Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20122
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1437|AAM68658.1|  681|Drosophila melanogaster CG13164-P...    33   0.33 
AE013599-1436|AAF58537.2|  832|Drosophila melanogaster CG13164-P...    33   0.33 
AE014134-1750|AAF52845.2| 1489|Drosophila melanogaster CG31755-P...    30   3.1  
AE013599-3476|AAF46906.3|  271|Drosophila melanogaster CG30266-P...    30   3.1  
X17549-1|CAA35585.1|  512|Drosophila melanogaster singed protein.      28   9.4  
AY071759-1|AAL49381.1|  564|Drosophila melanogaster RH62992p pro...    28   9.4  
AE014298-1103|AAN09224.1|  512|Drosophila melanogaster CG32858-P...    28   9.4  
AE014298-1102|AAF46307.1|  512|Drosophila melanogaster CG32858-P...    28   9.4  
AE014298-1101|AAN09225.2|  564|Drosophila melanogaster CG32858-P...    28   9.4  

>AE013599-1437|AAM68658.1|  681|Drosophila melanogaster CG13164-PC,
           isoform C protein.
          Length = 681

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -2

Query: 374 QIYIYLNKNRTLLNPVRNSMGCVSNSLLDLTGTVSGSKRKVEGDSRYALFILHHNRRIRY 195
           Q+Y  +++  TL+N V N +        +L GT++  +R+V         +   N R+  
Sbjct: 588 QMYYQVSEKETLINQVNNKLSSKEEEFYNLYGTLTHKQREVRRQEHIIKLLKEQNSRVSL 647

Query: 194 L 192
           L
Sbjct: 648 L 648


>AE013599-1436|AAF58537.2|  832|Drosophila melanogaster CG13164-PA,
           isoform A protein.
          Length = 832

 Score = 33.1 bits (72), Expect = 0.33
 Identities = 15/61 (24%), Positives = 28/61 (45%)
 Frame = -2

Query: 374 QIYIYLNKNRTLLNPVRNSMGCVSNSLLDLTGTVSGSKRKVEGDSRYALFILHHNRRIRY 195
           Q+Y  +++  TL+N V N +        +L GT++  +R+V         +   N R+  
Sbjct: 588 QMYYQVSEKETLINQVNNKLSSKEEEFYNLYGTLTHKQREVRRQEHIIKLLKEQNSRVSL 647

Query: 194 L 192
           L
Sbjct: 648 L 648


>AE014134-1750|AAF52845.2| 1489|Drosophila melanogaster CG31755-PA
            protein.
          Length = 1489

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -3

Query: 151  YNSFIYVLIKRVEFGIPK*RKNILKK*NSVCFFQDNELL 35
            Y S+   L+ ++ FG+P+   N  K  N VCF Q  ELL
Sbjct: 965  YPSYPSTLVFKMSFGVPRKVHNPCKI-NDVCFVQHKELL 1002


>AE013599-3476|AAF46906.3|  271|Drosophila melanogaster CG30266-PA
           protein.
          Length = 271

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = +2

Query: 272 SPFPSNPTKSSKHNPLSFSPDSAKSC 349
           SP  +N  KSS H P++ +PDSA  C
Sbjct: 238 SPGTTNHIKSSTHPPITPAPDSAMPC 263


>X17549-1|CAA35585.1|  512|Drosophila melanogaster singed protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 336 ESGEKLNGLCFELFVGFDGNGEW-IQKESRG 247
           ES E+  G  F++ +  DG+G W ++ ESRG
Sbjct: 92  ESDERDAGSRFQISISEDGSGRWALKNESRG 122


>AY071759-1|AAL49381.1|  564|Drosophila melanogaster RH62992p
           protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 336 ESGEKLNGLCFELFVGFDGNGEW-IQKESRG 247
           ES E+  G  F++ +  DG+G W ++ ESRG
Sbjct: 144 ESDERDAGSRFQISISEDGSGRWALKNESRG 174


>AE014298-1103|AAN09224.1|  512|Drosophila melanogaster CG32858-PB,
           isoform B protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 336 ESGEKLNGLCFELFVGFDGNGEW-IQKESRG 247
           ES E+  G  F++ +  DG+G W ++ ESRG
Sbjct: 92  ESDERDAGSRFQISISEDGSGRWALKNESRG 122


>AE014298-1102|AAF46307.1|  512|Drosophila melanogaster CG32858-PA,
           isoform A protein.
          Length = 512

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 336 ESGEKLNGLCFELFVGFDGNGEW-IQKESRG 247
           ES E+  G  F++ +  DG+G W ++ ESRG
Sbjct: 92  ESDERDAGSRFQISISEDGSGRWALKNESRG 122


>AE014298-1101|AAN09225.2|  564|Drosophila melanogaster CG32858-PC,
           isoform C protein.
          Length = 564

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -1

Query: 336 ESGEKLNGLCFELFVGFDGNGEW-IQKESRG 247
           ES E+  G  F++ +  DG+G W ++ ESRG
Sbjct: 144 ESDERDAGSRFQISISEDGSGRWALKNESRG 174


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,620,154
Number of Sequences: 53049
Number of extensions: 596406
Number of successful extensions: 1345
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1279
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)