Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20132
(695 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0) 119 3e-27
SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0) 91 8e-19
SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0) 80 2e-15
SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0) 79 3e-15
SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41) 72 4e-13
SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33) 70 2e-12
SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 1e-09
SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32) 52 3e-07
SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06) 51 1e-06
SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0) 50 2e-06
SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27) 49 4e-06
SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19) 46 2e-05
SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21) 46 3e-05
SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 8e-04
SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 0.001
SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19) 38 0.006
SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.67
SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07) 31 1.2
SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1) 29 3.6
SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019) 29 4.8
SB_8819| Best HMM Match : I-set (HMM E-Value=0) 29 4.8
SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2) 28 6.3
SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_2143| Best HMM Match : ig (HMM E-Value=1.9e-09) 28 8.3
>SB_42595| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 536
Score = 119 bits (286), Expect = 3e-27
Identities = 50/77 (64%), Positives = 63/77 (81%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+APWCGHCK+LAPEYAKAA +L E+S IKLAKVDAT E L E + V+GYPT+KFF++G
Sbjct: 49 YAPWCGHCKALAPEYAKAAGQLKSEKSEIKLAKVDATAETKLGEKFQVQGYPTIKFFKDG 108
Query: 434 SPIDYSGGRQADDIISW 484
P +Y+GGR A +I+SW
Sbjct: 109 KPSEYAGGRTAPEIVSW 125
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF-RN 430
+APWCGHCK LAP + + K ++ + I +AK+D+T + E V +PT+K+F +
Sbjct: 410 YAPWCGHCKQLAPIWDQLGEKY-KDHADIVVAKMDSTANE--VEGVKVHSFPTIKYFPKE 466
Query: 431 GSPIDYSGGRQADDIISW 484
G +DY+GGR DD + +
Sbjct: 467 GEAVDYNGGRTLDDFVKF 484
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/56 (42%), Positives = 35/56 (62%)
Frame = +1
Query: 502 PPSVEVTSAEQAKELIDANTVIVFGFFSDQSSTRAKTFLSTAQVVDDQVFAIVSDE 669
PP+ ++ +A+ K+ I +V GFF+D+ S AK FLS A +DD F IVSD+
Sbjct: 132 PPAKDLATADAMKDFITKEVAVV-GFFTDKESDAAKAFLSAADGIDDVEFGIVSDK 186
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/48 (39%), Positives = 34/48 (70%)
Frame = +3
Query: 111 MRVLIFTAIALLGLALGDEVPTEENVLVLSKANFETVISTTEYILVEF 254
M++L +AL+ LA +E+ EE+VLVL++ NF+ ++ +++LVEF
Sbjct: 1 MKLLPVLLLALVSLAYSEEIKEEEDVLVLTEKNFDEAVAANKHVLVEF 48
>SB_48081| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 645
Score = 103 bits (246), Expect = 2e-22
Identities = 42/77 (54%), Positives = 55/77 (71%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+APWCGHCKSLAPEYAKAA K+ + P+ AK+DAT D+A+ + V GYPTLK FR G
Sbjct: 86 YAPWCGHCKSLAPEYAKAAKKMKLNDPPVPFAKMDATVASDIAQRFDVSGYPTLKIFRKG 145
Query: 434 SPIDYSGGRQADDIISW 484
+P +Y G R+ I+ +
Sbjct: 146 TPYEYEGPREESGIVEY 162
Score = 97.1 bits (231), Expect = 1e-20
Identities = 44/76 (57%), Positives = 52/76 (68%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 436
APWCGHCK LAPEY KAA +L + + PI LA VDAT E +LA+ Y V+GYPTLK FR G
Sbjct: 202 APWCGHCKQLAPEYEKAAQELQKHDPPIPLAIVDATIESELAQKYEVQGYPTLKVFRKGK 261
Query: 437 PIDYSGGRQADDIISW 484
+Y G R I S+
Sbjct: 262 ATEYKGQRDQYGIASY 277
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+APWCG +L P + K +++ I +AK+DAT D+ +Y V G+PT+ F +
Sbjct: 551 YAPWCGI--ALEPTFKKLGKHFRNDKN-IVIAKIDATAN-DVPSTYAVEGFPTIYFATSK 606
Query: 434 ---SPIDYSGGRQADDIISW 484
+PI + GGR+ D+I +
Sbjct: 607 DKKNPIKFDGGRELKDLIKF 626
Score = 33.5 bits (73), Expect = 0.17
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +3
Query: 162 DEVPTEENVLVLSKANFETVISTTEYILVEF 254
DEV E++V VL+ NF+ VI ILVEF
Sbjct: 55 DEVKEEDDVSVLNSKNFDRVIEENNIILVEF 85
>SB_35157| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 1056
Score = 91.1 bits (216), Expect = 8e-19
Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQE-QDLAESYGVRGYPTLKFFRNG 433
APWCGHCK LAPEY AA L + + P+ LAKVD T+ +D YGV GYPTLK FRNG
Sbjct: 564 APWCGHCKRLAPEYETAAEALKKNDPPVPLAKVDCTEAGKDTCSKYGVSGYPTLKIFRNG 623
Query: 434 S-PIDYSGGRQADDIISW 484
DY G R + II +
Sbjct: 624 EMSKDYDGPRDSSGIIRY 641
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRG 403
+APWCGHCKSL P+Y + KL ++ I +AK+DAT D ++ V+G
Sbjct: 888 YAPWCGHCKSLEPKYNELGEKL-QDVKDIVIAKMDAT-ANDAPPNFSVQG 935
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 389 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISW 484
+G+ +PTLK FR G P DY+G + + S+
Sbjct: 448 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESY 480
>SB_30398| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 295
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/79 (44%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+APWCGHCK LAP Y + + S + +AKVDA ++DL + V+G+PT+K+F G
Sbjct: 47 YAPWCGHCKQLAPTYEQLGEAYTQS-SDVIIAKVDADGDRDLGSRFDVKGFPTIKYFPKG 105
Query: 434 S--PIDYSGGRQADDIISW 484
S P +Y+GGR +D I +
Sbjct: 106 STTPEEYNGGRDINDFIKF 124
>SB_46929| Best HMM Match : Thioredoxin (HMM E-Value=0)
Length = 362
Score = 79.4 bits (187), Expect = 3e-15
Identities = 41/81 (50%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG- 433
APWCGHC+ LAPE+AKAAT+L + +K+ +DAT A Y V+GYPT+K F G
Sbjct: 106 APWCGHCQRLAPEWAKAATEL---KGKVKVGALDATVHTVTASRYQVQGYPTIKVFAAGI 162
Query: 434 ----SPIDYSGGRQADDIISW 484
S DY GGR A DII +
Sbjct: 163 KNSHSVEDYQGGRTASDIIQY 183
Score = 35.9 bits (79), Expect = 0.031
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +2
Query: 371 QDLAESYGVRGYPTLKFF--RNGSPIDYSGGRQADDII 478
Q + Y +RG+PT+K F SP DY+G R A I+
Sbjct: 5 QSVGGPYNIRGFPTIKIFGANKNSPQDYNGQRTAQGIV 42
>SB_45978| Best HMM Match : Thioredoxin (HMM E-Value=4.19997e-41)
Length = 271
Score = 72.1 bits (169), Expect = 4e-13
Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+APWCGHCK+ P+Y KAA ++ + + AK+D T+ D+ + V GYPTL+++ G
Sbjct: 172 YAPWCGHCKNAKPKYEKAAETFKDQPNRV-FAKLDCTKFGDVCDKEEVNGYPTLRYYLYG 230
Query: 434 S-PIDYSGGRQADDIISW 484
++Y G R +D+IS+
Sbjct: 231 KFVVEYDGDRVTEDLISF 248
Score = 67.3 bits (157), Expect = 1e-11
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFR 427
APWCGHC + P Y KAA L +E++ LA VD T+ +D+A+ + GYPT+K ++
Sbjct: 76 APWCGHCNEMKPNYYKAAQVLHDEDANCNLAAVDCTKHKDVAKKVALAGYPTVKLYK 132
>SB_3640| Best HMM Match : Thioredoxin (HMM E-Value=4.3e-33)
Length = 386
Score = 70.1 bits (164), Expect = 2e-12
Identities = 30/53 (56%), Positives = 37/53 (69%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 412
+APWCGHCK++ PEY AA L E+E P LA VDAT+E L + + V GYPT
Sbjct: 107 YAPWCGHCKAMKPEYVDAAQTLKEQEIPGVLAAVDATKEAALGKRFKVEGYPT 159
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/97 (30%), Positives = 39/97 (40%), Gaps = 20/97 (20%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAA--------------------TKLAEEESPIKLAKVDATQEQ 373
+APWCGHCK PE AA L I A VD T+E
Sbjct: 220 YAPWCGHCKKAKPELMSAAKHHKDKNKRALSLRDFDFSNDTLCNRRRLIAYAAVDCTKEM 279
Query: 374 DLAESYGVRGYPTLKFFRNGSPIDYSGGRQADDIISW 484
+ + +GV GY F + Y+ GR+A D I +
Sbjct: 280 AVCQQFGVEGY----FNYGKNDFKYTSGREAKDFIQF 312
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 266 CGHCKSLAPEYAKAATKLAEE 328
CG+CK PE+A AAT+ +E
Sbjct: 11 CGYCKRFKPEFAAAATEHKDE 31
>SB_56064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 60.5 bits (140), Expect = 1e-09
Identities = 29/76 (38%), Positives = 35/76 (46%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 436
APWC C L PEY KAA + P+ VD T L Y +R YPT + N
Sbjct: 311 APWCPPCMRLLPEYRKAARSFVGK--PVGFGTVDCTVHSQLCHQYNIRSYPTTILYNNSQ 368
Query: 437 PIDYSGGRQADDIISW 484
P + G A DII +
Sbjct: 369 PHQFIGHHNALDIIEF 384
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/57 (33%), Positives = 31/57 (54%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFF 424
+APWCG C AP+Y + A L + ++ AKV+ Q+ L + YPT++ +
Sbjct: 459 YAPWCGPCMRFAPKYEQLAKML---KGKVRAAKVNCEQDYGLCSEANIHSYPTVRLY 512
>SB_30498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 54.4 bits (125), Expect = 8e-08
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD--LAESYGVRGYPTLKFFR 427
+APWC HC+ L P+ AA LA + + AKVD T + L +++ + GYP++K F+
Sbjct: 45 YAPWCHHCQELLPQLEGAANALA-AKGLFQFAKVDCTDPRSKVLCDNFKIEGYPSVKLFK 103
Query: 428 NGSPI-DYSGGRQADDIISW 484
G DY G R ++++
Sbjct: 104 FGKYAGDYIGQRTDAALVNY 123
>SB_27151| Best HMM Match : Thioredoxin (HMM E-Value=9.2e-32)
Length = 456
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 436
A WCG CKS+AP + + K + + KVD Q Q AES G+R PT F+ N +
Sbjct: 37 ATWCGPCKSIAPVFTNLSMKFMD----VVFLKVDVDQCQLTAESCGIRAMPTFHFYHNKA 92
Query: 437 PID 445
ID
Sbjct: 93 KID 95
>SB_20276| Best HMM Match : Thioredoxin (HMM E-Value=9.8e-06)
Length = 70
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAK 352
APWCGHCK LAPEY AA L + + P+ LAK
Sbjct: 39 APWCGHCKRLAPEYETAAEALKKNDPPVPLAK 70
>SB_14273| Best HMM Match : DUF1000 (HMM E-Value=0)
Length = 308
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 436
A WCG CKS+AP Y+ L+E+ K+D Q+LA GV PT +FF+N
Sbjct: 36 ASWCGPCKSIAPVYSG----LSEKYKQAVFLKIDVDVCQELAAKQGVTAMPTFQFFKNKV 91
Query: 437 PID 445
+D
Sbjct: 92 KVD 94
>SB_17740| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-27)
Length = 472
Score = 48.8 bits (111), Expect = 4e-06
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATK-LAEEESPIKLAKVDATQE----QDLAESYGVRGYPTLK 418
+APWC HCK +AP+Y A + L + ++LAKVD + + + Y V+ PT+
Sbjct: 159 YAPWCFHCKKMAPDYKDVAKELLILSHNSVRLAKVDCSANNMATKKTCKKYNVKFLPTIY 218
Query: 419 FFRNGSPID 445
F +G ++
Sbjct: 219 LFHDGKFVE 227
Score = 35.5 bits (78), Expect = 0.041
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKV 355
+APWC C+ L+P + AA +L + ++ AKV
Sbjct: 76 YAPWCSDCQRLSPLFDTAALQLRDNNPSLRFAKV 109
>SB_38445| Best HMM Match : ERp29 (HMM E-Value=2.2e-19)
Length = 335
Score = 46.4 bits (105), Expect = 2e-05
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+APW HC+ + + + A + A+ + I + K +A ++ +A Y + YP ++F G
Sbjct: 51 YAPWDDHCQRILQIFDQVADEFADRDD-IVVGKSNAYEDVKIATRYWIDRYPMFRYFIKG 109
Query: 434 SPID--YSGGRQADDII 478
S + Y GG + DD I
Sbjct: 110 STTEETYDGGFKPDDFI 126
>SB_55398| Best HMM Match : Thioredoxin (HMM E-Value=3.6e-21)
Length = 186
Score = 46.0 bits (104), Expect = 3e-05
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +2
Query: 284 LAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSGGRQ 463
+ P + + ++E+ + +AKVD T + +L +R YPT+K + +G Y+G R
Sbjct: 1 MMPAWEALGEQYSKEKRDLTIAKVDCTSDVNLCVKQNIRAYPTMKLYYDGDIKRYTGRRN 60
Query: 464 ADDI 475
A+D+
Sbjct: 61 AEDM 64
Score = 45.6 bits (103), Expect = 4e-05
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 233 GVHFS*IHAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPT 412
G+HF +APWC HC LAP + + A ++ + I ++K++ GYPT
Sbjct: 107 GLHFVKFYAPWCIHCIKLAPIWERLAEDF-KDNADITISKIN--------------GYPT 151
Query: 413 LKFFRNG-SPIDYSGGRQADDI 475
L F++G +YSG R D +
Sbjct: 152 LMLFKDGVQKKEYSGNRDLDSL 173
>SB_2654| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 436
A WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G
Sbjct: 46 ACWCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGK 102
Query: 437 PIDY 448
+++
Sbjct: 103 VMEH 106
>SB_2655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 80
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 263 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPI 442
WC CK L P + +AE++ + LAKVD +LA ++GV PT+ + G I
Sbjct: 2 WCNPCKVLTP---RLDAIIAEQDGKVDLAKVDIDVMGELAFNFGVNAVPTVIGMKGGKVI 58
Query: 443 D 445
+
Sbjct: 59 N 59
>SB_30496| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKL-AKVDATQEQDLAESYGVRGYPTLKFFRN 430
+APWC C +L P+Y KAA LA+E + A ++ Q GV + TL +
Sbjct: 47 YAPWCSDCDNLRPKYEKAARDLAKEHKFVMAKALMNTNSTQTTCLPMGVHYWRTLLAYTI 106
Query: 431 G 433
G
Sbjct: 107 G 107
>SB_49513| Best HMM Match : Thioredoxin (HMM E-Value=1.8e-19)
Length = 975
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNG 433
+ PWCG C + AP A + ++ S + + ++DA Q DL + V YP++ F G
Sbjct: 543 YTPWCGMCINFAP-VLLAVARFFQDISQVSVTRIDADQ-NDLPWNLTVSSYPSIILFPAG 600
>SB_218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 31.5 bits (68), Expect = 0.67
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 254 HAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQ 367
+A WCG C+ + P++ K A EE + AK+D +
Sbjct: 38 YAEWCGPCRQIKPKFKKMA---LEEFKDVFFAKIDVDE 72
>SB_44457| Best HMM Match : Thioredoxin (HMM E-Value=2.2e-07)
Length = 438
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +2
Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVD 358
A WCG C+ + P++ ++A+E +K AKVD
Sbjct: 20 ATWCGPCRMIGPKF----EEMAKEFKGVKCAKVD 49
>SB_59094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 389 YGVRGYPTLKFFRNGSPI-DYSGGRQADDIISW 484
+G+ +PTLK FR G P DY+G + + S+
Sbjct: 251 FGIHQWPTLKLFRYGQPWGDYTGPQDTASLESY 283
>SB_45044| Best HMM Match : Thioredoxin (HMM E-Value=1.1)
Length = 213
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 263 WCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQD 376
WCG CK+L P++A+ + ++A+ + + +E D
Sbjct: 8 WCGACKALRPKFAE-SKEVAQLSKKFVMVHLQENEEPD 44
>SB_25332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 41
Score = 29.1 bits (62), Expect = 3.6
Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 395 VRGYPTLKFFRNG-SPIDYSGGRQADDI 475
+ GYPTL F++G +YSG R D +
Sbjct: 1 INGYPTLMLFKDGVQKKEYSGNRDLDSL 28
>SB_43665| Best HMM Match : Thioredoxin (HMM E-Value=0.019)
Length = 415
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/53 (24%), Positives = 25/53 (47%)
Frame = +2
Query: 233 GVHFS*IHAPWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESY 391
G++FS A WC C++ PE + + + ++ V + + QD + Y
Sbjct: 177 GIYFS---AHWCPPCRAFTPELVSTYDAVRKANNAFEVIFVSSDRSQDSFKDY 226
>SB_8819| Best HMM Match : I-set (HMM E-Value=0)
Length = 1789
Score = 28.7 bits (61), Expect = 4.8
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +2
Query: 341 KLAKVDATQEQDLAESYGVRGYP--TLKFFRNGSPI 442
KL V T+E D + V G P T+K+F++G P+
Sbjct: 1042 KLQPVQVTEEDDCKLTCKVSGLPEPTIKWFKDGEPV 1077
>SB_31331| Best HMM Match : Thioredoxin (HMM E-Value=1.2)
Length = 214
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 338 IKLAKVDATQEQDLAESYGVRGYPTLKFFRNGSPIDYSG 454
+ +A V+ +E +LA+ GV+ + F G ++Y G
Sbjct: 104 VTVAAVNVAEEYELAQKLGVKFSGAISVFHRGKRVEYYG 142
>SB_38293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1732
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 73 KTELCKMPKSATSFPLPNLTWPRA 2
KT+ ++ SAT P PN+TW R+
Sbjct: 159 KTDKAELSCSATGNPTPNVTWTRS 182
>SB_2143| Best HMM Match : ig (HMM E-Value=1.9e-09)
Length = 306
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 73 KTELCKMPKSATSFPLPNLTWPRA 2
KT ++ SAT P PN+TW R+
Sbjct: 133 KTNTAELTCSATGNPTPNVTWTRS 156
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,877,897
Number of Sequences: 59808
Number of extensions: 364796
Number of successful extensions: 1057
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1817559367
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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