Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20121
         (680 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical pr...    28   7.1  
AF022972-2|AAC48242.1|  346|Caenorhabditis elegans Seven tm rece...    28   7.1  

>Z75552-4|CAA99942.1|  624|Caenorhabditis elegans Hypothetical
           protein W04D2.4 protein.
          Length = 624

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/44 (31%), Positives = 21/44 (47%)
 Frame = -3

Query: 543 CGVCGSRADRRSEWPSNTRRQQCAPVLVNEFQLPTRILFFKLRF 412
           CG+C S    R E+ S+ R +      V+  + P R  F + RF
Sbjct: 73  CGLCSSEFITRPEFHSHLRIEHDVLPDVHSMEFPDRATFERFRF 116


>AF022972-2|AAC48242.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 112 protein.
          Length = 346

 Score = 27.9 bits (59), Expect = 7.1
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = -2

Query: 376 IYLKQLMS-FEK*FQFSFTFICVFLRDFMTW 287
           IY+K L+  F   F  S TF+ VF   F TW
Sbjct: 197 IYIKNLLGCFVHYFVMSMTFVVVFYCGFSTW 227


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,619,421
Number of Sequences: 27780
Number of extensions: 281798
Number of successful extensions: 649
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)