Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20119
         (647 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.71 
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.6  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.0  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   5.0  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    22   5.0  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    22   5.0  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.0  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.71
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 149 CKLFIVIALYRLVTFSSE*RLW 214
           C+LF ++  Y    FS E +LW
Sbjct: 18  CRLFALVPYYNFEKFSLEHQLW 39


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -1

Query: 329 FFIRHIPFFIATSTILIIRPVIFAALQ*LCTF 234
           F  +H+P F A +   I R  I + L   CTF
Sbjct: 312 FVSQHLPKFSAANFFDIERSTILSVLGTACTF 343


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +1

Query: 214 DDKILGEKVHNYCRAAKMTGLMMRIVEVAMKKGICRIK 327
           DD    EK  NY +   + G+ +   ++   KG+C +K
Sbjct: 490 DDSESVEKKVNYVQEMNLGGVFIWATDLDDFKGVCGMK 527


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 342 RHFLFLYSAYSLLHRHFYY 286
           ++FLF+ S +S+    FYY
Sbjct: 235 QNFLFVLSTFSICITQFYY 253


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 512 EEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQE 613
           +E QDK +EE+ +   ++  +   Q  Q+ +  E
Sbjct: 332 KEVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLE 365


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 VSVNWCKLFIVIALYRLVTFSSE*RLWMTRF*E 232
           VSV  C LF V  L+ L+    E   + T+F E
Sbjct: 302 VSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSE 334


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 VSVNWCKLFIVIALYRLVTFSSE*RLWMTRF*E 232
           VSV  C LF V  L+ L+    E   + T+F E
Sbjct: 302 VSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSE 334


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 VSVNWCKLFIVIALYRLVTFSSE*RLWMTRF*E 232
           VSV  C LF V  L+ L+    E   + T+F E
Sbjct: 302 VSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSE 334


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 134 VSVNWCKLFIVIALYRLVTFSSE*RLWMTRF*E 232
           VSV  C LF V  L+ L+    E   + T+F E
Sbjct: 302 VSVWKCLLFFVSVLFILLVKEGEVAFFFTQFSE 334


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 303 HRHFYYPHHQTRHL 262
           H   + PHHQ +H+
Sbjct: 175 HPQHHQPHHQQQHM 188


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +2

Query: 512 EEAQDKKIEEIEDEFNELIDEEFLQQYQKQRLQE 613
           +E QDK +EE+ +   ++  +   Q  Q+ +  E
Sbjct: 332 KEVQDKIVEEMNEVLGDIKKKPTYQDLQEMKYLE 365


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -3

Query: 303 HRHFYYPHHQTRHL 262
           H   + PHHQ +H+
Sbjct: 177 HPQHHQPHHQQQHM 190


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +3

Query: 30  YRTVLKKNSMVYKGVLNT*LS*QKI 104
           +  VLK+ + +YKG+++   S +K+
Sbjct: 540 FLAVLKRRTEIYKGLIDRIKSREKL 564


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/41 (29%), Positives = 16/41 (39%)
 Frame = -1

Query: 356 DGRQLGIFYFFIRHIPFFIATSTILIIRPVIFAALQ*LCTF 234
           +  ++ I    I H P F A     + R  I   L  L TF
Sbjct: 470 EAEEVKILLDVINHFPHFTAARFFDLNRKTILGVLNALFTF 510


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,048
Number of Sequences: 336
Number of extensions: 2519
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)