BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20130
(414 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 125 1e-29
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 125 1e-29
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 125 1e-29
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 125 1e-29
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 125 1e-29
03_01_0034 + 318432-318825,318902-319851 124 3e-29
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 109 1e-24
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 105 2e-23
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 62 1e-10
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 62 1e-10
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 62 1e-10
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 56 1e-08
11_06_0249 + 21697863-21697923,21698119-21698128,21698160-216987... 32 0.21
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 31 0.48
03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669 25 1.9
02_02_0653 - 12655787-12656311 28 2.6
08_01_0146 + 1148535-1148577,1148650-1148918,1148924-1149409,114... 28 3.4
09_06_0070 - 20670387-20670473,20672418-20672645,20673388-206735... 27 4.5
07_03_1342 - 25891761-25892102,25892588-25893135,25893342-258950... 27 7.8
04_04_0864 - 28852252-28854582 27 7.8
04_03_0703 - 18870287-18871351,18871542-18871733 27 7.8
01_06_0161 + 27108920-27109279,27109479-27109598,27110301-271104... 27 7.8
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 125 bits (302), Expect = 1e-29
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 84.6 bits (200), Expect = 3e-17
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNH
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 125 bits (302), Expect = 1e-29
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ KIREE
Sbjct: 279 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 338
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDR+M T+SV PSPKVSDTVVEP
Sbjct: 339 YPDRMMLTFSVFPSPKVSDTVVEP 362
Score = 83.0 bits (196), Expect = 9e-17
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNH
Sbjct: 364 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 407
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 125 bits (302), Expect = 1e-29
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 84.6 bits (200), Expect = 3e-17
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNH
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 125 bits (302), Expect = 1e-29
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 84.6 bits (200), Expect = 3e-17
Identities = 37/44 (84%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TPT+GDLNH
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNH 227
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 125 bits (302), Expect = 1e-29
Identities = 59/84 (70%), Positives = 63/84 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 83.0 bits (196), Expect = 9e-17
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNH
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 227
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 124 bits (299), Expect = 3e-29
Identities = 58/84 (69%), Positives = 63/84 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+D+VLDVVRKEAE+CDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 YPDRMMLTFSVFPSPKVSDTVVEP 182
Score = 83.0 bits (196), Expect = 9e-17
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNH
Sbjct: 184 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 227
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 109 bits (261), Expect = 1e-24
Identities = 59/100 (59%), Positives = 63/100 (63%), Gaps = 16/100 (16%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQ----------------GFQXXXXXXXX 134
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ GFQ
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQDNRVIRQLGSIDNEQSGFQVCHSLGGG 158
Query: 135 XXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 254
KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 TGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 198
Score = 81.0 bits (191), Expect = 3e-16
Identities = 35/44 (79%), Positives = 39/44 (88%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+ P++GDLNH
Sbjct: 200 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNH 243
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 105 bits (251), Expect = 2e-23
Identities = 59/105 (56%), Positives = 63/105 (60%), Gaps = 21/105 (20%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQ---------------------GFQXXX 119
NNWAKGHYTEGAEL+DSVLDVVRKEAE+CDCLQ GFQ
Sbjct: 99 NNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGCRRLLEVHPLTCCESRNMMHGFQVCH 158
Query: 120 XXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 254
KIREEYPDR+M T+SV PSPKVSDTVVEP
Sbjct: 159 SLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEP 203
Score = 83.0 bits (196), Expect = 9e-17
Identities = 36/44 (81%), Positives = 40/44 (90%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVEN DE +DNEALYDICFRTLKL+TP++GDLNH
Sbjct: 205 NATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNH 248
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD LD +RK A++C LQGF ++ +
Sbjct: 101 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + ++V PSP+VS +VVEP
Sbjct: 161 YGKKSKLGFTVYPSPQVSTSVVEP 184
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD LD VRK A++C LQGF ++ +
Sbjct: 101 NNFARGHYTVGKEIVDLCLDRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ PSP+VS VVEP
Sbjct: 161 YGKKSKLGFTIYPSPQVSTAVVEP 184
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 62.5 bits (145), Expect = 1e-10
Identities = 32/84 (38%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD LD +RK A++C LQGF ++ +
Sbjct: 101 NNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + ++V PSP+VS +VVEP
Sbjct: 161 YGKKSKLGFTVYPSPQVSTSVVEP 184
Score = 55.2 bits (127), Expect = 2e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 186 NSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLN 228
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 56.0 bits (129), Expect = 1e-08
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN
Sbjct: 267 NSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLN 309
Score = 49.6 bits (113), Expect = 1e-06
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD LD +RK A++C LQGF ++ +
Sbjct: 161 NNFARGHYTVGREVVDLCLDRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVD 220
Query: 183 YPDRIMNTYSVVPSPK 230
Y + +++ PSP+
Sbjct: 221 YGRKSKLGFTIYPSPQ 236
>11_06_0249 +
21697863-21697923,21698119-21698128,21698160-21698766,
21699011-21699090,21699182-21699263,21699357-21699428,
21700128-21700406
Length = 396
Score = 31.9 bits (69), Expect = 0.21
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = +2
Query: 149 GHPPHLQNQRRVP*QNNEHIF---SCTIT*SVGHSSRTDNATLSVHQLVENTDE 301
GHPP L N + N ++F C +T S R+ +AT NTDE
Sbjct: 191 GHPPDLSNDKACAGNGNGNVFQNAKCVLTTSTKKMKRSASATTRKSLQATNTDE 244
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 30.7 bits (66), Expect = 0.48
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L++ +L N D +DN AL I L L+ PT+ N
Sbjct: 187 NSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTN 229
>03_02_0709 + 10583621-10583626,10583711-10584712,10585304-10585669
Length = 457
Score = 24.6 bits (51), Expect(2) = 1.9
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -1
Query: 168 WR*GGCPYRNRCR 130
W G CPY RCR
Sbjct: 391 WERGACPYGARCR 403
Score = 22.6 bits (46), Expect(2) = 1.9
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 156 GCPYRNRCRRRAS 118
GCPY +RC R S
Sbjct: 433 GCPYGHRCHFRHS 445
>02_02_0653 - 12655787-12656311
Length = 174
Score = 28.3 bits (60), Expect = 2.6
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -1
Query: 66 RRLKLNRRAQHPPCSVPW 13
R + ++ QHPPC++PW
Sbjct: 10 RSIAQQQQQQHPPCNLPW 27
>08_01_0146 +
1148535-1148577,1148650-1148918,1148924-1149409,
1149543-1149905
Length = 386
Score = 27.9 bits (59), Expect = 3.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +2
Query: 140 FRYGHPPHLQNQRRVP*QNNEHIFSCTI 223
+R+G PPHLQ+ + H F+ ++
Sbjct: 54 YRHGEPPHLQDMEKAKLAAANHFFAASV 81
>09_06_0070 -
20670387-20670473,20672418-20672645,20673388-20673508,
20673604-20673702,20673802-20673833
Length = 188
Score = 27.5 bits (58), Expect = 4.5
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 329 YDICFRTLKLSTPTYGDLNHWCR 397
YD C++TL+L+ P L WC+
Sbjct: 21 YD-CYKTLELNKPQIDQLRFWCQ 42
>07_03_1342 -
25891761-25892102,25892588-25893135,25893342-25895012,
25895818-25896745
Length = 1162
Score = 26.6 bits (56), Expect = 7.8
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 168 KIREEYPDRIMNTYSVVPSPKVSDTVVEPTTPHF 269
++ E + T + VP+ + S VV PT+PHF
Sbjct: 705 EVTEPSSSGMAETSAAVPAMEPSPRVVLPTSPHF 738
>04_04_0864 - 28852252-28854582
Length = 776
Score = 26.6 bits (56), Expect = 7.8
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 201 NTYSV-VPSPKVSDTVVEPTTPHFQFIN*LKTQTKPTVST 317
+TY V V K +D +VEP T HF N K K TV+T
Sbjct: 705 STYHVKVTKFKGADVIVEPNTLHFVSTN-QKLSYKVTVTT 743
>04_03_0703 - 18870287-18871351,18871542-18871733
Length = 418
Score = 26.6 bits (56), Expect = 7.8
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = +1
Query: 319 RGSLRYLLPHAKTIHTHIRRPEPLVSLTCP 408
RGS RY TIH IR E LVS+T P
Sbjct: 388 RGS-RYSCEPTPTIHHVIRYVESLVSITAP 416
>01_06_0161 +
27108920-27109279,27109479-27109598,27110301-27110438,
27110680-27110784,27110883-27111051,27111507-27111583,
27111796-27111840,27111984-27112022,27112374-27112457,
27112846-27112884,27112963-27113025,27113109-27113238,
27113319-27113374
Length = 474
Score = 26.6 bits (56), Expect = 7.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -1
Query: 81 PLPFERRLKLNRRAQHPPCSVPWP 10
P P +R L R PPC++P+P
Sbjct: 10 PRPPQRSLATRRTKPGPPCALPFP 33
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,450,759
Number of Sequences: 37544
Number of extensions: 218514
Number of successful extensions: 607
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 598
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 742607976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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