Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20128
(704 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 151 2e-35
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 149 5e-35
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 128 1e-28
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 122 1e-26
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 120 3e-26
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 120 3e-26
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 120 5e-26
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 119 8e-26
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 118 1e-25
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 118 1e-25
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 118 1e-25
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 117 3e-25
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 116 6e-25
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 116 6e-25
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 114 2e-24
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 114 2e-24
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 113 4e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 112 7e-24
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 109 5e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 103 3e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 101 2e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 101 2e-20
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 101 2e-20
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 101 2e-20
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 100 3e-20
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 100 4e-20
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 99 5e-20
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 92 1e-17
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 90 6e-17
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 89 1e-16
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 81 3e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 75 2e-12
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 67 3e-10
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 67 5e-10
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 66 6e-10
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 64 2e-09
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 63 6e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 62 1e-08
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 61 3e-08
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 60 4e-08
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 56 1e-06
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 54 3e-06
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 54 5e-06
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 52 1e-05
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 52 2e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 51 2e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 51 3e-05
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 50 4e-05
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 50 6e-05
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 49 1e-04
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 49 1e-04
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 48 2e-04
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 48 3e-04
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 46 0.001
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 46 0.001
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 45 0.002
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 45 0.002
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 44 0.003
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 43 0.008
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 43 0.008
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 41 0.026
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 40 0.045
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 40 0.079
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 40 0.079
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 39 0.10
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 39 0.14
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 39 0.14
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 38 0.18
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 38 0.18
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 38 0.24
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 37 0.55
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 37 0.55
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 36 0.73
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 36 0.73
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 36 0.97
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 36 0.97
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 36 1.3
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 35 1.7
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 2.2
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 34 3.9
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 34 3.9
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 33 6.8
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 33 6.8
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 33 6.8
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 33 6.8
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 151 bits (366), Expect = 2e-35
Identities = 82/147 (55%), Positives = 90/147 (61%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 89 MAFPRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLH 148
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ + SFDQ+PLFV AVGITAF AGAIT+LLT
Sbjct: 149 LAGISSILGAINFITTIINMRMNNLSFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLT 208
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNTS FDPAGGGDPILY HLF F+
Sbjct: 209 DRNLNTSFFDPAGGGDPILYQHLFWFF 235
Score = 81.0 bits (191), Expect = 3e-14
Identities = 61/152 (40%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Frame = +1
Query: 4 HETNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXX 183
+ TNHKDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 5 YSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIF 64
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQDEQ 363
N LVPL+LGAP+ F PP L + +
Sbjct: 65 FMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLISSSI--VENGAGTG 122
Query: 364 FTPHFHLISHIEE--DP*ILLFFSLHLAGISS 453
+T + L S+I L FSLHLAGISS
Sbjct: 123 WTVYPPLSSNIAHGGSSVDLAIFSLHLAGISS 154
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 149 bits (362), Expect = 5e-35
Identities = 81/147 (55%), Positives = 89/147 (60%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIF
Sbjct: 65 MAFPRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLH 124
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ I SFDQ+PLF+ AVGITA AGAIT+LLT
Sbjct: 125 LAGISSILGAINFITTIINMRINKMSFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLT 184
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNTS FDPAGGGDPILY HLF F+
Sbjct: 185 DRNLNTSFFDPAGGGDPILYQHLFWFF 211
Score = 63.7 bits (148), Expect = 4e-09
Identities = 49/120 (40%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE*HSHE*II 279
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAP+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 280 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEE--DP*ILLFFSLHLAGISS 453
F PP L + + +T + L S+I L FSLHLAGISS
Sbjct: 73 MSFWLLPPSLILLISSSI--VENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISS 130
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 128 bits (310), Expect = 1e-28
Identities = 71/139 (51%), Positives = 83/139 (59%)
Frame = -2
Query: 673 YKIGSPPPAGSKMDVFKFRSVNNIVIAPAKTGSDNNNKNAVIPTAHTNKGN*SNDXXXXX 494
+ IGSPPPAGSK +VFKFRSV +IVIAPA TGS++N+K AV T TN G S
Sbjct: 4 WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVIPADR 63
Query: 493 XXXXX**NXXXXXXXXXXLNVVKKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEIN 314
+KI STD P CAI SGG TVHPVP P STI L +
Sbjct: 64 MLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKS 123
Query: 313 NIREGGRSQNLILFIRGNA 257
++EGG +QNL+LFIRGNA
Sbjct: 124 KVKEGGSNQNLMLFIRGNA 142
Score = 83.4 bits (197), Expect = 5e-15
Identities = 47/93 (50%), Positives = 53/93 (56%)
Frame = -1
Query: 308 KGGG*ESKSYIIYSWECYSGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 129
K GG + SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 128 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 30
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 122 bits (293), Expect = 1e-26
Identities = 69/147 (46%), Positives = 79/147 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLH 151
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S + +LPLFV A+ +TA AGAIT+LLT
Sbjct: 152 LSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLT 211
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NTS +DPAGGGDPILY HLF F+
Sbjct: 212 DRNFNTSFYDPAGGGDPILYQHLFWFF 238
Score = 51.2 bits (117), Expect = 2e-05
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 2/152 (1%)
Frame = +1
Query: 4 HETNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 177
+ TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 178 XXXXXXXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQD 357
N LVP+++GAP+ F PP L +
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 358 EQFTPHFHLISHIEEDP*ILLFFSLHLAGISS 453
P + L FSLHL+GISS
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 120 bits (290), Expect = 3e-26
Identities = 68/147 (46%), Positives = 81/147 (55%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NNI F +VE G+GTG TVYPPLS +H G +VDLAIF
Sbjct: 95 MAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLH 154
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S + +LPLFV +V +TAF AGAIT+LLT
Sbjct: 155 LSGVSSILGSINFITTIFNMRGPGMTMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLT 214
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NT+ FDPAGGGDPILY HLF F+
Sbjct: 215 DRNFNTTFFDPAGGGDPILYQHLFWFF 241
Score = 56.4 bits (130), Expect = 6e-07
Identities = 45/150 (30%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 183
TNHKDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 11 TNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIF 70
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQDEQ 363
N VP+++GAP+ F PP L L ++
Sbjct: 71 FMVMPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSLLLLLSSALVEVGSGTGWT 130
Query: 364 FTPHFHLISHIEEDP*ILLFFSLHLAGISS 453
P I+ L FSLHL+G+SS
Sbjct: 131 VYPPLSGITSHSGGAVDLAIFSLHLSGVSS 160
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 120 bits (290), Expect = 3e-26
Identities = 68/144 (47%), Positives = 77/144 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLH 151
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S + +LPLFV A+ +TA AGAIT+LLT
Sbjct: 152 LSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLT 211
Query: 615 DRNLNTSIFDPAGGGDPILYHHLF 686
DRN NTS +DPAGGGDPILY HLF
Sbjct: 212 DRNFNTSFYDPAGGGDPILYQHLF 235
Score = 51.2 bits (117), Expect = 2e-05
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 2/152 (1%)
Frame = +1
Query: 4 HETNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 177
+ TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 178 XXXXXXXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQD 357
N LVP+++GAP+ F PP L +
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 358 EQFTPHFHLISHIEEDP*ILLFFSLHLAGISS 453
P + L FSLHL+GISS
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 120 bits (288), Expect = 5e-26
Identities = 68/144 (47%), Positives = 77/144 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIF
Sbjct: 75 MAFPRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLH 134
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ + + LFV +V ITA AGAIT+LLT
Sbjct: 135 LAGVSSILGAVNFITTVINMRWGAMKIELVSLFVWSVKITAILLLLSLPVLAGAITMLLT 194
Query: 615 DRNLNTSIFDPAGGGDPILYHHLF 686
DRN NTS FDPAGGGDPILY HLF
Sbjct: 195 DRNFNTSFFDPAGGGDPILYQHLF 218
Score = 54.4 bits (125), Expect = 3e-06
Identities = 26/52 (50%), Positives = 31/52 (59%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE 255
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAP+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPD 74
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 119 bits (286), Expect = 8e-26
Identities = 70/147 (47%), Positives = 80/147 (54%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIF
Sbjct: 93 MAFPRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLH 152
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ S Q PLFV +V ITA A IT+LLT
Sbjct: 153 LAGISSILGAINFITTAINMKPPAISQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLT 212
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNT+ FDPAGGGDPILY HLF F+
Sbjct: 213 DRNLNTTFFDPAGGGDPILYQHLFWFF 239
Score = 72.9 bits (171), Expect = 7e-12
Identities = 38/82 (46%), Positives = 43/82 (52%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 189
TNHKDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 11 TNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFM 70
Query: 190 XXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 71 VMPIMIGGFGNWLVPLMIGAPD 92
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 118 bits (285), Expect = 1e-25
Identities = 67/147 (45%), Positives = 80/147 (54%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NNI F +VE GAGTG TVYPPL+S AH G SVD+AIF
Sbjct: 93 MAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLH 152
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ + ++PLFV +V ITA AGAIT+LLT
Sbjct: 153 LAGLSSILGAMNFITTVMNMRTPGMTMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLT 212
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DR NT+ FDPAGGGDPILY HLF F+
Sbjct: 213 DRYFNTTFFDPAGGGDPILYQHLFWFF 239
Score = 65.3 bits (152), Expect = 1e-09
Identities = 47/147 (31%), Positives = 59/147 (40%)
Frame = +1
Query: 13 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 192
NHKDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 12 NHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLV 71
Query: 193 XXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQDEQFTP 372
N VPL++GAP+ F PP L+ L + P
Sbjct: 72 MPTMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYP 131
Query: 373 HFHLISHIEEDP*ILLFFSLHLAGISS 453
I + FSLHLAG+SS
Sbjct: 132 PLASIQAHSGGSVDMAIFSLHLAGLSS 158
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 118 bits (284), Expect = 1e-25
Identities = 72/144 (50%), Positives = 80/144 (55%)
Frame = +3
Query: 261 FPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTTFS 440
FPR N+ F VE GAGTG TV PPLS+NIAH G SVDLAIF +
Sbjct: 13 FPRXINMSFWFLPPXLSFFLXSSXVEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMA 72
Query: 441 XXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDR 620
+ ++PLFV AV ITA AGAIT+LLTDR
Sbjct: 73 GVXSILGAINFISTVLNMRPSGMTPXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDR 132
Query: 621 NLNTSIFDPAGGGDPILYHHLFDF 692
N+NTS FDPAGGGDPILY HLF F
Sbjct: 133 NINTSFFDPAGGGDPILYQHLFWF 156
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 118 bits (284), Expect = 1e-25
Identities = 68/150 (45%), Positives = 81/150 (54%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S +AFPR+NNI F +VE G GTG TVYPPLSS +H G +VDLAIF
Sbjct: 97 SPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIF 156
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
S S ++PLFV ++ +TAF AGAIT+
Sbjct: 157 SLHISGASSILGAVNFISTILNMRSPGQSMYRIPLFVWSILVTAFLLLLAVPVLAGAITM 216
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LLTDRN NTS FD +GGGDPILY HLF F+
Sbjct: 217 LLTDRNFNTSFFDASGGGDPILYQHLFWFF 246
Score = 53.6 bits (123), Expect = 5e-06
Identities = 44/150 (29%), Positives = 58/150 (38%), Gaps = 2/150 (1%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXX 183
TNHKDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 16 TNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIF 75
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQDEQ 363
N LVP+++G+P+ F PP L L ++
Sbjct: 76 FMVMPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSLCLLLMSALVEVGVGTGWT 135
Query: 364 FTPHFHLISHIEEDP*ILLFFSLHLAGISS 453
P I L FSLH++G SS
Sbjct: 136 VYPPLSSIQSHSGGAVDLAIFSLHISGASS 165
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 117 bits (281), Expect = 3e-25
Identities = 68/147 (46%), Positives = 78/147 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 92 MAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH 151
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ S Q PLFV AV +TA A IT+LLT
Sbjct: 152 LAGVSSILGAINFITTTINMKPPTISQYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLT 211
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNT+ FDPAGGGDPILY HLF F+
Sbjct: 212 DRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 189
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 190 XXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 70 VMPILIGGFGNWLVPLMIGAPD 91
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 116 bits (279), Expect = 6e-25
Identities = 67/150 (44%), Positives = 80/150 (53%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
+T AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
+ + +LPLFV ++ ITAF + IT+
Sbjct: 150 ALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITM 209
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F+ +GGGDPILY HLF F+
Sbjct: 210 LLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 116 bits (279), Expect = 6e-25
Identities = 67/150 (44%), Positives = 80/150 (53%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
+T AFPRINNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
+ + +LPLFV ++ ITAF + IT+
Sbjct: 150 ALHLTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWSIFITAFLLLLSLPVLSAGITM 209
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F+ +GGGDPILY HLF F+
Sbjct: 210 LLLDRNFNTSFFEVSGGGDPILYEHLFWFF 239
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 114 bits (275), Expect = 2e-24
Identities = 66/147 (44%), Positives = 78/147 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 92 MAFPRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH 151
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ + Q PLFV +V +TA A IT+LLT
Sbjct: 152 LAGVSSILGAINFITTIINMKPPAITQYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLT 211
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNT+ FDPAGGGDPILY HLF F+
Sbjct: 212 DRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 70.5 bits (165), Expect = 4e-11
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 189
TNHKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 10 TNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFM 69
Query: 190 XXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 70 VMPVMIGGFGNWLVPLMIGAPD 91
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 114 bits (274), Expect = 2e-24
Identities = 66/147 (44%), Positives = 78/147 (53%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IF
Sbjct: 92 MAFPRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLH 151
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ + Q PLFV +V ITA A IT+LLT
Sbjct: 152 LAGVSSILGAINFITTIINMKPPAMTQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLT 211
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNT+ FDPAGGGDPILY HLF F+
Sbjct: 212 DRNLNTTFFDPAGGGDPILYQHLFWFF 238
Score = 68.9 bits (161), Expect = 1e-10
Identities = 36/82 (43%), Positives = 42/82 (51%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 189
TNHKDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 10 TNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFM 69
Query: 190 XXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 70 VMPIMIGGFGNWLVPLMIGAPD 91
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 113 bits (272), Expect = 4e-24
Identities = 66/150 (44%), Positives = 79/150 (52%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
+T AFPRINNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF
Sbjct: 90 ATDTAFPRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIF 149
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
+ + +LPLFV A+ ITA + +T+
Sbjct: 150 ALHMTSISSLLGAINFIVTTLNMRTNGMTMHKLPLFVWAILITAVLLLLTLPVLSAGVTM 209
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F+ AGGGDPILY HLF F+
Sbjct: 210 LLLDRNFNTSFFEVAGGGDPILYEHLFWFF 239
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 112 bits (270), Expect = 7e-24
Identities = 65/150 (43%), Positives = 79/150 (52%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
+T ++FPRIN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIF
Sbjct: 90 ATDMSFPRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIF 149
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
+ S ++PLFV A+ ITAF + IT+
Sbjct: 150 SLHLTSISSLLGAINFIVTTLNMRTNGMSMHKMPLFVWAIFITAFLLLLSLPVLSAGITM 209
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F+ AGGGDPI Y H F F+
Sbjct: 210 LLMDRNFNTSFFEVAGGGDPIFYQHAFWFF 239
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 109 bits (263), Expect = 5e-23
Identities = 62/150 (41%), Positives = 77/150 (51%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S ++FPR+NN+ F + G GTG TVYPPLS + H G SVDL IF
Sbjct: 73 SPDMSFPRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIF 132
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
+ + D++ LF +V ITA AGAIT+
Sbjct: 133 SLHLAGASSIMGAVNFITTILNMRSNLFNMDKMSLFSWSVFITAILLLLSLPVLAGAITM 192
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LLTDRN+NTS FDP+GGGDPILY HLF F+
Sbjct: 193 LLTDRNMNTSFFDPSGGGDPILYQHLFWFF 222
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE 255
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+P+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPD 75
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 103 bits (248), Expect = 3e-21
Identities = 62/147 (42%), Positives = 73/147 (49%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+ FPR+NNI + +ENG GTG T+YPPLS +H G SVDLAIF
Sbjct: 93 MGFPRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLH 152
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S +L LF AV ITA AG IT++LT
Sbjct: 153 LSGISSLLGAMNFMTTTFNMRSPGIRLHKLILFAWAVVITAVLLLLSLPVLAGGITMVLT 212
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NTS F+ AGGGDPILY HLF F+
Sbjct: 213 DRNFNTSFFEVAGGGDPILYQHLFWFF 239
Score = 45.6 bits (103), Expect = 0.001
Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 186
+N KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 10 SNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFF 69
Query: 187 XXXXXXXXXXXN*LVPLILGAPE 255
N L+PL LG P+
Sbjct: 70 MVMPALIGGFGNFLLPLGLGGPD 92
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 101 bits (242), Expect = 2e-20
Identities = 54/147 (36%), Positives = 75/147 (51%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ + +++ GAG G T YPP+S+ R+VD AIF
Sbjct: 198 MAFPRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVH 257
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S + ++PLF +V +TA+ AGAIT+LLT
Sbjct: 258 VSGASSILGSINFITTFLNMRAPGMTLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLT 317
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN T+ FDPAGGGDPIL+ H+F F+
Sbjct: 318 DRNFGTTFFDPAGGGDPILFQHIFWFF 344
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 101 bits (241), Expect = 2e-20
Identities = 56/150 (37%), Positives = 75/150 (50%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
S + +LPLFV +V ITA A +T+
Sbjct: 167 ALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTM 226
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F +GGGDP+LY H+F F+
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 101 bits (241), Expect = 2e-20
Identities = 56/150 (37%), Positives = 75/150 (50%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
S + +LPLFV +V ITA A +T+
Sbjct: 167 ALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTM 226
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F +GGGDP+LY H+F F+
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 101 bits (241), Expect = 2e-20
Identities = 56/150 (37%), Positives = 75/150 (50%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
S + +LPLFV +V ITA A +T+
Sbjct: 167 ALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTM 226
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
LL DRN NTS F +GGGDP+LY H+F F+
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIFWFF 256
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 100 bits (240), Expect = 3e-20
Identities = 59/147 (40%), Positives = 71/147 (48%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
++FPR+NN F E G GTG TVYPPLSS +H G SVDL IF
Sbjct: 96 MSFPRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFH 155
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ LPLFV +V +T+F A AIT+LL
Sbjct: 156 LVGIGSIVAAINFICTIFYYKNEAMFNKDLPLFVWSVAVTSFLVIVAIPVLAAAITLLLF 215
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NTS +DP GGGD +LY HLF F+
Sbjct: 216 DRNFNTSFYDPVGGGDVVLYQHLFWFF 242
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 100 bits (239), Expect = 4e-20
Identities = 60/147 (40%), Positives = 72/147 (48%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ + I+ENG GTG T+YPPLS +H VDL IF
Sbjct: 119 MAFPRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLH 178
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S +L LF AV ITA A AIT+LLT
Sbjct: 179 LSGISSLLGAINFIATLLNMRSPGIKLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLT 238
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRNLNTS ++ AGGGD ILY HLF F+
Sbjct: 239 DRNLNTSFYELAGGGDAILYQHLFWFF 265
Score = 39.9 bits (89), Expect = 0.060
Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXX 186
+N KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 36 SNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFF 95
Query: 187 XXXXXXXXXXXN*LVPLILGAPE 255
N L+P+++G P+
Sbjct: 96 MVMPALIGGFGNFLLPILIGGPD 118
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 99 bits (238), Expect = 5e-20
Identities = 55/147 (37%), Positives = 73/147 (49%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S AFPRINN+ F +++ G G+G T+YPPL+S +H G S+D+AIF
Sbjct: 107 SNDTAFPRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIF 166
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
S + +LPLFV +V ITA A +T+
Sbjct: 167 ALHLSGLSSIFGAINLMVTIINMRANGMDYSKLPLFVWSVLITAVLIILALPVLAAGLTM 226
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLF 686
LL DRN NTS F +GGGDP+LY H+F
Sbjct: 227 LLMDRNFNTSFFVVSGGGDPLLYEHIF 253
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 92.3 bits (219), Expect = 1e-17
Identities = 55/147 (37%), Positives = 70/147 (47%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AF R+NNI F +VE GAGTG TVY PL+ +H G +VDLAIF
Sbjct: 98 MAFARLNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLH 157
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S ++ +PLF AV TA A +T+ +
Sbjct: 158 LSGFSSLLGAINFITTFINMRTIGMKYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIF 217
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NTS F+ AGGGD +LY HLF +W
Sbjct: 218 DRNFNTSFFEYAGGGDAVLYQHLFYWW 244
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 89.8 bits (213), Expect = 6e-17
Identities = 58/151 (38%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVE----NGAGTG*TVYPPLSSNIAHRGRSVDLAI 422
+AFPR+NNI F V NGAGTG TVY PLS++ G +VD+AI
Sbjct: 132 MAFPRMNNISFWLLIPAFALLLGSTFVPGGTGNGAGTGWTVYAPLSTS-GSAGPAVDMAI 190
Query: 423 FFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 602
+ + ++PLFV +V +TAF A AIT
Sbjct: 191 LSLHIAGASSILGAINFITTILNMRAPGMTLHKMPLFVWSVLVTAFLLLLALPVLAAAIT 250
Query: 603 ILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
+LLTDRN T+ +D AGGGDP LY HLF F+
Sbjct: 251 MLLTDRNFGTTFYDAAGGGDPELYQHLFWFF 281
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 88.6 bits (210), Expect = 1e-16
Identities = 55/131 (41%), Positives = 64/131 (48%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IF
Sbjct: 81 MAFPRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLH 140
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ S Q PLFV AV ITA A IT+LLT
Sbjct: 141 LAGISSILGAINFITTIMNMKPPAISQYQTPLFVWAVLITAVLLLLSLPVLAAGITMLLT 200
Query: 615 DRNLNTSIFDP 647
DRNLNT+ FDP
Sbjct: 201 DRNLNTTFFDP 211
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/80 (42%), Positives = 40/80 (50%)
Frame = +1
Query: 16 HKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXX 195
HKDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVM 60
Query: 196 XXXXXXXXN*LVPLILGAPE 255
N L+PL++GAP+
Sbjct: 61 PIMIGGFGNWLIPLMIGAPD 80
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 81.0 bits (191), Expect = 3e-14
Identities = 57/151 (37%), Positives = 69/151 (45%), Gaps = 4/151 (2%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAI 422
+AFPR+NNI F I+E G GTG T+ YPPLS +H G SVDLAI
Sbjct: 121 MAFPRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAI 180
Query: 423 FFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 602
F S +L LF A + IT
Sbjct: 181 FALHLSGVSSLLGSINFITTVANMRTPGIKLHKLALFGWATWSSRSRYFL-------GIT 233
Query: 603 ILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
++LTDRN NTS F+ AGGGDPIL+ HLF F+
Sbjct: 234 MVLTDRNFNTSFFEVAGGGDPILFQHLFWFF 264
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/85 (32%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = +1
Query: 4 HETNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXX 180
+ TN KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 36 NSTNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMI 95
Query: 181 XXXXXXXXXXXXXN*LVPLILGAPE 255
N L+PL++G P+
Sbjct: 96 FFMVMPALIGGFGNFLMPLMIGGPD 120
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 74.5 bits (175), Expect = 2e-12
Identities = 46/147 (31%), Positives = 61/147 (41%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+ FPR+NN+ F + E G G G T+YP L H + D +F
Sbjct: 95 MVFPRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVH 154
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
K SF LF+ A ITA AG +T++L
Sbjct: 155 LLGISSILNSINLLGTLFCCRRKFFSFLSWSLFIWAALITAILLIITLPVLAGGVTLILC 214
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NTS +D GGGD IL+ H+F F+
Sbjct: 215 DRNFNTSFYDVVGGGDLILFQHIFWFF 241
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 67.3 bits (157), Expect = 3e-10
Identities = 33/62 (53%), Positives = 39/62 (62%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+ T
Sbjct: 8 MAFPRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYSTV 67
Query: 435 FS 440
+
Sbjct: 68 IN 69
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +2
Query: 533 CMSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIHF*SCWRRRPNFISPFI 685
CM C +Y TCFS S+Y IIN K KY F W P +S FI
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFI 147
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 66.9 bits (156), Expect = 5e-10
Identities = 46/151 (30%), Positives = 65/151 (43%), Gaps = 1/151 (0%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAI 422
S +A+PRIN+I E G GTG T+YPPLS+++ +VD+ I
Sbjct: 94 SPELAYPRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVII 153
Query: 423 FFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 602
F S K + L + ++ IT+ G +
Sbjct: 154 FGLLVSGVASIMSSLNFITTVMHLRAKGLTLGILSVSTWSLIITSGMLLLTLPVLTGGVL 213
Query: 603 ILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
+LL+D + NT FDP GDPILY HLF F+
Sbjct: 214 MLLSDLHFNTLFFDPTFAGDPILYQHLFWFF 244
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 66.5 bits (155), Expect = 6e-10
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 1/148 (0%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
++ PR+NN+ + G G G T+YPPLS++ G +DLA+F
Sbjct: 94 LSMPRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLH 153
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQL-PLFV*AVGITAFXXXXXXXXXAGAITILL 611
+ + F L P+ + + T+ A +T+LL
Sbjct: 154 MAGMSSIAGSINFLVTIFNMRMGALFFMSLNPMLIWTLFGTSILLVTSVPVLAAGLTLLL 213
Query: 612 TDRNLNTSIFDPAGGGDPILYHHLFDFW 695
DR+ +TS + P GGGDPIL+ HLF F+
Sbjct: 214 LDRHFSTSFYYPEGGGDPILWQHLFWFF 241
Score = 35.5 bits (78), Expect = 1.3
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = +1
Query: 13 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 192
NHKDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 13 NHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFV 72
Query: 193 XXXXXXXXXN*LVPLIL 243
N +PL++
Sbjct: 73 MPTSIGGLGNWFIPLMI 89
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 64.5 bits (150), Expect = 2e-09
Identities = 43/147 (29%), Positives = 60/147 (40%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+N + F + G G+ T YPPLS S+D I
Sbjct: 103 MAFPRVNALSFWFTFVALLMVYQSFFIGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLH 161
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ DQ+ +FV +T+F AG++ LL
Sbjct: 162 TVGIGSLLGAINFMVTTQNMRSTAVTLDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLL 221
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DRN NTS +D GG+P+LY HLF F+
Sbjct: 222 DRNFNTSFYDTKKGGNPLLYQHLFWFF 248
Score = 43.2 bits (97), Expect = 0.006
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Frame = +1
Query: 13 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXX 186
NHK IGT Y EL +PG G Q+YN+++T H
Sbjct: 20 NHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFF 79
Query: 187 XXXXXXXXXXXN*LVPLILGAPE 255
N ++PL+LGAPE
Sbjct: 80 LVMPILIGGFGNWMLPLMLGAPE 102
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 63.3 bits (147), Expect = 6e-09
Identities = 42/113 (37%), Positives = 49/113 (43%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+NNI F VE GAGTG TVYPPLS +H G SVDLAIF
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLH 151
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAG 593
S + +LPLFV A+ +TA AG
Sbjct: 152 LSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAG 204
Score = 51.2 bits (117), Expect = 2e-05
Identities = 46/152 (30%), Positives = 56/152 (36%), Gaps = 2/152 (1%)
Frame = +1
Query: 4 HETNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 177
+ TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 178 XXXXXXXXXXXXXXN*LVPLILGAPE*HSHE*II*DFDSYPPPLYY*FQEEL*KMVQEQD 357
N LVP+++GAP+ F PP L +
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTG 125
Query: 358 EQFTPHFHLISHIEEDP*ILLFFSLHLAGISS 453
P + L FSLHL+GISS
Sbjct: 126 WTVYPPLSGLQSHSGGSVDLAIFSLHLSGISS 157
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 62.5 bits (145), Expect = 1e-08
Identities = 37/82 (45%), Positives = 42/82 (51%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXX 189
TNHKD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 11 TNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXM 70
Query: 190 XXXXXXXXXXN*LVPLILGAPE 255
N LVPL++GAP+
Sbjct: 71 XMPIMIGGFGNWLVPLMIGAPD 92
Score = 41.1 bits (92), Expect = 0.026
Identities = 20/42 (47%), Positives = 24/42 (57%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 380
+AFPR+NN+ F VE GAGTG TVYPPL+
Sbjct: 93 MAFPRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 60.9 bits (141), Expect = 3e-08
Identities = 42/147 (28%), Positives = 60/147 (40%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
IAFPR+N + V+ G G Y PLS G+ D+ T
Sbjct: 108 IAFPRLNAFSYWMYLAGGLLLWIAFAVDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMIT 167
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
F+ S D++PLFV ++ +T+F A T L+
Sbjct: 168 FTEVSALAIAVEIVVTVFKQRAPGMSLDRIPLFVWSMLVTSFLVILAMPAIMIASTSLIL 227
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DR + T F+PA GGD +L+ HLF F+
Sbjct: 228 DRLVGTHFFNPAEGGDVLLWQHLFWFF 254
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 60.5 bits (140), Expect = 4e-08
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Frame = +1
Query: 100 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPE*HSHE*II 279
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAP+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 280 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*I-LLFFSLHLAGISS 453
F +P +Y + K +DE TP +L++ I P + L F LHLAG+SS
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTP-LYLVT-ISAGPSVDLAIFPLHLAGVSS 139
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/147 (23%), Positives = 61/147 (41%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+ +PR+N +E G+GTG T+YPPLS+++++ G +D IF
Sbjct: 100 VVYPRVNLYSLLFQPIGFVLVVSSIYLEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLL 157
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ D++ ++ +T+F ++
Sbjct: 158 AAGIASTLSSVNFITTFTSVKTIGFVIDRISPAAWSIVLTSFLLLLSLPVVTAVFLMVFL 217
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DR+ NT F+ + GDP+LY HLF F+
Sbjct: 218 DRHYNTMFFESSNSGDPVLYQHLFWFF 244
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 54.4 bits (125), Expect = 3e-06
Identities = 41/118 (34%), Positives = 52/118 (44%)
Frame = +3
Query: 342 GAGTG*TVYPPLSSNIAHRGRSVDLAIFFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQ 521
G G G T+YPPLS G VD + FS SF+
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVD----YLMFSLHLAGVSSLIGSVNFISTIFSRLSFN- 270
Query: 522 LPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
+ V A T+ A IT+LL DRN T+ F+P+GGGDPIL+ HLF F+
Sbjct: 271 CSIIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFF 328
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 53.6 bits (123), Expect = 5e-06
Identities = 38/148 (25%), Positives = 61/148 (41%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFP++N + F +V+ GA TG T Y P S+ + V L F
Sbjct: 115 VAFPKLNLLSFYVYLAGAVVALFG-MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFILG 173
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
FS + + +LPLFV ++ T+ ++ ++
Sbjct: 174 FSSILTGLNFIVTTHTMRAPGM---GWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAV 230
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFWT 698
+ IFDPA GGDP+L+ H F F++
Sbjct: 231 EHAFGWGIFDPARGGDPVLFQHFFWFYS 258
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 52.0 bits (119), Expect = 1e-05
Identities = 42/148 (28%), Positives = 56/148 (37%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+N + F V G T YPPLS G +L I
Sbjct: 106 MAFPRLNAVAFWLTPPGGILLISSFFV-GAPQAGWTSYPPLSLLSGKWGE--ELWILSLL 162
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
IK +PLF A+ T+ A A+ +L
Sbjct: 163 LVGTSSILGAINFVTTILKMRIKDMDLHSMPLFCWAMLATSSLILLSTPVLASALILLSF 222
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFWT 698
D TS F+P GGGDP++Y HLF F++
Sbjct: 223 DLIAGTSFFNPVGGGDPVVYQHLFWFYS 250
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/84 (33%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXX 183
TNHKDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIF 71
Query: 184 XXXXXXXXXXXXN*LVPLILGAPE 255
N VP+++G+P+
Sbjct: 72 FMVMPAMIGGFGNWFVPILIGSPD 95
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 51.2 bits (117), Expect = 2e-05
Identities = 32/83 (38%), Positives = 41/83 (49%)
Frame = +3
Query: 372 PLSSNIAHRGRSVDLAIFFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGI 551
PL+S+IAH G SVD+AIF + K + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 552 TAFXXXXXXXXXAGAITILLTDR 620
T AGAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 50.8 bits (116), Expect = 3e-05
Identities = 31/86 (36%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Frame = +1
Query: 4 HETNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXX 177
+ TN KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 6 YSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVM 65
Query: 178 XXXXXXXXXXXXXXN*LVPLILGAPE 255
N LVP+++GAP+
Sbjct: 66 IFFMVMPAMVGGFGNYLVPVMIGAPD 91
Score = 34.7 bits (76), Expect = 2.2
Identities = 20/45 (44%), Positives = 22/45 (48%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNI 389
+AFPR+NNI F VE GAGTG TV LS I
Sbjct: 92 MAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVKCKLSQII 136
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 50.4 bits (115), Expect = 4e-05
Identities = 45/153 (29%), Positives = 59/153 (38%), Gaps = 9/153 (5%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLSSNIAHRGRSVDL---AI 422
+AFPR+N F G AG G T Y PLS+N+ G L AI
Sbjct: 124 MAFPRLNMYSFWTFLLSQLLVLASFFAPLGSAGAGWTTYTPLSTNVGMPGMGQTLVVAAI 183
Query: 423 FFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 602
F T S + ++ +LPL + + +TA A
Sbjct: 184 FVTGVSSTMGAVNYITTVIRLRAPGM---TYMRLPLTIWGLWLTAILNALFVPVLGSAAL 240
Query: 603 ILLTDRNLNTSIFDPA-----GGGDPILYHHLF 686
+LL DR+ T F GGGDPIL+ HLF
Sbjct: 241 LLLLDRSFGTEFFVAGASAVRGGGDPILWQHLF 273
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 50.0 bits (114), Expect = 6e-05
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 1/149 (0%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+N + ++ G TG T Y P S++ V F
Sbjct: 122 VAFPRLNLLSLYIYLAGAVLALWG-MLNGGLDTGWTFYTPYSAHTTTTVAPVLFGAFIIG 180
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
FS I ++ ++PLFV A+ T+ G + +L+T
Sbjct: 181 FSSIVTGINFIVTCHTMRAPGI---TWFKMPLFVWAIYATS-CIQVLATPVIGLLLVLVT 236
Query: 615 DRNL-NTSIFDPAGGGDPILYHHLFDFWT 698
NL +FDPA GGDP+L+ HLF F++
Sbjct: 237 VENLFGFGMFDPARGGDPVLFQHLFWFYS 265
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 49.2 bits (112), Expect = 1e-04
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 2/152 (1%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHR-GRSVDLA 419
++ ++ PR+N I F ++ +G T+YPPLS+ A G ++DL+
Sbjct: 99 TSELSMPRMNGISFWMLIVGVVIFVISNVLMSKPISSGWTLYPPLSTRDADNIGVNIDLS 158
Query: 420 IFFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAI 599
+ +F + ++ ++ +T+ AI
Sbjct: 159 LLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNINIYNFSIIVTSILLIGSLPILGVAI 218
Query: 600 TILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
T LL DRN+N++I+D GDP+LY HLF F+
Sbjct: 219 TGLLLDRNINSTIYDVI--GDPVLYQHLFWFF 248
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 48.8 bits (111), Expect = 1e-04
Identities = 42/146 (28%), Positives = 53/146 (36%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+A PR+ N+ F + G G VYPP SS +AH +VDL IF
Sbjct: 82 MAXPRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLH 141
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ K ++ LF A AIT+L
Sbjct: 142 LAGISSXLGSMNFLVTLGNMKXKGLNYGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXX 201
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDF 692
R N S F P G P + F F
Sbjct: 202 XRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 48.0 bits (109), Expect = 2e-04
Identities = 39/147 (26%), Positives = 61/147 (41%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+ FPR+N + F ++ + A G T YPPLSS SV+ ++F
Sbjct: 87 LLFPRMNALSFWLMPFSLSL-----LLFSMASAGWTFYPPLSS----LSPSVEFSVFSLH 137
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ + L LF ++ + + A IT++LT
Sbjct: 138 LAGIASLISSCNFLVTMLATRTS--LWYSLSLFCWSIVLVSLLLVLSLPVLAVGITLILT 195
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
D++L T +D GGDP+LY HLF F+
Sbjct: 196 DKHLGTCFYDATMGGDPLLYQHLFWFF 222
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 47.6 bits (108), Expect = 3e-04
Identities = 18/37 (48%), Positives = 29/37 (78%)
Frame = +3
Query: 588 AGAITILLTDRNLNTSIFDPAGGGDPILYHHLFDFWT 698
AGA+T+L D+ L T+ F+PA GGDP++Y ++F F++
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYS 195
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 46.0 bits (104), Expect = 0.001
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 5/152 (3%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGA-GTG*TVYPPLSSNIAHRGRSVDLA---I 422
+AFPR+N + + E+GA G T+Y PL++ I G +DLA I
Sbjct: 100 LAFPRLNALSYWLYLLSGLVLLASFFTESGAPNVGWTLYAPLTARIYTPGIGLDLAALAI 159
Query: 423 FFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 602
F + S I + ++P+F ++ T
Sbjct: 160 FLFSLSVTLGTINFLVTIAAMRAPGI---GWFKMPMFTWSILFTVILMLWAFPPLMVGGA 216
Query: 603 ILLTDRNLNTSIF-DPAGGGDPILYHHLFDFW 695
+LL DRNL T F +PAGG +L+ HLF F+
Sbjct: 217 LLLLDRNLGTEFFLNPAGGA--LLWDHLFWFF 246
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 45.6 bits (103), Expect = 0.001
Identities = 37/151 (24%), Positives = 53/151 (35%), Gaps = 3/151 (1%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENG-AGTG*TVYPPLS--SNIAHRGRSVDLAIF 425
+AFP++N F G A +G YPP+S + + H L I
Sbjct: 115 MAFPKLNAAAFWLVPVFSIVLMGSFFAPGGPASSGWWSYPPMSLQNPLGHFINGEFLWIL 174
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
S F ++P+FV G +
Sbjct: 175 AVALSGISSIMGAINFVTTIIRMRAPGMGFFRMPVFVWTAWAAQTIQLIGLPALTGGAVM 234
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLFDFWT 698
LL D + TS F P GGGDP+L+ H F F++
Sbjct: 235 LLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 45.2 bits (102), Expect = 0.002
Identities = 35/144 (24%), Positives = 51/144 (35%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFPR+N+ F + + G Y PLSS + VD I
Sbjct: 111 VAFPRLNSFGFWMFFFGAALLHFSFLTGSAPNAGWFSYVPLSSKAYSSLQGVDYWIIGLL 170
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S ++PLFV + + A A+ +LL
Sbjct: 171 IMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMMLMQAILIILALPALNSALAMLLI 230
Query: 615 DRNLNTSIFDPAGGGDPILYHHLF 686
DR L ++ FDP GG +L+ H F
Sbjct: 231 DRWLGSAFFDPTRGGSAVLWQHYF 254
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/35 (57%), Positives = 22/35 (62%)
Frame = +2
Query: 536 MSCRDYSXXXXXXTTCFSWSYYNIINRSKLKYIHF 640
M C +YS +TC WSYYN IN SKLKYI F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = +3
Query: 330 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
+VE G G G TVYPPL+S + H G SVD AIF
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIF 43
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 42.7 bits (96), Expect = 0.008
Identities = 35/147 (23%), Positives = 52/147 (35%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+ FPR+N + ++ G YPPL+ G +D T
Sbjct: 115 MTFPRLNAFGYYIYLIAGVMMYAALLLRIAPDAGWFSYPPLAGASFSPGLGLDFYTTVVT 174
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
F + S +++P+FV AV + +F A +L
Sbjct: 175 FMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAVLVMSFMIVFALPPLVIASLMLAL 234
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DR F A GDPIL+ HLF F+
Sbjct: 235 DRMAGMHFFT-AASGDPILWQHLFWFF 260
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 42.7 bits (96), Expect = 0.008
Identities = 24/61 (39%), Positives = 32/61 (52%)
Frame = +3
Query: 510 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFD 689
S Q+PL + ++ A A+ +LLTDR + F+PA GGDPI Y HLF
Sbjct: 179 SLGQVPLLAWSYLSSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFW 238
Query: 690 F 692
F
Sbjct: 239 F 239
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 41.1 bits (92), Expect = 0.026
Identities = 22/56 (39%), Positives = 30/56 (53%)
Frame = +3
Query: 516 DQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHL 683
DQ+ LF ++ IT AG IT+LL+DRN N F GG PIL+ ++
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYM 67
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 40.3 bits (90), Expect = 0.045
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +3
Query: 621 NLNTSIFDPAGGGDPILYHHLFDFW 695
N T+ FDPAGGGD IL+ HLF F+
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFF 215
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 39.5 bits (88), Expect = 0.079
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +3
Query: 510 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLF 686
S D+LP+ V + + A +L DRN T FD A GG P+L+ HLF
Sbjct: 213 SIDRLPIIVWGTLTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLF 271
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 39.5 bits (88), Expect = 0.079
Identities = 33/126 (26%), Positives = 41/126 (32%)
Frame = +2
Query: 254 NSIPTNK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFHY 433
+ P NK +KIL TPL Y N C K C + +NSLP Y T R +F
Sbjct: 76 HGFPPNKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
Query: 434 I*QVFHXXXXXXXXXXXXXXXXXXXXXXXXXXXCMSCRDYSXXXXXXTTCFSWSYYNIIN 613
CM +YS + S+YNI
Sbjct: 136 SCSSVFNSSLNQLYYNNHQYARYSNNPWTNPSVCMKSNNYSCTSTSFSPSIGSSHYNITY 195
Query: 614 RSKLKY 631
K KY
Sbjct: 196 WPKPKY 201
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 39.1 bits (87), Expect = 0.10
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 510 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFD 689
+ +++PLFV + AF A LL DR+ T F P GGD +L+ HLF
Sbjct: 195 TLNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFW 254
Query: 690 FW 695
F+
Sbjct: 255 FF 256
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 38.7 bits (86), Expect = 0.14
Identities = 33/147 (22%), Positives = 50/147 (34%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S +AFPR+ F + +G +YPPLSS + G + D +
Sbjct: 105 SRDLAFPRLTAYGFWCYVFGGSMMIFSLLWGIAPDSGWFMYPPLSSTLGAPGINSDFWLI 164
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
TF S ++P+F +TA +
Sbjct: 165 GITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPIFAWYALVTAVMILTGFPPLILGSIL 224
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLF 686
L +R + F A GGD +L+ HLF
Sbjct: 225 LELERAFDMPFFQAAAGGDALLWQHLF 251
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 38.7 bits (86), Expect = 0.14
Identities = 31/147 (21%), Positives = 49/147 (33%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+AFP +NN+ F ++ G T Y PL+SN G + +
Sbjct: 132 VAFPYLNNLSFWTFFVGAMLFNISFVIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQ 191
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ K + ++P+F IT A+ +L
Sbjct: 192 IAGIGTLMTGINFMVTILKMRTKGMTLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSF 251
Query: 615 DRNLNTSIFDPAGGGDPILYHHLFDFW 695
DR F GG P+L+ +LF W
Sbjct: 252 DRLFGAHFFTLEAGGMPMLWANLFWIW 278
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 38.3 bits (85), Expect = 0.18
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +3
Query: 513 FDQLPLFV*AVGITAFXXXXXXXXXAG-AITILLTDRNLNTSIFDPAGGGDPILYHHLFD 689
+++L +FV A + AF G A+T+L D+ + T FD A GGD + Y +LF
Sbjct: 178 WNKLNIFVWAT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFW 236
Query: 690 FWT 698
F++
Sbjct: 237 FYS 239
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 38.3 bits (85), Expect = 0.18
Identities = 17/60 (28%), Positives = 32/60 (53%)
Frame = +3
Query: 519 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFDFWT 698
++P++V +V + A ++L +R + S F+PA GGDP+L+ F F++
Sbjct: 190 KMPIYVWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYS 249
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 37.9 bits (84), Expect = 0.24
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = +3
Query: 594 AITILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
A+ +LL DRN T+ F A GGDPI + HLF F+
Sbjct: 260 ALIMLLLDRNFGTTFFTVA-GGDPIFWQHLFWFF 292
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 36.7 bits (81), Expect = 0.55
Identities = 40/163 (24%), Positives = 61/163 (37%), Gaps = 15/163 (9%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVE-NGAGTG*TVYPPLS---SNIAHRGRSVDLAI 422
+AFP +N + + + +GA G T YPPLS ++ G + L +
Sbjct: 126 MAFPTLNMLSYWFMWPAFFFFGGAFFCDGHGAAAGWTSYPPLSDMTTSAPSSGAAQTLWL 185
Query: 423 FFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAIT 602
T + +LPL + A+ ITA A
Sbjct: 186 LGVTTVGVSSMLGSVNYMTTIIQMRAPGMTMFRLPLTIWAMFITALLQAFALPVLTAAGF 245
Query: 603 ILLTDRNLNTSIFDP-----------AGGGDPILYHHLFDFWT 698
++L DR + T F P AGGG P+L+ HLF F++
Sbjct: 246 MMLADRLIGTGFFLPEGLVVNNSPMAAGGGQPLLWQHLFWFYS 288
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 36.7 bits (81), Expect = 0.55
Identities = 39/152 (25%), Positives = 56/152 (36%), Gaps = 7/152 (4%)
Frame = +3
Query: 261 FPRINNIRFXXXXXXXXXXXXXXIV-ENGAGTG*TVYPPLSSNIAHRGRS-VDLAIFFTT 434
+PRIN + F + ++G G T+YPPLS+ G + L I
Sbjct: 100 WPRINALSFWMQVPATVFMWSSLLFWQHGDSIGWTLYPPLSTISKSIGVDLILLGIIIAG 159
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
FS IK + LF +V + A +LL
Sbjct: 160 FSSTLTGINFILTITRLRRPDIK---MLDMSLFAWSVLAASMLMVTALPPLAAGAIMLLL 216
Query: 615 DRNLNTSIF-----DPAGGGDPILYHHLFDFW 695
+R+L F DPA GDP L+ H+F F+
Sbjct: 217 ERHLGMHFFTPVPGDPAASGDPRLFQHIFWFF 248
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 36.3 bits (80), Expect = 0.73
Identities = 31/147 (21%), Positives = 51/147 (34%)
Frame = +3
Query: 246 STRIAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIF 425
S +A+PR++ F + +G +YPPL+S + G + D +
Sbjct: 105 SRDLAYPRLSAYGFWCYVLGGSMLIVALLAGIAPDSGWFMYPPLASTLGSPGINSDFWLL 164
Query: 426 FTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITI 605
TF S D++P++ +TA +
Sbjct: 165 GITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPIYGWYALVTATMILTGFPPLILGSIL 224
Query: 606 LLTDRNLNTSIFDPAGGGDPILYHHLF 686
L +R F A GGD +L+ HLF
Sbjct: 225 LELERAFGLPFFQVAEGGDSLLWQHLF 251
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 36.3 bits (80), Expect = 0.73
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +3
Query: 594 AITILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
A+ ++ DR+ T+ F+ A GGDPIL HLF F+
Sbjct: 366 AVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFF 399
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 35.9 bits (79), Expect = 0.97
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Frame = +3
Query: 510 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDP----AG------GG 659
SF +LPL + A ITA A +L+ DR+L TS F AG GG
Sbjct: 229 SFTRLPLTIWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGG 288
Query: 660 DPILYHHLFDF 692
P+L+ HLF F
Sbjct: 289 SPVLFQHLFWF 299
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 35.9 bits (79), Expect = 0.97
Identities = 21/81 (25%), Positives = 33/81 (40%)
Frame = +1
Query: 13 NHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXX 192
+HKDIG LY EL +PG + + YN+++T+H
Sbjct: 93 DHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHG-ITMLFLF 151
Query: 193 XXXXXXXXXN*LVPLILGAPE 255
N L+PL++GA +
Sbjct: 152 ATPIIAAFSNYLIPLLIGADD 172
Score = 35.5 bits (78), Expect = 1.3
Identities = 48/155 (30%), Positives = 59/155 (38%), Gaps = 8/155 (5%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXX--IVEN-GAGTG*TVYPPLS-----SNIAHRGRSV 410
+AFPRIN I F I E A TG T+Y PLS N A+ G V
Sbjct: 173 MAFPRINAIAFWLLPPAALLIWAGFFPIPEVIPAQTGWTMYTPLSVGEGMGNQANAG--V 230
Query: 411 DLAIFFTTFSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXA 590
DL + S K S+ L +F + +
Sbjct: 231 DLMLLGLHLSGVSATMGSINFIATIFTERGKNVSWANLDIFSWTILTQSGLILFAFPLLG 290
Query: 591 GAITILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
AI +LL DRN TS F AG G IL+ HLF F+
Sbjct: 291 SAIMMLLFDRNFGTSFF--AGEGGAILWQHLFWFF 323
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 35.5 bits (78), Expect = 1.3
Identities = 30/144 (20%), Positives = 49/144 (34%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
+ FPR+ + + + G +Y PLS++ G S D + T
Sbjct: 134 LVFPRLGAFGYYCYLFGGIIVLSSFLFDAAPDGGWFMYVPLSTSAYTEGLSADFWLIGIT 193
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
+ S ++P+ + + TAF +L
Sbjct: 194 LAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWYLLATAFMIAIAFPPLIIGSILLEA 253
Query: 615 DRNLNTSIFDPAGGGDPILYHHLF 686
+R L FD GGDP+L+ HLF
Sbjct: 254 ERLLGLPFFDHTLGGDPLLWQHLF 277
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 35.1 bits (77), Expect = 1.7
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +3
Query: 510 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNT 632
+ D++ L ++ ITA AGAIT+LLTDRN+NT
Sbjct: 161 TMDKISLLSWSILITAVLLLLSLPVLAGAITMLLTDRNMNT 201
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 34.7 bits (76), Expect = 2.2
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +3
Query: 9 DKS*RYWNIIFYFWYLIRNNWNIFKTFNS 95
+KS YWNI+F+FWYLI ++ K NS
Sbjct: 343 NKSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 33.9 bits (74), Expect = 3.9
Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Frame = +1
Query: 10 TNHKDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYN 147
TNHKDIGTLY EL PG+ I G+ Q+YN
Sbjct: 12 TNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 33.9 bits (74), Expect = 3.9
Identities = 26/144 (18%), Positives = 50/144 (34%)
Frame = +3
Query: 255 IAFPRINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFFTT 434
++FP +N + F + G T Y LS + +G +D +
Sbjct: 103 VSFPFLNALGFWLFFFGHIFLNLSWFLGGAPDAGWTSYASLS--LHSKGHGIDFFVLGLQ 160
Query: 435 FSXXXXXXXXXXXXXXXXXXTIK**SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLT 614
S ++ +LPLF + + + +++
Sbjct: 161 ISGLGTLIAGINFLATIINMRAPGMTYMRLPLFTWTTFVASALILFAFPPLTVGLALMML 220
Query: 615 DRNLNTSIFDPAGGGDPILYHHLF 686
DR T+ F+P GG+ +++ HLF
Sbjct: 221 DRLFGTNFFNPELGGNTVIWEHLF 244
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 33.1 bits (72), Expect = 6.8
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +3
Query: 519 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFDFWT 698
++P+FV +T+ A+ +L+ DR + F+ GG + Y HL FWT
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHL--FWT 257
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 33.1 bits (72), Expect = 6.8
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 510 SFDQLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFD 689
S ++P+F A+ I A A +L +R+ F GGDP+L+ HLF
Sbjct: 203 SLTRMPIFAWAMLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFW 262
Query: 690 FW 695
F+
Sbjct: 263 FF 264
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 33.1 bits (72), Expect = 6.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 615 DRNLNTSIFDPAGGGDPILYHHLF 686
+R + FDP GGDP+L+ HLF
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLF 277
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 33.1 bits (72), Expect = 6.8
Identities = 18/59 (30%), Positives = 25/59 (42%)
Frame = +3
Query: 519 QLPLFV*AVGITAFXXXXXXXXXAGAITILLTDRNLNTSIFDPAGGGDPILYHHLFDFW 695
++PLFV TA + +R T FD A GG P+L+ LF F+
Sbjct: 178 KMPLFVWGFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFF 236
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 552,894,542
Number of Sequences: 1657284
Number of extensions: 9065005
Number of successful extensions: 20589
Number of sequences better than 10.0: 85
Number of HSP's better than 10.0 without gapping: 19281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20424
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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