Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20113
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XNX5 Cluster: Putative uncharacterized protein; n=1; ...    36   0.81 
UniRef50_Q8V3H3 Cluster: SPV123 putative EEV glycoprotein; n=1; ...    36   1.4  
UniRef50_Q3LVX6 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_Q7R7X8 Cluster: Putative uncharacterized protein PY0744...    35   2.5  
UniRef50_A5I105 Cluster: Putative membrane protein; n=4; Clostri...    34   4.3  
UniRef50_Q4XLE9 Cluster: Putative uncharacterized protein; n=1; ...    34   4.3  
UniRef50_Q95LJ8 Cluster: Putative uncharacterized protein; n=1; ...    33   5.7  
UniRef50_Q1J7Z8 Cluster: Putative uncharacterized protein; n=12;...    33   9.9  

>UniRef50_Q4XNX5 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 126

 Score = 36.3 bits (80), Expect = 0.81
 Identities = 22/60 (36%), Positives = 32/60 (53%)
 Frame = -3

Query: 274 IKVLKKKIEVSIRANTAGSVEDLPFYQLDYN*YFTKVKSFFLFIILYHTIPTIILFLYTI 95
           IK LKK+I         G VE+    Q+    YFTK++ F+LF I +  + T I F++ I
Sbjct: 29  IKSLKKEIIEKKNVEKKG-VENKSIEQISALKYFTKLEIFYLFFIPFAFVSTYIFFMWNI 87


>UniRef50_Q8V3H3 Cluster: SPV123 putative EEV glycoprotein; n=1;
           Swinepox virus|Rep: SPV123 putative EEV glycoprotein -
           Swinepox virus (SWPV)
          Length = 199

 Score = 35.5 bits (78), Expect = 1.4
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = -3

Query: 160 SFFLFIILYHTIPTIILFLYTISYIVIYKMHTLCMHQYTKNICIKIKMV 14
           S  +F+ +  T+ +IIL LY I +I     H  C    +KNICI++  +
Sbjct: 2   SSLIFVYIVMTLSSIILILY-ILFICKRDKHIFCKKNKSKNICIRLNSI 49


>UniRef50_Q3LVX6 Cluster: Putative uncharacterized protein; n=1;
           Bigelowiella natans|Rep: Putative uncharacterized
           protein - Bigelowiella natans (Pedinomonas minutissima)
           (Chlorarachnion sp.(strain CCMP 621))
          Length = 867

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -2

Query: 656 YIKNGVNNIIFLTKPEFKLKNKLHFNVNWRGL 561
           Y  N + NII L   +F+LK  LHFN N R L
Sbjct: 589 YYSNNLYNIIILNFGQFRLKRDLHFNTNNRDL 620


>UniRef50_Q7R7X8 Cluster: Putative uncharacterized protein PY07449;
            n=1; Plasmodium yoelii yoelii|Rep: Putative
            uncharacterized protein PY07449 - Plasmodium yoelii
            yoelii
          Length = 1111

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 29/90 (32%), Positives = 44/90 (48%)
 Frame = -3

Query: 283  LYNIKVLKKKIEVSIRANTAGSVEDLPFYQLDYN*YFTKVKSFFLFIILYHTIPTIILFL 104
            + NI + KKK  +S+  N   S   L  YQL  N +F   K+ F+  I    I +++ F+
Sbjct: 916  ILNIFIYKKK-NISLSNNIIVS-NILAKYQLYNNNFFLLDKTNFVNDIKDTNIHSLVGFI 973

Query: 103  YTISYIVIYKMHTLCMHQYTKNICIKIKMV 14
            Y+I  + I KMHT       K I  K+  +
Sbjct: 974  YSIGKLKIKKMHTHFYKLIIKEIVKKMDKI 1003


>UniRef50_A5I105 Cluster: Putative membrane protein; n=4;
           Clostridium botulinum|Rep: Putative membrane protein -
           Clostridium botulinum A str. ATCC 3502
          Length = 100

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
 Frame = -3

Query: 328 RLYIIGFLAGRFPYTLYNI--KVLKKKIEVSIRANTAGSVEDLPFYQLDYN*YFTKVKSF 155
           RL  I    G   + LY     ++KKKI++ +  +   + ++     L  N  F  +  F
Sbjct: 3   RLIYITVYGGMCLFMLYCAYSSIVKKKIKIYVGEHRKITYKEKLSKALGINYLFLSI-CF 61

Query: 154 FLFIILYHTIPTIILFLYTISYIVIYKMHTLCMHQYTKN 38
           F++ +L     T    ++T+++IV++    + +++YTKN
Sbjct: 62  FIYAVLLFLNKTPKYPIFTMAFIVLFMTPFILVNKYTKN 100


>UniRef50_Q4XLE9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 45

 Score = 33.9 bits (74), Expect = 4.3
 Identities = 17/37 (45%), Positives = 21/37 (56%)
 Frame = -3

Query: 163 KSFFLFIILYHTIPTIILFLYTISYIVIYKMHTLCMH 53
           KSF  F+I Y     + L  + I +IV YK H LCMH
Sbjct: 3   KSFHFFLICYILFRFLYLSYFIIIFIV-YKAHMLCMH 38


>UniRef50_Q95LJ8 Cluster: Putative uncharacterized protein; n=1;
           Macaca fascicularis|Rep: Putative uncharacterized
           protein - Macaca fascicularis (Crab eating macaque)
           (Cynomolgus monkey)
          Length = 101

 Score = 33.5 bits (73), Expect = 5.7
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = -3

Query: 445 SKSELYYPLTNPTL*IVTHYC 383
           SKS+L  PLTNPTL  V++YC
Sbjct: 68  SKSDLNVPLTNPTLLFVSYYC 88


>UniRef50_Q1J7Z8 Cluster: Putative uncharacterized protein; n=12;
           Streptococcus|Rep: Putative uncharacterized protein -
           Streptococcus pyogenes serotype M4 (strain MGAS10750)
          Length = 136

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 17/57 (29%), Positives = 29/57 (50%)
 Frame = -3

Query: 178 YFTKVKSFFLFIILYHTIPTIILFLYTISYIVIYKMHTLCMHQYTKNICIKIKMVLS 8
           ++  VK F+LFI     IPT+I F+  I  +      ++  + +   +C  I M+LS
Sbjct: 60  WYQVVKQFWLFIKCTILIPTLIAFIIIIGCLTSISEVSIYFYLHLTVVCYTIGMILS 116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 685,740,354
Number of Sequences: 1657284
Number of extensions: 13482923
Number of successful extensions: 26885
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 25948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26871
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)