Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20130
(414 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 134 4e-32
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 134 4e-32
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 133 6e-32
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 131 2e-31
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 107 5e-24
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 99 2e-21
SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0) 81 3e-16
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 64 6e-11
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 8e-11
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 63 8e-11
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 63 8e-11
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 63 1e-10
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 1e-10
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 1e-10
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 4e-10
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 60 5e-10
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 1e-09
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 59 1e-09
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 58 2e-09
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-09
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 6e-07
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 50 6e-07
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 45 2e-05
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0) 39 0.002
SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0) 39 0.002
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 34 0.040
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 34 0.053
SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23) 31 0.50
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 29 1.1
SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09) 29 1.5
SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.6
SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8) 28 3.5
SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4) 28 3.5
SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1) 25 4.3
SB_15220| Best HMM Match : VAR1 (HMM E-Value=3) 27 4.6
SB_10986| Best HMM Match : WD40 (HMM E-Value=0.026) 27 6.1
SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2) 27 8.1
SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22) 27 8.1
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 134 bits (323), Expect = 4e-32
Identities = 64/84 (76%), Positives = 65/84 (77%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 159 YPDRIMNTFSVVPSPKVSDTVVEP 182
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 134 bits (323), Expect = 4e-32
Identities = 64/84 (76%), Positives = 65/84 (77%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ KIREE
Sbjct: 312 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREE 371
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 372 YPDRIMNTFSVVPSPKVSDTVVEP 395
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 397 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 440
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 133 bits (321), Expect = 6e-32
Identities = 63/84 (75%), Positives = 65/84 (77%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAELVDSVLDVVRKEAESCDC+QGFQ KIREE
Sbjct: 44 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMVTLLILKIREE 103
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIMNT+SVVPSPKVSDTVVEP
Sbjct: 104 YPDRIMNTFSVVPSPKVSDTVVEP 127
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 129 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 172
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 131 bits (317), Expect = 2e-31
Identities = 61/84 (72%), Positives = 65/84 (77%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHYTEGAEL+DSVLDVVRKEAESCDC+QGFQ KIREE
Sbjct: 99 NNWAKGHYTEGAELMDSVLDVVRKEAESCDCIQGFQLTHSLGGGTGSGMGTLLISKIREE 158
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
YPDRIMNT+S+VPSPKVSDTVVEP
Sbjct: 159 YPDRIMNTFSIVPSPKVSDTVVEP 182
Score = 98.7 bits (235), Expect = 2e-21
Identities = 43/44 (97%), Positives = 44/44 (100%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NATLSVHQLVENTDETYCIDNEALYDICFRTLKL+TPTYGDLNH
Sbjct: 184 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNH 227
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 107 bits (256), Expect = 5e-24
Identities = 48/86 (55%), Positives = 58/86 (67%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKGHY+EGAEL+D++ DV+RKEAE+CDC+QG Q KIREE
Sbjct: 55 NNWAKGHYSEGAELIDNIFDVLRKEAENCDCMQGVQLIQALGGGTGSGLGTLILSKIREE 114
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEPTT 260
YPDRI++ +SVVPSPKV PTT
Sbjct: 115 YPDRILSAFSVVPSPKVRTKYQGPTT 140
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/91 (50%), Positives = 58/91 (63%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWAKG YTEGAEL+DS +D +RK AE+CD +QGFQ KIREE
Sbjct: 7 NNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTGSGLGSLLLSKIREE 66
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEPTTPHFQF 275
YPDR+++++ V+PSP VS+TV EP F
Sbjct: 67 YPDRLVSSFCVLPSPLVSETVTEPYNATLSF 97
Score = 64.9 bits (151), Expect = 2e-11
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
NATLS HQLV+ D CIDNEALY+IC+ LK TPTY +LN
Sbjct: 92 NATLSFHQLVDVADAAICIDNEALYNICYNVLKRETPTYSELN 134
>SB_17880| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 375
Score = 81.4 bits (192), Expect = 3e-16
Identities = 34/44 (77%), Positives = 39/44 (88%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLNH 388
NA LSVHQL+E TDE +CIDNEALYDIC++TLKL+T TY DLNH
Sbjct: 89 NAALSVHQLLETTDEVFCIDNEALYDICYKTLKLNTTTYSDLNH 132
Score = 62.5 bits (145), Expect = 1e-10
Identities = 29/63 (46%), Positives = 38/63 (60%)
Frame = +3
Query: 66 VRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTV 245
+RKEAE CD +QGFQ ++EEYPDRI+++ SV PSP+VS+ V
Sbjct: 1 MRKEAEDCDAIQGFQLLHSLGGGTGSGLGTLILYHLQEEYPDRILSSVSVFPSPRVSEIV 60
Query: 246 VEP 254
VEP
Sbjct: 61 VEP 63
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 63.7 bits (148), Expect = 6e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D VLD +RK A+ C LQGF ++ +
Sbjct: 686 NNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 745
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P+VS VVEP
Sbjct: 746 YGKKSKLEFAIYPAPQVSTAVVEP 769
Score = 62.5 bits (145), Expect = 1e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD VLD +RK A+ C LQGF ++ +
Sbjct: 165 NNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 224
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 225 YGKKSKLEFAIYPAPQISTAVVEP 248
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 250 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 292
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 771 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 813
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 63.3 bits (147), Expect = 8e-11
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D VLD +RK A+ C LQGF ++ +
Sbjct: 38 NNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 97
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 98 YGKKSKLEFAIYPAPQISTAVVEP 121
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 123 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 165
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 63.3 bits (147), Expect = 8e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD VLD +RK A+ C LQGF ++ +
Sbjct: 101 NNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P+VS VVEP
Sbjct: 161 YGKKSKLEFAIYPAPQVSTAVVEP 184
Score = 63.3 bits (147), Expect = 8e-11
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+VD VLD +RK A+ C LQGF ++ +
Sbjct: 534 NNYARGHYTVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 593
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P+VS VVEP
Sbjct: 594 YGKKSKLEFAIYPAPQVSTAVVEP 617
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 186 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 619 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 661
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 63.3 bits (147), Expect = 8e-11
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G EL+D VLD +RK A+ C LQGF ++ +
Sbjct: 26 NNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 85
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 86 YGKKSKLEFAIYPAPQISTAVVEP 109
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 111 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 153
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/84 (35%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D VLD +RK A+ C LQGF ++ +
Sbjct: 100 NNYARGHYTVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 159
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P+VS VVEP
Sbjct: 160 YGKKSKLEFAIYPAPQVSTAVVEP 183
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 185 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 227
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 62.9 bits (146), Expect = 1e-10
Identities = 29/84 (34%), Positives = 46/84 (54%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D+VLD +RK A+ C LQGF ++ +
Sbjct: 101 NNYARGHYTVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 161 YGKKSKLEFAIYPAPQISTAVVEP 184
Score = 50.8 bits (116), Expect = 4e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 186 NSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 228
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 62.5 bits (145), Expect = 1e-10
Identities = 29/84 (34%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D VLD +RK A+ C LQGF ++ +
Sbjct: 905 NNYARGHYTVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 964
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 965 YGKKSKLEFAIYPAPQISTAVVEP 988
Score = 59.7 bits (138), Expect = 9e-10
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E +D VLD +RK A+ C LQGF ++ +
Sbjct: 472 NNYARGHYTVGKEQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVD 531
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P +S VVEP
Sbjct: 532 YGKKSKLEFAIYPAPHISSAVVEP 555
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 557 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 599
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 990 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 1032
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G + +D+VLD +RK A+ C LQGF ++ +
Sbjct: 519 NNYARGHYTVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTGSGFSALLLERLSVD 578
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 579 YGKKSKLEFAIYPAPQISTAVVEP 602
Score = 59.7 bits (138), Expect = 9e-10
Identities = 28/84 (33%), Positives = 45/84 (53%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G +L++ VLD +RK A+ C LQGF ++ +
Sbjct: 86 NNYARGHYTVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 145
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 146 YGKKSKLEFAIYPAPQISTAVVEP 169
Score = 50.8 bits (116), Expect = 4e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 604 NSVLTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 646
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 171 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 213
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 60.5 bits (140), Expect = 5e-10
Identities = 29/84 (34%), Positives = 44/84 (52%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E++D VLD RK A+ C LQGF ++ +
Sbjct: 101 NNYARGHYTIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTGSGFASLLMERLSVD 160
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + +++ P+P++S VVEP
Sbjct: 161 YGKKSKLEFAIYPAPQISTAVVEP 184
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 186 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIDRPTYTNLN 228
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E +D LD +RK A+ C LQGF ++ +
Sbjct: 66 NNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 125
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + ++V P+P++S VVEP
Sbjct: 126 YGKKSKLEFAVYPAPQISTAVVEP 149
Score = 51.6 bits (118), Expect = 2e-07
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ LS H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 151 NSILSTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 193
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 59.3 bits (137), Expect = 1e-09
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E +D LD +RK A+ C LQGF ++ +
Sbjct: 26 NNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVD 85
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + ++V P+P++S VVEP
Sbjct: 86 YGKKSKLEFAVYPAPQISTAVVEP 109
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 111 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 153
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 58.4 bits (135), Expect = 2e-09
Identities = 29/84 (34%), Positives = 43/84 (51%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G + VD VLD +RK A+ C LQGF ++ +
Sbjct: 91 NNYARGHYTIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTGSGFSSLLMERLSVD 150
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + ++V P+P ++ VVEP
Sbjct: 151 YGKKSKLEFAVYPAPHIASAVVEP 174
Score = 48.8 bits (111), Expect = 2e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + P+Y +LN
Sbjct: 176 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLN 218
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 58.0 bits (134), Expect = 3e-09
Identities = 28/84 (33%), Positives = 42/84 (50%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NN+A+GHYT G E+V+ V+D +RK + C LQGF + +
Sbjct: 1012 NNYARGHYTIGKEMVEVVMDKIRKMTDQCSGLQGFLIFHSFGGGTGSGFASLITEHLSVD 1071
Query: 183 YPDRIMNTYSVVPSPKVSDTVVEP 254
Y + ++V P+P +S VVEP
Sbjct: 1072 YGKKSKLEFAVYPAPHISTAVVEP 1095
Score = 49.6 bits (113), Expect = 1e-06
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D T+ +DNEA+YD+C R L + P Y +LN
Sbjct: 1097 NSVLTTHTTLEHSDCTFMVDNEAIYDLCRRNLDVERPGYANLN 1139
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 317 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 359
Score = 32.3 bits (70), Expect = 0.16
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 72 KEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVE 251
K A+ C LQGF ++ +Y R ++V P+P++S VVE
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTGSGFSSLLMERLSVDYGKRSKLEFAVYPAPQISTAVVE 314
Query: 252 P 254
P
Sbjct: 315 P 315
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 50.4 bits (115), Expect = 6e-07
Identities = 20/43 (46%), Positives = 30/43 (69%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L+ H +E++D + +DNEA+YDIC R L + PTY +LN
Sbjct: 61 NSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLN 103
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/59 (23%), Positives = 25/59 (42%)
Frame = +3
Query: 78 AESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPSPKVSDTVVEP 254
A+ C LQGF ++ +Y + +++ P+P++S VVEP
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEP 59
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 45.2 bits (102), Expect = 2e-05
Identities = 23/73 (31%), Positives = 32/73 (43%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREE 182
NNWA G G + +D VLD+V++E E CD L GF +R+
Sbjct: 107 NNWAHGFSEHGPKSIDKVLDLVQREVEKCDRLDGFLTLLSLAGGTGSGVGAFVTNSLRDF 166
Query: 183 YPDRIMNTYSVVP 221
YP+ + V P
Sbjct: 167 YPNSFIVNNVVWP 179
Score = 35.1 bits (77), Expect = 0.023
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
NATL++ QL +++D ++N+ L IC + L L ++ D+N
Sbjct: 191 NATLTLAQLYKSSDAIIIVENDKLQKICSKLLNLKHISFRDIN 233
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 39.9 bits (89), Expect = 8e-04
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRK 74
NN+A+GHYT G EL+D VLD +RK
Sbjct: 26 NNYARGHYTVGKELIDLVLDRIRK 49
>SB_51150| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 232
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 311 IDNEALYDICFRTLKLSTPTYGDLN 385
+DNEA+YDIC R L + PTY +LN
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLN 26
>SB_23895| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 250
Score = 38.7 bits (86), Expect = 0.002
Identities = 15/25 (60%), Positives = 19/25 (76%)
Frame = +2
Query: 311 IDNEALYDICFRTLKLSTPTYGDLN 385
+DNEA+YDIC R L + PTY +LN
Sbjct: 2 VDNEAIYDICRRNLDIERPTYTNLN 26
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 34.3 bits (75), Expect = 0.040
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 3 NNWAKGHYTEGAELVDSVLDVVRK 74
NN+A+GHYT G E +D L+ +RK
Sbjct: 26 NNYARGHYTVGKEHIDLTLEKIRK 49
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.9 bits (74), Expect = 0.053
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDIC 340
N+ L++HQL E+ D I+N+AL DIC
Sbjct: 197 NSVLAMHQLTEHADCVLPIENQALVDIC 224
>SB_16885| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 31.9 bits (69), Expect = 0.21
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 257 NATLSVHQLVENTDETYCIDNEALYDICFRTLKLSTPTYGDLN 385
N+ L++ +L +N D +DN AL I L++ PT+ +N
Sbjct: 223 NSILTLKRLTQNADCVVVLDNTALNRIAADRLRIPNPTFSQVN 265
>SB_8591| Best HMM Match : DUF601 (HMM E-Value=0.23)
Length = 3368
Score = 30.7 bits (66), Expect = 0.50
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3
Query: 85 DSASFRTTSKTESTSSAPSV*CPLAQL 5
DSASFR +S + ++ SV CPL QL
Sbjct: 2663 DSASFRNSSNDKESADPSSVRCPLLQL 2689
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 29.5 bits (63), Expect = 1.1
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Frame = +3
Query: 3 NNWAKGHYTE-----GAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 167
NN+A G++ G L+ +D +RKE E CD G
Sbjct: 78 NNFALGYHGNSIDEGGTSLLHMTMDAMRKEVERCDSFAGTIVMHSLTGGTGSGLGARLVE 137
Query: 168 KIREEYPDRIMNTYSVVPSPKVS 236
+ + YP + + SV SP VS
Sbjct: 138 TLSDAYP--LAHVMSVAVSPHVS 158
>SB_52687| Best HMM Match : Myb_DNA-binding (HMM E-Value=2.7e-09)
Length = 166
Score = 29.1 bits (62), Expect = 1.5
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +2
Query: 80 GIV*LPPGIPTDTLARRRHRFRYGHPPH 163
G+V LPPG+ T H RYGHP H
Sbjct: 7 GMVTLPPGMVTLPPGMVTHFTRYGHPFH 34
>SB_50370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1059
Score = 28.3 bits (60), Expect = 2.6
Identities = 9/23 (39%), Positives = 17/23 (73%)
Frame = +3
Query: 168 KIREEYPDRIMNTYSVVPSPKVS 236
K++E+YPD I++++ + P K S
Sbjct: 486 KLQEQYPDHILSSFELFPCEKAS 508
>SB_53927| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.8)
Length = 582
Score = 27.9 bits (59), Expect = 3.5
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 48 DSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 224
D+ D +R AE CD LQGFQ +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_39519| Best HMM Match : Adeno_E3_CR1 (HMM E-Value=1.4)
Length = 582
Score = 27.9 bits (59), Expect = 3.5
Identities = 19/59 (32%), Positives = 25/59 (42%)
Frame = +3
Query: 48 DSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXXKIREEYPDRIMNTYSVVPS 224
D+ D +R AE CD LQGFQ +R+EY + M T VP+
Sbjct: 220 DNFEDGLRFFAEECDRLQGFQ-ILADVHNGFGGLMSQCLEDLRDEYNSKSMITVGCVPA 277
>SB_56402| Best HMM Match : Extensin_2 (HMM E-Value=1.1)
Length = 352
Score = 25.4 bits (53), Expect(2) = 4.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = +2
Query: 317 NEALYDICFRTLKLSTPTYG 376
N L+++ + TL + TPTYG
Sbjct: 182 NPNLWNLTYGTLSIETPTYG 201
Score = 20.6 bits (41), Expect(2) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 362 TPTYGDLNH 388
TPTYG L H
Sbjct: 231 TPTYGTLTH 239
>SB_15220| Best HMM Match : VAR1 (HMM E-Value=3)
Length = 310
Score = 27.5 bits (58), Expect = 4.6
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 164 LQNQRRVP*QNNEHIFSCTIT*SVGHSSRTDNATLSVHQLVENTDETYCIDNEALYD 334
++ QRRV N + + + + R DN T +Q E +E C+DN+ D
Sbjct: 1 MRKQRRVRVHNKTRVNNQNYEKN-NEALRVDNTTRVSNQNYEKNNEALCVDNKTRVD 56
>SB_10986| Best HMM Match : WD40 (HMM E-Value=0.026)
Length = 528
Score = 27.1 bits (57), Expect = 6.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 113 DTLARRRHRFRYGHPPHLQNQRRVP*QNNEHIFSC 217
DTL R H FRY +PP + H+ SC
Sbjct: 238 DTLGERSHIFRYENPPKSYITHKNT-TTTRHVLSC 271
>SB_7761| Best HMM Match : Drf_FH1 (HMM E-Value=8.2)
Length = 233
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 174 REEYPDRIMNTYSVVPSPKVSDTVVEPTTPHFQFI-N*LKTQTKPTVSTTRLSTISAS 344
+EE + + P+ K S T V PTT + +KT KP ++TR ++ +
Sbjct: 15 KEEVTTKFVEAVEAGPTSKKSLTTVTPTTESVDVVFPKIKTTKKPDNTSTRQRPVTTA 72
>SB_8083| Best HMM Match : Lectin_C (HMM E-Value=3.8e-22)
Length = 3445
Score = 26.6 bits (56), Expect = 8.1
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 174 REEYPDRIMNTYSVVPSPKVSDTVVEPTTPHFQFI-N*LKTQTKPTVSTTRLSTISAS 344
+EE + + P+ K S T V PTT + +KT KP ++TR ++ +
Sbjct: 143 KEEVTTKFVEAVEAGPTSKKSLTTVTPTTESVDVVFPKIKTTKKPDNTSTRQRPVTTA 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,111,740
Number of Sequences: 59808
Number of extensions: 251214
Number of successful extensions: 750
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 725
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 764823134
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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