Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20122
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.38 
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   4.7  
AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic acetylch...    24   4.7  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    24   4.7  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          23   6.2  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 27.5 bits (58), Expect = 0.38
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 324 KLNGLCFELFVGFDGNGEWIQKESRGRQPL 235
           K+N  C+E  V F+  G W+++ ++  +PL
Sbjct: 627 KVNTTCYEQNVSFEYEGNWLKQINQEDRPL 656


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 14/50 (28%), Positives = 24/50 (48%)
 Frame = +1

Query: 463 WAKELTARLLSGHGSYRIQERHHLP*DISSKYQLHSKTAAPPFKTECITV 612
           +AKELT  L +   + ++ E  HL  D+S   Q   K  +  +   C+ +
Sbjct: 264 FAKELTDVLATERPAAKLTEYRHLWVDLSHMMQQLGKAYSNMYGIYCLVI 313


>AY705395-1|AAU12504.1|  569|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 2 protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 13/53 (24%), Positives = 25/53 (47%)
 Frame = -3

Query: 529 GGVLEFYSSRDHLTVGPLALSPTATYSPVLSPLSRHSQEEMGWMYYSPTFLVK 371
           GGV E Y   +H+ +  + L   A    V++ L++      G + ++P  + K
Sbjct: 105 GGVTELYVPSEHIWLPDIVLYNNADGEYVVTTLTKAILHYTGKVIWTPPAIFK 157


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydrogenase
            protein.
          Length = 1325

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 234  IAAVALDFPFGSTHRSRQIQQRVRNTT 314
            +AA AL  PF   H S     +V NT+
Sbjct: 1040 VAATALGIPFDRIHISETSTDKVPNTS 1066


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -3

Query: 493 LTVGPLALSPTATYSPVLSPLS 428
           ++VG   L P  TY+  LSP S
Sbjct: 48  VSVGEFTLGPGRTYASALSPSS 69


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,119
Number of Sequences: 2352
Number of extensions: 15008
Number of successful extensions: 70
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)