Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20116
         (699 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060861-1|AAL28409.1|  441|Drosophila melanogaster GM03427p pro...    49   5e-06
AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA...    49   5e-06
BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p pro...    41   0.002
AE014296-2306|AAF49797.1|  266|Drosophila melanogaster CG8757-PA...    29   6.1  

>AY060861-1|AAL28409.1|  441|Drosophila melanogaster GM03427p
           protein.
          Length = 441

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/47 (44%), Positives = 33/47 (70%)
 Frame = +1

Query: 550 RLCILQGLSNEANCKTDEPLNSLCRCAIRALETLLPGEKLSPLLKEV 690
           RLC+LQG +N+     DEP+ +LC+CA  AL  +LP  K++P+L ++
Sbjct: 299 RLCVLQGNNND----DDEPMGTLCKCAHSALTDMLPATKITPILADI 341



 Score = 41.9 bits (94), Expect = 8e-04
 Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +2

Query: 332 STNSQLVPT---EQVHEAIFMMLQLINGLKCLQARGVEEISETLSSFVALRE 478
           STN+  VP        E  F+MLQL+NG+K LQA+ +EE   +LS+ V  ++
Sbjct: 239 STNANAVPAFDDVMTREVAFIMLQLVNGMKNLQAKAIEETPLSLSNVVLSKD 290



 Score = 37.5 bits (83), Expect = 0.017
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = +3

Query: 12  DFTV-QPKSSVKAGRRIFCPAVWNSNSPVNVTLMLYKEQMASQIVCQQSVQPQTLS--LN 182
           DFT+ +   +   G++ F  A+W+S SPV + L     Q+   +  + S     +S  LN
Sbjct: 73  DFTILEGTQAFVVGKKAFHAALWSS-SPVTLALSADCNQLGG-VAGELSQLSGGVSDVLN 130

Query: 183 AITEFCDLVPRQQ 221
            +TEFCDLVP  Q
Sbjct: 131 PVTEFCDLVPSYQ 143


>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
            protein.
          Length = 1784

 Score = 49.2 bits (112), Expect = 5e-06
 Identities = 21/47 (44%), Positives = 33/47 (70%)
 Frame = +1

Query: 550  RLCILQGLSNEANCKTDEPLNSLCRCAIRALETLLPGEKLSPLLKEV 690
            RLC+LQG +N+     DEP+ +LC+CA  AL  +LP  K++P+L ++
Sbjct: 1642 RLCVLQGNNND----DDEPMGTLCKCAHSALTDMLPATKITPILADI 1684



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +2

Query: 332  STNSQLVPT---EQVHEAIFMMLQLINGLKCLQARGVEEISETLSSFVALRE 478
            STN+  +P        E  F+MLQL+NG+K LQA+ +EE   +LS+ V  ++
Sbjct: 1582 STNANAMPAFDDVMTREVAFIMLQLVNGMKNLQAKAIEETPLSLSNVVLSKD 1633



 Score = 37.5 bits (83), Expect = 0.017
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = +3

Query: 12   DFTV-QPKSSVKAGRRIFCPAVWNSNSPVNVTLMLYKEQMASQIVCQQSVQPQTLS--LN 182
            DFT+ +   +   G++ F  A+W+S SPV + L     Q+   +  + S     +S  LN
Sbjct: 1416 DFTILEGTQAFVVGKKAFHAALWSS-SPVTLALSADCNQLGG-VAGELSQLSGGVSDVLN 1473

Query: 183  AITEFCDLVPRQQ 221
             +TEFCDLVP  Q
Sbjct: 1474 PVTEFCDLVPSYQ 1486


>BT011106-1|AAR82773.1| 1434|Drosophila melanogaster LP05394p protein.
          Length = 1434

 Score = 40.7 bits (91), Expect = 0.002
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
 Frame = +2

Query: 332  STNSQLVPT---EQVHEAIFMMLQLINGLKCLQARGVEEISETLSSFVALRE 478
            STN+  +P        E  F+MLQL+NG+K LQA+ +EE   +LS+ V  ++
Sbjct: 1368 STNANAMPAFDDVMTREVAFIMLQLVNGMKNLQAKAIEETPLSLSNVVLSKD 1419



 Score = 37.5 bits (83), Expect = 0.017
 Identities = 26/73 (35%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
 Frame = +3

Query: 12   DFTV-QPKSSVKAGRRIFCPAVWNSNSPVNVTLMLYKEQMASQIVCQQSVQPQTLS--LN 182
            DFT+ +   +   G++ F  A+W+S SPV + L     Q+   +  + S     +S  LN
Sbjct: 1202 DFTILEGTQAFVVGKKAFHAALWSS-SPVTLALSADCNQLGG-VAGELSQLSGGVSDVLN 1259

Query: 183  AITEFCDLVPRQQ 221
             +TEFCDLVP  Q
Sbjct: 1260 PVTEFCDLVPSYQ 1272


>AE014296-2306|AAF49797.1|  266|Drosophila melanogaster CG8757-PA
           protein.
          Length = 266

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 517 TSIIVRNVVISLGFPQRHERGQSLRDFLDPSRLKALEAVDQLQHHEDSFVHLFSW 353
           T  ++   +I +G  +RHER + LR  L   +   L A+      ED  +  F W
Sbjct: 37  TRALIGAGMIVVGLARRHERVEKLRSGLSLEQQSRLHAIKCDITQEDQVLKAFDW 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,418,220
Number of Sequences: 53049
Number of extensions: 743110
Number of successful extensions: 2495
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2485
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3067209849
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)