Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20114
         (709 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    25   0.80 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    25   0.80 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    25   0.80 
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    25   0.80 
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    25   0.80 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    25   0.80 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    25   0.80 
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.8  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 648 FLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           +L   P  L F+Q  +    AW+W  WLL
Sbjct: 198 YLFFVPPPLMFLQDFLSHQHAWIWLVWLL 226


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 654 YFFLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           Y F    PV   F+   I    AW+W  WLL
Sbjct: 444 YLFFESPPVV--FLNDFISHQHAWIWLLWLL 472


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 654 YFFLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           Y F    PV   F+   I    AW+W  WLL
Sbjct: 444 YLFFESPPVV--FLNDFISHQHAWIWLLWLL 472


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 648 FLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           +L   P  L F+Q  +    AW+W  WLL
Sbjct: 431 YLFFVPPPLMFLQDFLSHQHAWIWLVWLL 459


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -2

Query: 648 FLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           +L   P  L F+Q  +    AW+W  WLL
Sbjct: 431 YLFFVPPPLMFLQDFLSHQHAWIWLVWLL 459


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 654 YFFLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           Y F    PV   F+   I    AW+W  WLL
Sbjct: 444 YLFFESPPVV--FLNDFISHQHAWIWLLWLL 472


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 654 YFFLSLNPVFLGFVQSSI*KLLAWVWQFWLL 562
           Y F    PV   F+   I    AW+W  WLL
Sbjct: 444 YLFFESPPVV--FLNDFISHQHAWIWLLWLL 472


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/30 (30%), Positives = 13/30 (43%)
 Frame = +1

Query: 166 QNTGTCPESSCACPETSCACPESSLCPESS 255
           +NTG C      C + SC   +S    + S
Sbjct: 99  KNTGRCAFDGICCSQDSCHADKSCASDDKS 128


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +1

Query: 181 CPESSCACPETSC 219
           CP+ S AC + +C
Sbjct: 117 CPDGSLACGDGNC 129


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,452
Number of Sequences: 336
Number of extensions: 1044
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)