Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20116
(699 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY444798-1|AAS20945.1| 977|Homo sapiens vacuolar sorting protei... 30 6.9
AK223524-1|BAD97244.1| 371|Homo sapiens cell division cycle ass... 30 6.9
AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens ... 30 6.9
AF102177-1|AAF37319.1| 966|Homo sapiens tumor antigen SLP-8p pr... 30 6.9
X00663-1|CAA25282.1| 800|Homo sapiens protein ( Human mRNA frag... 30 9.1
X00588-1|CAA25240.1| 1210|Homo sapiens epidermal growth factor r... 30 9.1
U95089-1|AAB53063.1| 405|Homo sapiens truncated epidermal growt... 30 9.1
U48722-1|AAC50802.1| 405|Homo sapiens epidermal growth factor r... 30 9.1
U39487-1|AAB08399.1| 1333|Homo sapiens xanthine dehydrogenase/ox... 30 9.1
K03193-1|AAA52371.1| 657|Homo sapiens EGFR protein. 30 9.1
D11456-1|BAA02013.2| 1333|Homo sapiens xanthine dehydrogenase pr... 30 9.1
DQ089481-1|AAY68219.1| 1333|Homo sapiens xanthine dehydrogenase ... 30 9.1
BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated prot... 30 9.1
BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated prot... 30 9.1
AY698024-1|AAT97979.1| 405|Homo sapiens epidermal growth factor... 30 9.1
AY698023-1|AAT97978.1| 645|Homo sapiens epidermal growth factor... 30 9.1
AY588246-1|AAS83109.1| 1210|Homo sapiens epidermal growth factor... 30 9.1
AY550966-1|AAT52212.1| 1210|Homo sapiens cell growth inhibiting ... 30 9.1
AF288738-5|AAG35787.1| 405|Homo sapiens p60 epidermal growth fa... 30 9.1
AF288738-4|AAG35790.1| 628|Homo sapiens truncated epidermal gro... 30 9.1
AF288738-3|AAG35786.1| 705|Homo sapiens p110 epidermal growth f... 30 9.1
AF288738-2|AAG35788.1| 657|Homo sapiens A431-specific p115 epid... 30 9.1
AF288738-1|AAG35789.1| 1210|Homo sapiens p170 epidermal growth f... 30 9.1
AF125253-1|AAG43240.1| 705|Homo sapiens truncated epidermal gro... 30 9.1
AB209442-1|BAD92679.1| 1081|Homo sapiens epidermal growth factor... 30 9.1
AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated prot... 30 9.1
>AY444798-1|AAS20945.1| 977|Homo sapiens vacuolar sorting protein
54 long isoform protein.
Length = 977
Score = 30.3 bits (65), Expect = 6.9
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +3
Query: 129 ASQIVCQQSVQPQTLSLNAITEFCDLVPRQQFGEDGDDLVQAPSWFWPKHRWTPYKAMAK 308
+S + + V P + + D+ P++ G D L APS +HRWT Y +K
Sbjct: 15 SSDVFFKIEVDPSK-HIRPVPSLPDVCPKEPTG-DSHSLYVAPSLVTDQHRWTVYH--SK 70
Query: 309 VFAPSKLFRP 338
V P+ L P
Sbjct: 71 VNLPAALNDP 80
>AK223524-1|BAD97244.1| 371|Homo sapiens cell division cycle
associated protein 7 isoform 2 variant protein.
Length = 371
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 192 EFCDLVPRQQFGEDGDDLVQAPSWFWPKHR 281
+FC R ++GE+ D + P+W WP R
Sbjct: 295 QFCGPCLRNRYGEEVRDALLDPNWHWPPCR 324
>AK126796-1|BAC86698.1| 195|Homo sapiens protein ( Homo sapiens
cDNA FLJ44846 fis, clone BRACE3051144. ).
Length = 195
Score = 30.3 bits (65), Expect = 6.9
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3
Query: 175 LSVCGCTDCWQTICEAICSLYSMRVTL 95
+SVCGC W ++CE C + V+L
Sbjct: 46 VSVCGCLCLWVSLCECPCECLCLWVSL 72
>AF102177-1|AAF37319.1| 966|Homo sapiens tumor antigen SLP-8p
protein.
Length = 966
Score = 30.3 bits (65), Expect = 6.9
Identities = 21/70 (30%), Positives = 32/70 (45%)
Frame = +3
Query: 129 ASQIVCQQSVQPQTLSLNAITEFCDLVPRQQFGEDGDDLVQAPSWFWPKHRWTPYKAMAK 308
+S + + V P + + D+ P++ G D L APS +HRWT Y +K
Sbjct: 15 SSDVFFKIEVDPSK-HIRPVPSLPDVCPKEPTG-DSHSLYVAPSLVTDQHRWTVYH--SK 70
Query: 309 VFAPSKLFRP 338
V P+ L P
Sbjct: 71 VNLPAALNDP 80
>X00663-1|CAA25282.1| 800|Homo sapiens protein ( Human mRNA
fragment for epidermal growth factor (EGF) receptor. ).
Length = 800
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 39 QNHLGSCQKCDPSCPNGSCWGAGEEN 64
>X00588-1|CAA25240.1| 1210|Homo sapiens epidermal growth factor
receptor protein.
Length = 1210
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>U95089-1|AAB53063.1| 405|Homo sapiens truncated epidermal growth
factor receptor-like protein precursor protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>U48722-1|AAC50802.1| 405|Homo sapiens epidermal growth factor
receptor precursor protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>U39487-1|AAB08399.1| 1333|Homo sapiens xanthine
dehydrogenase/oxidase protein.
Length = 1333
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 259 DGACTKSSPSSPNCCLGTKSQNSV 188
DG C ++PNCC+ K +SV
Sbjct: 166 DGGCCGGDGNNPNCCMNQKKDHSV 189
>K03193-1|AAA52371.1| 657|Homo sapiens EGFR protein.
Length = 657
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>D11456-1|BAA02013.2| 1333|Homo sapiens xanthine dehydrogenase
protein.
Length = 1333
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 259 DGACTKSSPSSPNCCLGTKSQNSV 188
DG C ++PNCC+ K +SV
Sbjct: 166 DGGCCGGDGNNPNCCMNQKKDHSV 189
>DQ089481-1|AAY68219.1| 1333|Homo sapiens xanthine dehydrogenase
protein.
Length = 1333
Score = 29.9 bits (64), Expect = 9.1
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 259 DGACTKSSPSSPNCCLGTKSQNSV 188
DG C ++PNCC+ K +SV
Sbjct: 166 DGGCCGGDGNNPNCCMNQKKDHSV 189
>BC120950-1|AAI20951.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -3
Query: 277 CLGQNHDGACTKSSPSSPNCCLGTKSQNSVMAFRLSVCGCTDCWQTICEAIC 122
C AC P CCL T S++S + S C T C + C+ C
Sbjct: 79 CASSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSCQQSC 130
>BC120949-1|AAI20950.1| 271|Homo sapiens keratin associated protein
10-5 protein.
Length = 271
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -3
Query: 277 CLGQNHDGACTKSSPSSPNCCLGTKSQNSVMAFRLSVCGCTDCWQTICEAIC 122
C AC P CCL T S++S + S C T C + C+ C
Sbjct: 79 CASSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSCQQSC 130
>AY698024-1|AAT97979.1| 405|Homo sapiens epidermal growth factor
receptor short isoform protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AY698023-1|AAT97978.1| 645|Homo sapiens epidermal growth factor
receptor protein.
Length = 645
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AY588246-1|AAS83109.1| 1210|Homo sapiens epidermal growth factor
receptor (erythroblastic leukemia viral (v-erb-b) oncog
protein.
Length = 1210
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AY550966-1|AAT52212.1| 1210|Homo sapiens cell growth inhibiting
protein 40 protein.
Length = 1210
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AF288738-5|AAG35787.1| 405|Homo sapiens p60 epidermal growth
factor receptor protein.
Length = 405
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AF288738-4|AAG35790.1| 628|Homo sapiens truncated epidermal growth
factor receptor protein.
Length = 628
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AF288738-3|AAG35786.1| 705|Homo sapiens p110 epidermal growth
factor receptor protein.
Length = 705
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AF288738-2|AAG35788.1| 657|Homo sapiens A431-specific p115
epidermal growth factor receptor protein.
Length = 657
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AF288738-1|AAG35789.1| 1210|Homo sapiens p170 epidermal growth
factor receptor protein.
Length = 1210
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AF125253-1|AAG43240.1| 705|Homo sapiens truncated epidermal growth
factor receptor precursor protein.
Length = 705
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 181 QNHLGSCQKCDPSCPNGSCWGAGEEN 206
>AB209442-1|BAD92679.1| 1081|Homo sapiens epidermal growth factor
receptor isoform a variant protein.
Length = 1081
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = -3
Query: 268 QNHDGACTKSSPSSPN-CCLGTKSQN 194
QNH G+C K PS PN C G +N
Sbjct: 52 QNHLGSCQKCDPSCPNGSCWGAGEEN 77
>AB076352-1|BAD01539.1| 271|Homo sapiens keratin associated protein
protein.
Length = 271
Score = 29.9 bits (64), Expect = 9.1
Identities = 16/52 (30%), Positives = 21/52 (40%)
Frame = -3
Query: 277 CLGQNHDGACTKSSPSSPNCCLGTKSQNSVMAFRLSVCGCTDCWQTICEAIC 122
C AC P CCL T S++S + S C T C + C+ C
Sbjct: 79 CASSPCQQACCVPVCCKPVCCLPTCSKDSSSCCQQSSCQPTCCASSSCQQSC 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,562,336
Number of Sequences: 237096
Number of extensions: 2394727
Number of successful extensions: 6314
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 5778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6309
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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