Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20116
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   4.0  
AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein p...    23   7.0  
AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding pr...    23   9.2  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 409 QVPSGARGRGNLGDFVLVRGAEGSPG 486
           Q P G RGR  L  +  + G  G PG
Sbjct: 144 QGPKGDRGRDGLPGYPGIPGTNGVPG 169


>AB090816-1|BAC57907.1|  455|Anopheles gambiae gag-like protein
           protein.
          Length = 455

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 217 CLGTKSQNSVMAFRLSVCGC 158
           CL TK+   +   +L +CGC
Sbjct: 354 CLPTKAAKQLAGRKLRLCGC 373


>AY146720-1|AAO12080.1|  147|Anopheles gambiae odorant-binding
           protein AgamOBP15 protein.
          Length = 147

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -1

Query: 396 SCSIMKIASCTCSVGTSWELVERASTERRLW 304
           S ++  +A C  S G   +  ERA +  R W
Sbjct: 100 SIALKVLAKCNKSTGPIADACERAYSHHRCW 130


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 753,096
Number of Sequences: 2352
Number of extensions: 17406
Number of successful extensions: 55
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)