Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20132
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1 prot...    46   1e-06
U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.         25   2.3  
AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.     25   2.3  
AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.     25   2.3  
AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.     25   2.3  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    23   9.2  

>AF236124-1|AAF68382.1|  107|Anopheles gambiae thioredoxin 1
           protein.
          Length = 107

 Score = 46.0 bits (104), Expect = 1e-06
 Identities = 22/73 (30%), Positives = 36/73 (49%)
 Frame = +2

Query: 257 APWCGHCKSLAPEYAKAATKLAEEESPIKLAKVDATQEQDLAESYGVRGYPTLKFFRNGS 436
           A WCG CK +AP+  +   K A++   I + KVD  + ++LA  Y +   PT  F +   
Sbjct: 29  ATWCGPCKVIAPKLEEFQNKYADK---IVVVKVDVDECEELAAQYNIASMPTFLFIKRKE 85

Query: 437 PIDYSGGRQADDI 475
            +    G  A+ +
Sbjct: 86  VVGQFSGANAEKL 98


>U51225-1|AAA96405.1|  692|Anopheles gambiae hexamerin protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 588 VRKETKYNNSIGIDKFFSLFSRGNLNRGGPVF 493
           V  ETKYN+   + +FF  +  G     G +F
Sbjct: 66  VSDETKYNDFAQVAEFFDYYKTGAFLEKGELF 97


>AF020872-1|AAC31875.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 588 VRKETKYNNSIGIDKFFSLFSRGNLNRGGPVF 493
           V  ETKYN+   + +FF  +  G     G +F
Sbjct: 66  VSDETKYNDFAQVAEFFDYYKTGAFLEKGELF 97


>AF020871-1|AAC31874.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 588 VRKETKYNNSIGIDKFFSLFSRGNLNRGGPVF 493
           V  ETKYN+   + +FF  +  G     G +F
Sbjct: 66  VSDETKYNDFAQVAEFFDYYKTGAFLEKGELF 97


>AF020870-1|AAC31873.1|  692|Anopheles gambiae hexamerin A protein.
          Length = 692

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 588 VRKETKYNNSIGIDKFFSLFSRGNLNRGGPVF 493
           V  ETKYN+   + +FF  +  G     G +F
Sbjct: 66  VSDETKYNDFAQVAEFFDYYKTGAFLEKGELF 97


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 475 HQLAEEEDWPPSVEVTSAEQ 534
           H+LA     PP  E TS++Q
Sbjct: 327 HRLAARTSTPPDPETTSSQQ 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,712
Number of Sequences: 2352
Number of extensions: 12785
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)