Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20112
         (751 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   2.0  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.6  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    23   2.6  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   6.0  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   6.0  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.0  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +2

Query: 566 CPDSLGTSVFVGCYCYHLLKNLP 634
           C     T VF  CYCY+ +   P
Sbjct: 542 CLIQFNTIVFAFCYCYYSISIRP 564



 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 542 F*FSSGILCPDSLGTSVFVGCYCYH 616
           F F   I C     T VF  CYCY+
Sbjct: 253 FGFPIIIGCLIQFNTIVFSFCYCYY 277


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 200 PVYILVKVTNSKINDMRPEDVVLI 129
           P+Y L    N  +N + PEDV L+
Sbjct: 68  PIYKLDVCGNGGVNLLNPEDVELV 91


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 200 PVYILVKVTNSKINDMRPEDVVLIFLNNVCSNDLGYLNLIH 78
           P+Y L     +  N + PED  L+  N          NL+H
Sbjct: 75  PIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLLH 115


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -3

Query: 200 PVYILVKVTNSKINDMRPEDVVLIFLNNVCSNDLGYLNLIH 78
           P+Y L     +  N + PED  L+  N          NL+H
Sbjct: 75  PIYKLNAAHLAAANILSPEDCELVLSNPTHMEKSAIYNLLH 115


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 221 LEIFGVCILCFFCICYANEKGEI 289
           +++  VC +C+  I  AN+ GE+
Sbjct: 571 IDVVYVCDVCYSTIEEANKAGEL 593


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 221 LEIFGVCILCFFCICYANEKGEI 289
           +++  VC +C+  I  AN+ GE+
Sbjct: 296 IDVVYVCDVCYSTIEEANKAGEL 318


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +1

Query: 532 IMSILVLFRNTLSRFSWYFGFCWLLLLPF 618
           I S+    +NT+  F+  FG  +LL++ +
Sbjct: 182 IESLACELKNTVDDFNDIFGISFLLIISY 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,624
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)