENI-KNWIRNIEEHAASDVERMIIGNK 122
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/55 (41%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
KL+++GD GK+CLL+ F+ D + E Y+ T+ + + IE+DGK ++L +WDT
Sbjct: 13 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GKTC+L FS D F ++ T+ + + IE+DGK+++L +WDT ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE + + Y I++ + + + S ENI + W ++ H +V +++GNK D
Sbjct: 66 GQERFRTITTAYYRGAMGIILVYDITNERSFENI-KNWIRNIEEHAASDVERMIIGNKCD 124
Query: 434 L 436
+
Sbjct: 125 I 125
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 55.6 bits (128), Expect = 3e-08
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GKTC+L FS D F ++ T+ + + IE+DGK+++L +WDT ++
Sbjct: 10 KLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQE 68
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE + + Y I++ + + + S ENI + W ++ H +V +++GNK D
Sbjct: 66 GQERFRTITTAYYRGAMGIILVYDITNERSFENI-KNWIRNIEEHAASDVERMIIGNKCD 124
Query: 434 L 436
+
Sbjct: 125 I 125
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GKTC+L FS D F ++ T+ + + IE+ GK+++L +WDT ++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
Score = 28.3 bits (60), Expect = 5.4
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKD 433
GQE + + Y I++ + + + S +NI KW + +H +V +++GNK D
Sbjct: 67 GQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIA-KWLRNIDEHASEDVVKMILGNKCD 125
Query: 434 L 436
+
Sbjct: 126 M 126
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+++GD GKTC+L FS D F ++ T+ + + IE+ GK+++L +WDT ++
Sbjct: 11 KLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDTAGQE 69
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 48.8 bits (111), Expect = 4e-06
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K +I+GD GK+CLL+ F+ +F V+ T+ E + +DGKQ++L +WDT ++
Sbjct: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWDTAGQE 66
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
KLV++GDG GK+ L I F + QF + Y PT+ + + E+DG V + + DT ++
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQE 76
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/58 (37%), Positives = 35/58 (60%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
KLV++GDG GK+ L I F + QF + Y PT+ + + E+DG V + + DT ++
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYIQHCEIDGNWVIMDVLDTAGQE 76
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K +I+GD GK+CLL+ F+ +F V+ T+ E + +DGKQ++L +WDT ++
Sbjct: 8 KHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQMWDTAGQE 66
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 47.6 bits (108), Expect = 8e-06
Identities = 20/59 (33%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+GD GK+ LL+ F+ + F E Y+ T+ + + ++++G++V+L +WDT ++
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAGQE 70
Score = 37.5 bits (83), Expect = 0.009
Identities = 17/57 (29%), Positives = 33/57 (57%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNK 427
GQE + + Y T +++ + V + +S N+ ++W E+++ C +V +LVGNK
Sbjct: 68 GQERFRTITSTYYRGTHGVVVVYDVTNGESFGNV-KRWLQEIENNCDSVQKVLVGNK 123
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 47.2 bits (107), Expect = 1e-05
Identities = 20/55 (36%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
KL+I+GD GK+ LL+ F+ + F E Y+ T+ + + ++++G++V+L +WDT
Sbjct: 12 KLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDT 66
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +3
Query: 60 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTVFEN*VADIEVDGKQVE 236
+SS P+ + K++I+G+ GK+ L++ F D F PE + V + +DG +V+
Sbjct: 4 DSSSPLTTL--KILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVK 61
Query: 237 LALWDTLAKK 266
LA+WDT ++
Sbjct: 62 LAIWDTAGQE 71
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 45.2 bits (102), Expect = 4e-05
Identities = 21/54 (38%), Positives = 33/54 (61%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+V++G G GK+ L + F + F E Y PT+ ++ +EVDG+Q L + DT
Sbjct: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDGQQCMLEILDT 58
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/59 (35%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K VI+GDG GK+ LL+ F+ + F ++ T+ E D+++D +V L +WDT ++
Sbjct: 8 KYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTCGQE 66
Score = 31.1 bits (67), Expect = 0.76
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE++ + Y + L+ + + S ++ E+W +++ H P + I+L+GNK D
Sbjct: 64 GQENFRSIIRAYYRNALGALLVYDITCRKSFVHL-EQWLSDLRQHGHPEMVIMLIGNKSD 122
Query: 434 LR 439
L+
Sbjct: 123 LK 124
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 44.0 bits (99), Expect = 1e-04
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKK 430
GQEDY +R Y + + FS+ +S E E + VK+ +VPI+LVGNK
Sbjct: 74 GQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQILRVKNSDSSVPIVLVGNKG 133
Query: 431 DLRNDPATINELRKMKQE 484
D+R+ EL + + E
Sbjct: 134 DMRDQRVVSAELCRQRAE 151
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/65 (29%), Positives = 36/65 (55%)
Frame = +3
Query: 72 PMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWD 251
P + K+++VG G GK+ L + F D+F E Y PT ++ + +DG++ + + D
Sbjct: 12 PQQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPTKADSYRKKVVLDGEECSIDILD 71
Query: 252 TLAKK 266
T ++
Sbjct: 72 TAGQE 76
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
KLV+VGDG GK+ L I ++ F E Y PT+ ++ + +DG+ L + DT ++
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE 62
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKK 430
GQE+Y +R + L+ F+V+ S EN+ + +++ +VP++LVGNK
Sbjct: 60 GQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENV-ANYREQIRRVKDSDDVPMVLVGNKC 118
Query: 431 DLRN---DPATINELRK 472
DL + D T++E K
Sbjct: 119 DLSSRSVDFRTVSETAK 135
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 43.6 bits (98), Expect = 1e-04
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
KLV+VGDG GK+ L I ++ F E Y PT+ ++ + +DG+ L + DT ++
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTIEDSYRKQVVIDGETCLLDILDTAGQE 65
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHF--CPNVPIILVGNKK 430
GQE+Y +R + L+ F+V+ S EN+ + +++ +VP++LVGNK
Sbjct: 63 GQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENV-ANYREQIRRVKDSDDVPMVLVGNKC 121
Query: 431 DLRN---DPATINELRK 472
DL + D T++E K
Sbjct: 122 DLSSRSVDFRTVSETAK 138
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
GQE + LR Y ++ F V + + +N+P W ++ C N+PI+L GNK D+
Sbjct: 67 GQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPN-WHRDLARVCENIPIVLCGNKVDV 125
Query: 437 RN 442
++
Sbjct: 126 KD 127
Score = 32.3 bits (70), Expect = 0.33
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KLV+VGDG GKT + +F + YV T+ E + Q+ +WDT ++
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGQIRFNVWDTAGQE 69
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +3
Query: 69 GPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VAD-IEV-DGKQVELA 242
GP+ + +L+++GD GK+ LL F++ + E+ PTV + A IE+ G +V+L
Sbjct: 11 GPLFHYQYRLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMIELRPGYRVKLQ 70
Query: 243 LWDTLAKK 266
LWDT ++
Sbjct: 71 LWDTAGQE 78
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K+V+VGD CGK+C+L+ F+++ F ++ T+ + + I++ ++ L LWDT
Sbjct: 8 KIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIRLELWDT 62
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
G E Y + Y ++ + + + S EN+ + W E+K H PN ++LVGNK D
Sbjct: 64 GMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLMLVGNKAD 123
Query: 434 L 436
+
Sbjct: 124 M 124
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+V++G G GK+ L + F F E Y PT+ + +IEVDG+ L + DT
Sbjct: 5 KVVVLGSGGVGKSALTVQFVSSTFIEKYDPTIEDFYRKEIEVDGQPSVLEILDT 58
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
G E + +R L + ++ +S+ S + +I V+ NVPI+LVGNK D
Sbjct: 60 GTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIVRVKGSENVPILLVGNKCD 119
Query: 434 L 436
L
Sbjct: 120 L 120
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K +I+GD GK+CLL F++ +F T+ E IEV G++++L +WDT ++
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71
Score = 28.7 bits (61), Expect = 4.1
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 433
GQE + + Y LM + + + ++ W + K PN I L+GNK D
Sbjct: 69 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL-SSWLADAKSLTNPNTAIFLIGNKAD 127
Query: 434 LRN 442
L +
Sbjct: 128 LED 130
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K+V+VGD GKTC++ F F + T+ + + + VDGK+V+L +WDT
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 260 QEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 439
QE + LR Y ++ F V + + +N+P W ++ C N+PI+L GNK D++
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPN-WHHDLARVCENIPIVLCGNKVDVK 60
Query: 440 N 442
+
Sbjct: 61 D 61
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K+V+VGD GKTC++ F F + T+ + + + VDGK+V+L +WDT
Sbjct: 12 KIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVDGKRVKLQIWDT 66
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 433
GQE + + Y + I++C+ + S ++ ++W +V F PNV +L+G K D
Sbjct: 68 GQERFRTITQSYYRSANGIVLCYDITCKQSFGSL-QRWIDDVSKFAAPNVVKLLIGTKCD 126
Query: 434 LRNDPATINELRKMKQ 481
L + A E +M Q
Sbjct: 127 LEDQRAIEAEEAEMLQ 142
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K VI+GD GK+ LL+ F F ++ T+ E ++E+D K+V+L +WDT ++
Sbjct: 8 KYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWDTCGQE 66
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDT 254
K +I+GD GK+CLL F++ +F T+ E IEV G++++L +WDT
Sbjct: 13 KYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Frame = +3
Query: 66 SGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VA-DIEVDGKQVELA 242
SG K++I+GD GKT L+ + +F Y T+ + + D+ +D + V L
Sbjct: 2 SGTRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQ 61
Query: 243 LWDTLAKK 266
+WDT ++
Sbjct: 62 IWDTAGQE 69
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 39.5 bits (88), Expect = 0.002
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKKI 269
K+V++G+ GK+ LL F++++F PT+ E I V+GK V++ +WDT +
Sbjct: 10 KIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVKVQIWDTAGME- 68
Query: 270 TIGCGRS 290
CG S
Sbjct: 69 RFRCGAS 75
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE Y + Y L+ + + + EN+ E+W E++ H N+ I+LVGNK D
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHVTYENV-ERWLKELRDHADQNIVIMLVGNKSD 127
Query: 434 LRNDPATINELRKMKQE 484
LR+ A + K+ E
Sbjct: 128 LRHLRAVPTDEAKIYAE 144
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V++GD GK+ LL F++++F T+ E I V+GK V+ +WDT ++
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQE 71
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+G+ + GKT L + D F +V TV + V + K+V+L +WDT ++
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+G+ + GKT L + D F +V TV + V + K+V+L +WDT ++
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+G+ + GKT L + D F +V TV + V + K+V+L +WDT ++
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+G+ + GKT L + D F +V TV + V + K+V+L +WDT ++
Sbjct: 38 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 96
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 39.1 bits (87), Expect = 0.003
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V+VG+ GKTCL+ F++ FP T+ + + ++V +++L +WDT ++
Sbjct: 9 KVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIKLQIWDTAGQE 67
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFC-PNVPIILVGNKKD 433
GQE + + Y I++ + V S + +PE W E++ + V ILVGNK D
Sbjct: 65 GQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPE-WLGEIESYANRRVLKILVGNKVD 123
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
KL+I+G+ + GKT L + D F +V TV + V + K+V+L +WDT ++
Sbjct: 24 KLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQE 82
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEV-KHFCPNVPIILVGNKKD 433
GQE Y L P+ Y ++ + + + +S + + W E+ + PN+ + L GNK D
Sbjct: 77 GQERYHSLAPMYYRGAQAAIVVYDITNQESFQKA-KNWVKELQRQASPNIVMALAGNKAD 135
Query: 434 LRN 442
+ N
Sbjct: 136 VAN 138
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 69 GPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VAD-IEVDGKQVELAL 245
GP + KLV++G+ A GK+ L++ F K QF E T+ + + +D ++ +
Sbjct: 13 GPNRTCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIKFEI 72
Query: 246 WDTLAKK 266
WDT ++
Sbjct: 73 WDTAGQE 79
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K+V++GD GK+ LL F++++F T+ E I V+GK V+ +WDT ++
Sbjct: 13 KVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQE 71
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKD 433
GQE Y + Y L+ + + + EN+ E+W E++ H N+ I+ VGNK D
Sbjct: 69 GQERYRAITSAYYRGAVGALLVYDIAKHVTYENV-ERWLKELRDHADQNIVIMPVGNKCD 127
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FEN*VADIEVDGKQVELALWDTLAK 263
K+V+VG+ GKT LL F + F + T+ F++ + + DG+ + L LWDT +
Sbjct: 8 KVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLN-DGQSIRLQLWDTAGQ 66
Query: 264 K 266
+
Sbjct: 67 E 67
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDL 436
G E + +R Y ++ FS+ + EN+ + +T + VP+ILVGNK DL
Sbjct: 60 GTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGKEVPMILVGNKSDL 119
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDT 254
K+V++G+G GK+ L + + + F Y T+ ++ +VD + L + DT
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATIEDSYRKLSKVDAENARLEILDT 58
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 37.5 bits (83), Expect = 0.009
Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +3
Query: 60 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV---FEN*VADIEVDGKQ 230
E++ + + K+V++G+G GK+ L++ F +++F ++ T+ F+N + V+ Q
Sbjct: 3 ETNVDQKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQN--KTVNVEDCQ 60
Query: 231 VELALWDTLAKK 266
+L +WDT ++
Sbjct: 61 ADLHIWDTAGQE 72
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +3
Query: 60 ESSGPMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVE 236
+++GP A ++V+ GD A GK+ ++ + QF T+ + V + VDG+ V
Sbjct: 453 DANGP-AERTFRIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVDGRNVA 511
Query: 237 LALWDTLAKK 266
L LWDT ++
Sbjct: 512 LQLWDTAGQE 521
Score = 31.1 bits (67), Expect = 0.76
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKD 433
GQE + L + D ++ + V + S + + W +K ++PIILVGNK D
Sbjct: 519 GQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRD-WIETIKESTERSIPIILVGNKVD 577
Query: 434 LR 439
+R
Sbjct: 578 MR 579
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 433
GQE + + Y D D +L+ + + + S EN W ++K + V + LVGNK D
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLVGNKCD 119
Query: 434 L 436
L
Sbjct: 120 L 120
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTV---FEN*VADIEVDGKQVELALWDTLA 260
K++++GD GKTCLLI + F ++ TV + N + I + K+V+L +WDT
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKL--ITMGDKKVKLQIWDTAG 61
Query: 261 KK 266
++
Sbjct: 62 QE 63
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 36.7 bits (81), Expect = 0.015
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPN-VPIILVGNKKD 433
GQE + + Y D D +L+ + + + S EN W ++K + V + LVGNK D
Sbjct: 61 GQERFRSVTTSYYRDADALLLVYDIANRASFENC-RNWLSQIKEYGKEAVQVTLVGNKCD 119
Query: 434 L 436
L
Sbjct: 120 L 120
Score = 35.5 bits (78), Expect = 0.035
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQF-PEVYVPTV---FEN*VADIEVDGKQVELALWDTLA 260
K++++GD GKTCLLI + F ++ TV + N + I + K+V+L +WDT
Sbjct: 4 KVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKL--ITMGDKKVKLQIWDTAG 61
Query: 261 KK 266
++
Sbjct: 62 QE 63
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEVDGKQVELALWDTLAKK 266
K++IVG+ A GKTCL F +FPE T+ + ++ + + + LWDT ++
Sbjct: 102 KVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLRVQLWDTAGQE 160
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VA-DIEVDGKQVELALWDTLAKK 266
KLV +G+ + GKT L+ F D F Y T+ + ++ + ++ + V L LWDT ++
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 70
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Frame = +3
Query: 81 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VA-DIEVDGKQVELALWDT 254
A++K KLV +G+ + GKT ++ F D F Y T+ + ++ + ++ + + L LWDT
Sbjct: 8 ALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDT 67
Query: 255 LAKK 266
++
Sbjct: 68 AGQE 71
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 35.9 bits (79), Expect = 0.027
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FEN*VADIEV-DGKQVELALWDTLAKK 266
K+V VGD A GKTC L F ++F ++ T+ + V +++ + + + LWDT ++
Sbjct: 204 KVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVKTMKIPPNRAIAMQLWDTAGQE 263
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
++V+VG G GK+ L I F + F + Y PT+ ++ VD +L + DT ++
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKK 430
GQE++ +R L+ F+V +S E + + + +K + PIILVGNK
Sbjct: 74 GQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVGNKA 132
Query: 431 DLRND 445
DL N+
Sbjct: 133 DLENE 137
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
++V+VG G GK+ L I F + F + Y PT+ ++ VD +L + DT ++
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKK 430
GQE++ +R L+ F+V +S E + + + +K + PIILVGNK
Sbjct: 74 GQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVGNKA 132
Query: 431 DLRND 445
DL N+
Sbjct: 133 DLENE 137
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
++V+VG G GK+ L I F + F + Y PT+ ++ VD +L + DT ++
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKK 430
GQE++ +R L+ F+V +S E + + + +K + PIILVGNK
Sbjct: 74 GQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVGNKA 132
Query: 431 DLRND 445
DL N+
Sbjct: 133 DLENE 137
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 35.1 bits (77), Expect = 0.047
Identities = 18/58 (31%), Positives = 31/58 (53%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
++V+VG G GK+ L I F + F + Y PT+ ++ VD +L + DT ++
Sbjct: 19 RIVVVGGGGVGKSALTIQFIQRYFVQDYDPTIEDSYTKQCFVDEDLCKLEILDTAGQE 76
Score = 31.9 bits (69), Expect = 0.44
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPE--KWTPEVKHFCPNVPIILVGNKK 430
GQE++ +R L+ F+V +S E + + + +K + PIILVGNK
Sbjct: 74 GQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHELICRIKDR-DDFPIILVGNKA 132
Query: 431 DLRND 445
DL N+
Sbjct: 133 DLENE 137
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 34.7 bits (76), Expect = 0.062
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 188
K+V+VGDGA GKT + F+K+ F + Y T+
Sbjct: 37 KIVVVGDGASGKTSICQRFAKESFDKSYHQTL 68
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 266 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTP--EVKHFCPNVPIILVGNKKDLR 439
++ +R LS L+ FSVD S + + + W + +PI++VGNK D+
Sbjct: 75 NFPDMRRLSIASASAFLLVFSVDDVTSFKEMSDIWQEICSRRSDLNELPIVVVGNKCDVE 134
Query: 440 N 442
N
Sbjct: 135 N 135
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VA-DIEVDGKQVELALWDT 254
+LV +G+ + GKT L+ F D F Y T+ + ++ + ++ + V L +WDT
Sbjct: 12 ELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQMWDT 66
>U70855-4|AAB09163.1| 625|Caenorhabditis elegans Hypothetical
protein K08F11.5 protein.
Length = 625
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 305 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPN---VPIILVGNKKD 433
+VI + +SV +++ I KW P ++ P+ILVGNK D
Sbjct: 81 NVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 126
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLAKK 266
++V++GD CGKT L++ +D++ + VP + + +V + V ++ D K+
Sbjct: 11 RIVLIGDEGCGKTSLVMSLLEDEWVDA-VPRRLDRVLIPADVTPENVTTSIVDLSIKE 67
>U67951-4|AAB07572.1| 398|Caenorhabditis elegans Hypothetical
protein C47C12.4 protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.25
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 305 DVILMCFSVDSPDSLENIPEKWTPEVKHFCPN---VPIILVGNKKD 433
+VI + +SV +++ I KW P ++ P+ILVGNK D
Sbjct: 21 NVICVVYSVTDESTVDGIQTKWLPLIRQSFGEYHETPVILVGNKSD 66
>U41276-1|AAA82469.1| 238|Caenorhabditis elegans Hypothetical
protein C52B11.5 protein.
Length = 238
Score = 31.1 bits (67), Expect = 0.76
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = +2
Query: 299 DTDVILMCFSVDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLR 439
D D +L+ ++ D +S + + E + PN I +VG K D++
Sbjct: 97 DVDAVLLFYAADDLESFKQLKENLVHVQRKIPPNANITVVGTKADVK 143
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/62 (24%), Positives = 33/62 (53%)
Frame = +3
Query: 81 AIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWDTLA 260
++ +K+ ++G GK+ L++ F+++ FPE Y T+ + I + L + DT
Sbjct: 11 SLNRKVAVMGYPHVGKSALVLRFTQNIFPERYESTIEDQHSKHIAAFHRDYHLRVTDTAG 70
Query: 261 KK 266
++
Sbjct: 71 QQ 72
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +2
Query: 257 GQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWTPEVKHFCP-NVPIILVGNKKD 433
GQ++Y D + ++ +++D S E + V+ + ++PI++VGNK D
Sbjct: 70 GQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIVRTYGDTSIPIVIVGNKTD 129
Query: 434 L 436
L
Sbjct: 130 L 130
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 30.3 bits (65), Expect = 1.3
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 81 AIRK-KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VA-DIEVDGKQVELALW 248
A++K KLV +G+ + GKT ++ F D F Y T+ + ++ + ++ + + L +W
Sbjct: 8 ALKKFKLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQIW 65
>U39996-3|AAA81089.1| 621|Caenorhabditis elegans Hypothetical
protein C56E6.3a protein.
Length = 621
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -1
Query: 370 PLLWDVLERIRRVHREAHEDHIRIWIRERPQPIVIFLARVSHRASSTCFPS 218
PLL+ + + H+ +H + + +W R + L +++ SS FPS
Sbjct: 347 PLLYFEAKPVASNHKTSHNEQLYLWCRAALDAVKNRLEKMTQNGSSPLFPS 397
>U39996-2|AAU20848.1| 607|Caenorhabditis elegans Hypothetical
protein C56E6.3b protein.
Length = 607
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -1
Query: 370 PLLWDVLERIRRVHREAHEDHIRIWIRERPQPIVIFLARVSHRASSTCFPS 218
PLL+ + + H+ +H + + +W R + L +++ SS FPS
Sbjct: 347 PLLYFEAKPVASNHKTSHNEQLYLWCRAALDAVKNRLEKMTQNGSSPLFPS 397
>AF106576-6|AAC78178.1| 381|Caenorhabditis elegans Hypothetical
protein W07E6.3 protein.
Length = 381
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 210 IEVDGKQVELALWDTLAKKITIGCG 284
+++DGKQ+E+ W TL +G G
Sbjct: 66 VKIDGKQLEVRKWPTLLATAMVGVG 90
>Z81075-4|CAB03047.2| 596|Caenorhabditis elegans Hypothetical
protein F35C12.2a protein.
Length = 596
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 555 WQSIPDMQTR*SFQPYPAFCGFTGSCFILRSSLMV--AGSLRRSFLLPTKIIG 403
W +IPD++ + YPA + S LMV A ++ +F++PT+IIG
Sbjct: 410 WVTIPDVRKSHNRGLYPATFIISILWIAFFSYLMVWWANTIGETFVIPTEIIG 462
>AJ005701-1|CAA06686.1| 596|Caenorhabditis elegans
Na/Ca,K-exchanger protein.
Length = 596
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -2
Query: 555 WQSIPDMQTR*SFQPYPAFCGFTGSCFILRSSLMV--AGSLRRSFLLPTKIIG 403
W +IPD++ + YPA + S LMV A ++ +F++PT+IIG
Sbjct: 410 WVTIPDVRKSHNRGLYPATFIISILWIAFFSYLMVWWANTIGETFVIPTEIIG 462
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWD 251
+L +VG GKT + V + QF E +PTV N ++ V + LWD
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFN---MRKITKGNVTIKLWD 71
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +3
Query: 201 VADIEVDGKQVELALWDTLAKK 266
V + +DG +V+LA+WDT ++
Sbjct: 23 VTSMAIDGNRVKLAIWDTAGQE 44
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 27.5 bits (58), Expect = 9.4
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 93 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFEN*VADIEVDGKQVELALWD 251
+L +VG GKT + V + QF E +PTV N ++ V + LWD
Sbjct: 22 ELTLVGLQNSGKTTFVNVIASGQFTEDMIPTVGFN---MRKITKGNVTIKLWD 71
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,708,669
Number of Sequences: 27780
Number of extensions: 358991
Number of successful extensions: 1271
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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