Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20115
         (805 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              30   0.029
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    25   1.1  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    24   1.4  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    23   4.4  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    22   7.7  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 29.9 bits (64), Expect = 0.029
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
 Frame = -2

Query: 711 LRQCAKKRYSSCAGGCKLYVTKLC*HAATVGRGLTHFRFRFT*CIQHWLQEYIL--ILHT 538
           +R+C ++    CA   K+Y      H A    G +  + R   C+ H ++   +   LH 
Sbjct: 107 MRKCPRRHRPVCASNGKIYANHCELHRAACHSGSSLTKSRLMRCLHHDIENAHIRRTLHM 166

Query: 537 SRTS 526
           +RTS
Sbjct: 167 NRTS 170


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 577 NALRESEPEVRQAAAYGCGVLAQFGDVQFAAACARAVPLFGAL 705
           N LR S P    A  Y C  L   G V F A CA      GA+
Sbjct: 394 NELRHSRPV--PAKKYDCVTLLFSGIVGFGAYCAAHTDSSGAM 434


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 17/43 (39%), Positives = 18/43 (41%)
 Frame = +1

Query: 577 NALRESEPEVRQAAAYGCGVLAQFGDVQFAAACARAVPLFGAL 705
           N LR S P    A  Y C  L   G V F A CA      GA+
Sbjct: 394 NELRHSRPV--PAKKYDCVTLLFSGIVGFGAYCAAHTDSSGAV 434


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 381 YMRSCLLTAIRSILISTRCCPILCSYLRLIGLILIASGPFVFL 509
           Y+R+C+  ++R I  +T    IL   + L G  L A G  V L
Sbjct: 380 YLRACITESLRLIPTTTCIARILDEPIELSGYRLTA-GTVVLL 421


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 592 IHVMHSTLAPGIYLDTS 542
           +H+ +STLA G+ + T+
Sbjct: 271 VHIQNSTLAGGVAIGTA 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,093
Number of Sequences: 438
Number of extensions: 4253
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25489170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)