Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20123
(581 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 141 4e-34
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 141 4e-34
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 141 4e-34
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 140 9e-34
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 140 9e-34
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 94 6e-20
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 94 6e-20
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 94 7e-20
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 83 1e-16
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 75 5e-14
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 57 8e-09
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 48 6e-06
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 46 2e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 2e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 36 0.016
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 36 0.028
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 36 0.028
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 36 0.028
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.037
Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical pr... 33 0.11
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 33 0.15
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 33 0.20
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical pr... 32 0.26
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 29 1.8
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.4
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.4
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 29 3.2
U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 7.4
U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical pr... 27 7.4
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 7.4
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 72 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 132 LSDYNIQKESTLHLV 146
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 208 LSDYNIQKESTLHLV 222
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 224 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 284 LSDYNIQKESTLHLV 298
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 300 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 360 LSDYNIQKESTLHLV 374
Score = 140 bits (338), Expect = 9e-34
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLV 232
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 138 bits (335), Expect = 2e-33
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 376 RLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 436 LSDYNIQKESTLHLV 450
Score = 94.7 bits (225), Expect = 4e-20
Identities = 47/52 (90%), Positives = 48/52 (92%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 163
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 452 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 72 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 132 LSDYNIQKESTLHLV 146
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 208 LSDYNIQKESTLHLV 222
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 224 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 284 LSDYNIQKESTLHLV 298
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 300 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 360 LSDYNIQKESTLHLV 374
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 452 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 512 LSDYNIQKESTLHLV 526
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 528 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 588 LSDYNIQKESTLHLV 602
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 604 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 664 LSDYNIQKESTLHLV 678
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 680 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 740 LSDYNIQKESTLHLV 754
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 756 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 816 LSDYNIQKESTLHLV 830
Score = 140 bits (338), Expect = 9e-34
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLV 232
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 138 bits (335), Expect = 2e-33
Identities = 69/75 (92%), Positives = 70/75 (93%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTL GKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 376 RLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 436 LSDYNIQKESTLHLV 450
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 72 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 131
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 132 LSDYNIQKESTLHLV 146
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 148 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 207
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 208 LSDYNIQKESTLHLV 222
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 224 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 283
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 284 LSDYNIQKESTLHLV 298
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 300 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 359
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 360 LSDYNIQKESTLHLV 374
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 376 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 435
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 436 LSDYNIQKESTLHLV 450
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 452 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 511
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 512 LSDYNIQKESTLHLV 526
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 528 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 587
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 588 LSDYNIQKESTLHLV 602
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 604 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 663
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 664 LSDYNIQKESTLHLV 678
Score = 141 bits (341), Expect = 4e-34
Identities = 70/75 (93%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 680 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 739
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQKESTLHLV
Sbjct: 740 LSDYNIQKESTLHLV 754
Score = 140 bits (338), Expect = 9e-34
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLV 232
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 140 bits (338), Expect = 9e-34
Identities = 69/75 (92%), Positives = 71/75 (94%)
Frame = +2
Query: 8 RRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 187
R R MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRT
Sbjct: 756 RLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 815
Query: 188 LSDYNIQKESTLHLV 232
LSDYNIQK+STLHLV
Sbjct: 816 LSDYNIQKQSTLHLV 830
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 140 bits (338), Expect = 9e-34
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLV 232
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 140 bits (338), Expect = 9e-34
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 203 IQKESTLHLV 232
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 94.3 bits (224), Expect = 6e-20
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 435
KRKKK Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA +R
Sbjct: 73 KRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANR 132
Query: 436 HYCGKCHSTMV 468
HYCG+CH T+V
Sbjct: 133 HYCGRCHDTLV 143
Score = 57.2 bits (132), Expect = 8e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 209 KESTLHL 229
E+T+++
Sbjct: 57 SEATIYV 63
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 94.3 bits (224), Expect = 6e-20
Identities = 41/71 (57%), Positives = 49/71 (69%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVFMAVMEDR 435
KRKKK Y+TP LAVL++YK+DENGKI RLR+EC CG GVFMA +R
Sbjct: 73 KRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVFMAQHANR 132
Query: 436 HYCGKCHSTMV 468
HYCG+CH T+V
Sbjct: 133 HYCGRCHDTLV 143
Score = 57.2 bits (132), Expect = 8e-09
Identities = 30/67 (44%), Positives = 46/67 (68%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 208
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGID 56
Query: 209 KESTLHL 229
E+T+++
Sbjct: 57 SEATIYV 63
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 93.9 bits (223), Expect = 7e-20
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
M I VKTLTGK I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY
Sbjct: 1 MLIKVKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYK 60
Query: 203 IQKESTLHLV 232
+ S LHLV
Sbjct: 61 VLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/71 (52%), Positives = 52/71 (73%)
Frame = +2
Query: 20 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 199
K+ + VKTL GKTI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L Y
Sbjct: 160 KLTVSVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAY 219
Query: 200 NIQKESTLHLV 232
NI+ E +HLV
Sbjct: 220 NIRDEDIIHLV 230
Score = 38.7 bits (86), Expect = 0.003
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +2
Query: 44 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
+TG IT VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 224 HL 229
L
Sbjct: 152 RL 153
Score = 33.9 bits (74), Expect = 0.085
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 130
M + VKT TGKTIT+E +NVK +++DK+G+
Sbjct: 59 MLLSVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 74.5 bits (175), Expect = 5e-14
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 133
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 1 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 57.2 bits (132), Expect = 8e-09
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = +2
Query: 20 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 199
+ QIFVK L G + ++ DT+ ++K I+ + IP + L F+GK+LED ++ DY
Sbjct: 153 EFQIFVKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDY 211
Query: 200 NIQKESTL 223
NIQK ST+
Sbjct: 212 NIQKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLS 193
++I+V+ G+T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL
Sbjct: 103 IRIYVEN-AGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLF 161
Query: 194 DYNIQKESTLHL 229
D + + STL L
Sbjct: 162 DNSFENGSTLRL 173
Score = 30.3 bits (65), Expect = 1.0
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 199
M + +KT TGK IT+E S VK +++DK+G+ G Q +E T+ D
Sbjct: 1 MLLSIKTSTGKNITVEAPKS-----VKTEVRDKQGVVFTVSYDKGTGNQIIEMEDTVQDV 55
Query: 200 NIQK 211
IQ+
Sbjct: 56 KIQE 59
Score = 27.9 bits (59), Expect = 5.6
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 20 KMQIFVKTLTGKTITLEV 73
++ +FVKT TGKTIT+ +
Sbjct: 180 EIDVFVKTYTGKTITISI 197
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/70 (40%), Positives = 36/70 (51%)
Frame = +2
Query: 20 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 199
K Q FV+ L GKT TL V SDT+E K ++ R+ + GK L D T +Y
Sbjct: 42 KFQYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEY 96
Query: 200 NIQKESTLHL 229
NI ST+ L
Sbjct: 97 NISNNSTMDL 106
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/61 (40%), Positives = 32/61 (52%)
Frame = +2
Query: 47 TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLH 226
+G L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 227 L 229
L
Sbjct: 241 L 241
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +2
Query: 29 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 166
+FVKTL +T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 2 VFVKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 65 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 229
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 65 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 36.3 bits (80), Expect = 0.016
Identities = 16/58 (27%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +2
Query: 53 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 223
K I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 32 KQIVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 35.5 bits (78), Expect = 0.028
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLED 178
+ + +TLT LE+ TI VKA + ++G P Q+LI+ GK L+D
Sbjct: 52 LSVTFRTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDD 105
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +2
Query: 44 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 224 HL 229
+L
Sbjct: 644 YL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/62 (22%), Positives = 35/62 (56%)
Frame = +2
Query: 44 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 224 HL 229
+L
Sbjct: 644 YL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.037
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +2
Query: 41 TLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 199
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>Z46933-1|CAA87034.1| 142|Caenorhabditis elegans Hypothetical
protein F34H10.1 protein.
Length = 142
Score = 33.5 bits (73), Expect = 0.11
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRL 372
KRKKK Y+ P +++K+DENGKI RL
Sbjct: 74 KRKKKVYTIPKKNNISQRKSSSPSPKYFKIDENGKISRL 112
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +2
Query: 44 LTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
L G I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 189 LHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 203 IQKESTLHLV 232
I T+HLV
Sbjct: 81 ISDGQTVHLV 90
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 32.7 bits (71), Expect = 0.20
Identities = 19/70 (27%), Positives = 36/70 (51%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 202
+++ +KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 21 IRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQAAG 80
Query: 203 IQKESTLHLV 232
I T+HLV
Sbjct: 81 ISDGQTVHLV 90
>Z81567-5|CAB04588.2| 154|Caenorhabditis elegans Hypothetical
protein K08C9.7 protein.
Length = 154
Score = 32.3 bits (70), Expect = 0.26
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 256 KRKKKNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRL 372
KRKKK Y P +++K+DENGKI RL
Sbjct: 86 KRKKKVYIIPKKNNISQRKSSSPSPKYFKIDENGKISRL 124
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.5 bits (63), Expect = 1.8
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQ-LEDGRTLSDY 199
M + +KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D
Sbjct: 1 MLLSIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDV 55
Query: 200 NIQK 211
IQ+
Sbjct: 56 KIQE 59
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 236 STPGGGWIPSGYCSPRGYVHLPAAFQQ 156
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 35 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 133
+ TL G+TI V P + I + K+ EG+P
Sbjct: 279 ISTLDGRTIFYRVLPGEVIAHADVKVIHNEGMP 311
>U28735-6|AAF99954.1| 1493|Caenorhabditis elegans Hypothetical protein
F48E3.3 protein.
Length = 1493
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/52 (21%), Positives = 29/52 (55%)
Frame = +2
Query: 23 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 178
+Q+ + + TGK++ + VE + +E D+EG+ + L+ + ++ ++
Sbjct: 1149 LQVVIDSFTGKSVRVRVEKREGMEERNLLSDDEEGVWSSLSNLVSSKEKTQE 1200
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 7.4
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 149 LIFAGKQLEDGRTLSDYNIQKESTLHL 229
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
>U40935-1|AAA81687.1| 1131|Caenorhabditis elegans Hypothetical protein
F31E3.4 protein.
Length = 1131
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 2 GTRRRVKMQIFVKTLTGKTITLEVEPS 82
GT+R + +Q VK + G+TI +E S
Sbjct: 1037 GTQRMLSLQFLVKEILGETIQMEAHDS 1063
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 7.4
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 53 KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRL 151
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,712,983
Number of Sequences: 27780
Number of extensions: 261481
Number of successful extensions: 755
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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