Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20113
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY635179-1|AAT65818.1|  353|Homo sapiens G protein-coupled recep...    32   2.5  
AJ303165-1|CAC33085.1|  265|Homo sapiens putative transmembrane ...    32   2.5  
AB196529-1|BAD97440.1|  353|Homo sapiens G protein-coupled recep...    32   2.5  
AB083594-1|BAB89307.1|  388|Homo sapiens putative G-protein coup...    32   2.5  

>AY635179-1|AAT65818.1|  353|Homo sapiens G protein-coupled receptor
           139 protein.
          Length = 353

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 410 HPLNCNALLFWAQINRPVVLPHITLFLTFI-YYWLP 306
           HPL  + + + A+  + +V  +IT FLT I YYW P
Sbjct: 132 HPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWP 167


>AJ303165-1|CAC33085.1|  265|Homo sapiens putative transmembrane
           receptor protein.
          Length = 265

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 410 HPLNCNALLFWAQINRPVVLPHITLFLTFI-YYWLP 306
           HPL  + + + A+  + +V  +IT FLT I YYW P
Sbjct: 103 HPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWP 138


>AB196529-1|BAD97440.1|  353|Homo sapiens G protein-coupled receptor
           protein.
          Length = 353

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 410 HPLNCNALLFWAQINRPVVLPHITLFLTFI-YYWLP 306
           HPL  + + + A+  + +V  +IT FLT I YYW P
Sbjct: 132 HPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWP 167


>AB083594-1|BAB89307.1|  388|Homo sapiens putative G-protein coupled
           receptor protein.
          Length = 388

 Score = 31.9 bits (69), Expect = 2.5
 Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -2

Query: 410 HPLNCNALLFWAQINRPVVLPHITLFLTFI-YYWLP 306
           HPL  + + + A+  + +V  +IT FLT I YYW P
Sbjct: 167 HPLKYHTVSYPARTRKVIVSVYITCFLTSIPYYWWP 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,926,735
Number of Sequences: 237096
Number of extensions: 2055582
Number of successful extensions: 5946
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5946
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)