Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20116
(699 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 24 1.6
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 23 2.1
AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 23 2.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.9
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 21 8.5
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 21 8.5
AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein. 21 8.5
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 21 8.5
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 21 8.5
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.8 bits (49), Expect = 1.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = +2
Query: 323 EALSTNSQLVPTEQVHEAIFMMLQLINGLKCLQARGV 433
E L Q+V + +F+ +NGL+ L RG+
Sbjct: 372 EGLEMKGQMVHCPESDSILFVSSPFLNGLEGLTGRGL 408
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 23.4 bits (48), Expect = 2.1
Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 2/108 (1%)
Frame = +3
Query: 54 RIFCPAVWNSNSPVNVTLMLYK-EQMASQIVC-QQSVQPQTLSLNAITEFCDLVPRQQFG 227
RIF ++ + + + L++Y Q+ S +V +++++ Q +N + + Q
Sbjct: 209 RIFVATIFTFSYCIPMILIIYYYSQIVSHVVNHEKALREQAKKMNVDSLRSNANTSSQSA 268
Query: 228 EDGDDLVQAPSWFWPKHRWTPYKAMAKVFAPSKLFRPTPNSCQLNRCT 371
E F WTPY M+ + A TP + CT
Sbjct: 269 EIRIAKAAITICFLYVLSWTPYGVMSMIGAFGNKALLTPGVTMIPACT 316
>AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective
protein-1 protein.
Length = 128
Score = 23.4 bits (48), Expect = 2.1
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 280 LCLG-QNHDGACTKSSPSSPNCCLGTKSQ 197
LC G QN+ G C + S N C+G ++
Sbjct: 68 LCGGPQNYLGICAEGMQCSCNKCIGCSAE 96
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.9
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +1
Query: 274 STGGHLTKLWPKSSLRRSSFDQLPTRAN*TGARSYLHDAATDQRPQVPSGARGRGNL--- 444
S GGH+ + W S+ + PTR G + +T +PSG NL
Sbjct: 1318 SFGGHVVRPWRGSATLACNAVGDPTREWYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQ 1377
Query: 445 --GDFVL-VRGAEGS 480
GD+ V A+G+
Sbjct: 1378 DGGDYTCQVENAQGN 1392
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.9
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 6/75 (8%)
Frame = +1
Query: 274 STGGHLTKLWPKSSLRRSSFDQLPTRAN*TGARSYLHDAATDQRPQVPSGARGRGNL--- 444
S GGH+ + W S+ + PTR G + +T +PSG NL
Sbjct: 1314 SFGGHVVRPWRGSATLACNAVGDPTREWYKGQGEQIRTDSTRNIQILPSGELMLSNLQSQ 1373
Query: 445 --GDFVL-VRGAEGS 480
GD+ V A+G+
Sbjct: 1374 DGGDYTCQVENAQGN 1388
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 22.2 bits (45), Expect = 4.9
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +1
Query: 304 PKSSLRRSSFDQLPTRAN*TGARSYLHDAATDQRPQVPSGARGR 435
P+S ++ DQL + T D++ D+ + PS + GR
Sbjct: 1320 PESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSASGGR 1363
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 21.4 bits (43), Expect = 8.5
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = -3
Query: 289 GVHLCLGQNHDGACTKSSPSSPNCCLGTKSQNSVMAFRLSVCGCT 155
G+H G + + S+P+ +C G + ++++ R SV C+
Sbjct: 133 GLHGLHGLHGLHGLSSSAPTGSSCGPGAAAAAALLSKRRSVSECS 177
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 407 LKCLQARGVEEISETLSSFV 466
++CL+ R I ETL++F+
Sbjct: 270 IRCLRYRPARAIVETLANFM 289
>AY526235-1|AAS20468.1| 169|Apis mellifera esterase protein.
Length = 169
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 407 LKCLQARGVEEISETLSSFV 466
++CL+ R I ETL++F+
Sbjct: 141 IRCLRYRPARAIVETLANFM 160
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 108 MLYKEQMASQIVCQQSVQP 164
M+Y++Q SQ QQS QP
Sbjct: 202 MMYQQQQQSQAASQQS-QP 219
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 407 LKCLQARGVEEISETLSSFV 466
++CL+ R I ETL++F+
Sbjct: 270 IRCLRYRPARAIVETLANFM 289
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,667
Number of Sequences: 438
Number of extensions: 4189
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -