Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20110
(674 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatas... 175 4e-45
SPCC31H12.05c |sds21||serine/threonine protein phosphatase Sds21... 171 6e-44
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 149 3e-37
SPAC823.15 |ppa1||minor serine/threonine protein phosphatase Ppa... 110 2e-25
SPBC16H5.07c |ppa2||serine/threonine protein phosphatase Ppa2|Sc... 103 3e-23
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ... 101 9e-23
SPBC26H8.05c |||serine/threonine protein phosphatase |Schizosacc... 94 1e-20
SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatas... 94 2e-20
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 86 4e-18
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 81 2e-16
SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos... 26 4.3
SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces pom... 26 4.3
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p... 26 4.3
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 25 10.0
>SPBC776.02c |dis2|sds1, bws1|serine/threonine protein phosphatase
PP1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 175 bits (427), Expect = 4e-45
Identities = 75/81 (92%), Positives = 78/81 (96%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTD 190
DRGKQSLE ICLLLAYKIKYPENFF+LRGNHECASINRIYGFYDECKRRYNIKLWKTFTD
Sbjct: 94 DRGKQSLEVICLLLAYKIKYPENFFILRGNHECASINRIYGFYDECKRRYNIKLWKTFTD 153
Query: 191 CFNCLPVAAIVDEKIFCCHGG 253
CFNCLP+AAI+DEKIF HGG
Sbjct: 154 CFNCLPIAAIIDEKIFTMHGG 174
Score = 157 bits (382), Expect = 1e-39
Identities = 66/83 (79%), Positives = 75/83 (90%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
PDL +M+QI+RIMRPTDVPD GLLCDLLWSDPDKD GWG+NDRGVSFTFG +VV +FL
Sbjct: 177 PDLNSMDQIQRIMRPTDVPDTGLLCDLLWSDPDKDLTGWGDNDRGVSFTFGPDVVSRFLH 236
Query: 439 KHEFDLICRAHQVVEDGYEFFAK 507
KH+ DL+CRAHQVVEDGYEFF+K
Sbjct: 237 KHDMDLVCRAHQVVEDGYEFFSK 259
Score = 72.5 bits (170), Expect = 5e-14
Identities = 31/36 (86%), Positives = 35/36 (97%)
Frame = +3
Query: 504 EEQLVTLFSAPNYCGEFDNAGALMSVDETLMCSFQI 611
+ QLVTLFSAPNYCGEFDNAGA+MSVDE+L+CSFQI
Sbjct: 259 KRQLVTLFSAPNYCGEFDNAGAMMSVDESLLCSFQI 294
>SPCC31H12.05c |sds21||serine/threonine protein phosphatase
Sds21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 322
Score = 171 bits (417), Expect = 6e-44
Identities = 73/81 (90%), Positives = 77/81 (95%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTD 190
DRGKQSLE ICLL AYKIKYPENFFLLRGNHE ASINRIYGFYDECKRRY+IKLWKTFTD
Sbjct: 91 DRGKQSLEVICLLFAYKIKYPENFFLLRGNHEFASINRIYGFYDECKRRYSIKLWKTFTD 150
Query: 191 CFNCLPVAAIVDEKIFCCHGG 253
CFNC+PVAA++DEKIFC HGG
Sbjct: 151 CFNCMPVAAVIDEKIFCMHGG 171
Score = 152 bits (369), Expect = 4e-38
Identities = 62/83 (74%), Positives = 74/83 (89%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
PDL +++QI+RI+RPTD+PD GLLCDL+WSDP+KD GWGENDRGVS+TFG +VV +FL
Sbjct: 174 PDLNSLDQIQRIIRPTDIPDTGLLCDLVWSDPEKDLTGWGENDRGVSYTFGADVVSRFLQ 233
Query: 439 KHEFDLICRAHQVVEDGYEFFAK 507
KH+ DLICRAHQVVEDGYEFF K
Sbjct: 234 KHDLDLICRAHQVVEDGYEFFGK 256
Score = 67.3 bits (157), Expect = 2e-12
Identities = 28/36 (77%), Positives = 33/36 (91%)
Frame = +3
Query: 504 EEQLVTLFSAPNYCGEFDNAGALMSVDETLMCSFQI 611
+ QLVT+FSAPNYCGEFDN GA+MSV+E L+CSFQI
Sbjct: 256 KRQLVTIFSAPNYCGEFDNVGAMMSVNEDLLCSFQI 291
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 149 bits (362), Expect = 3e-37
Identities = 63/81 (77%), Positives = 71/81 (87%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTD 190
DRGKQSLETI LL YKI+YPENFFLLRGNHECA+I R+YGFYDECKRR NIK+WKTF +
Sbjct: 279 DRGKQSLETILLLFLYKIRYPENFFLLRGNHECANITRVYGFYDECKRRCNIKIWKTFIN 338
Query: 191 CFNCLPVAAIVDEKIFCCHGG 253
FNCLP+A++V KIFC HGG
Sbjct: 339 TFNCLPIASVVAGKIFCVHGG 359
Score = 119 bits (287), Expect = 3e-28
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
P L M+ IR I RPTDVPD GLL DLLWSDP W +N+RGVSF F V+ +FL+
Sbjct: 362 PSLSHMDDIREIPRPTDVPDYGLLNDLLWSDPADTENDWEDNERGVSFVFNKNVIRQFLA 421
Query: 439 KHEFDLICRAHQVVEDGYEFF 501
KH+FDLICRAH VVEDGYEFF
Sbjct: 422 KHDFDLICRAHMVVEDGYEFF 442
Score = 57.2 bits (132), Expect = 2e-09
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +3
Query: 504 EEQLVTLFSAPNYCGEFDNAGALMSVDETLMCSFQI 611
+ L T+FSAPNYCGEFDN GA+MSV+ L+CSF++
Sbjct: 444 DRTLCTVFSAPNYCGEFDNWGAVMSVNSELLCSFEL 479
>SPAC823.15 |ppa1||minor serine/threonine protein phosphatase
Ppa1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 110 bits (265), Expect = 2e-25
Identities = 44/82 (53%), Positives = 63/82 (76%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFT 187
DRG S+ET+ LL+A+KI+YP+ +LRGNHE I ++YGFYDEC R+Y N +W+ FT
Sbjct: 88 DRGYHSVETVSLLIAFKIRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWQYFT 147
Query: 188 DCFNCLPVAAIVDEKIFCCHGG 253
D F+ LP+ A+++++IFC HGG
Sbjct: 148 DLFDYLPLTALIEDRIFCLHGG 169
Score = 84.2 bits (199), Expect = 2e-17
Identities = 36/85 (42%), Positives = 52/85 (61%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
P + ++ +R + R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ F
Sbjct: 172 PSIDTLDHVRILDRVQEVPHEGPICDLLWSDPD-DRPGWGISPRGAGYTFGPDIAEAFNH 230
Query: 439 KHEFDLICRAHQVVEDGYEFFAKSN 513
+ DLI RAHQ+V +GY + N
Sbjct: 231 NNGLDLIARAHQLVMEGYNWTTNHN 255
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +3
Query: 513 LVTLFSAPNYCGEFDNAGALMSVDETLMCSF 605
+VT+FSAPNYC N A+M +D+ + +F
Sbjct: 256 VVTIFSAPNYCYRCGNQAAIMGIDDHINYAF 286
>SPBC16H5.07c |ppa2||serine/threonine protein phosphatase
Ppa2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 103 bits (246), Expect = 3e-23
Identities = 41/82 (50%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFT 187
DRG S+ET+ LL+A K++YP +LRGNHE I ++YGFYDEC R+Y + +WK FT
Sbjct: 101 DRGYHSVETVSLLVAMKLRYPNRITILRGNHESRQITQVYGFYDECLRKYGSANVWKHFT 160
Query: 188 DCFNCLPVAAIVDEKIFCCHGG 253
+ F+ P+ A+++++IFC HGG
Sbjct: 161 NLFDYFPLTALIEDRIFCLHGG 182
Score = 77.4 bits (182), Expect = 2e-15
Identities = 32/80 (40%), Positives = 50/80 (62%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
P + +++ +R + R +VP +G +CDLLWSDPD D GWG + RG +TFG ++ F
Sbjct: 185 PSIDSLDHVRTLDRVQEVPHEGPMCDLLWSDPD-DRCGWGISPRGAGYTFGQDISETFNH 243
Query: 439 KHEFDLICRAHQVVEDGYEF 498
+ L RAHQ+V +G+ +
Sbjct: 244 ANGLSLTARAHQLVMEGFNW 263
Score = 36.7 bits (81), Expect = 0.003
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = +3
Query: 513 LVTLFSAPNYCGEFDNAGALMSVDETL 593
+VT+FSAPNYC N A++ VD+T+
Sbjct: 269 VVTIFSAPNYCYRCGNQAAILEVDDTM 295
>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 307
Score = 101 bits (242), Expect = 9e-23
Identities = 44/82 (53%), Positives = 57/82 (69%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFT 187
DRG S+ETI LL+ K++YP+ LLRGNHE I + YGFY EC R+Y N +WK FT
Sbjct: 82 DRGYYSIETITLLICLKLRYPKRITLLRGNHESRGITQTYGFYSECLRKYGNANVWKYFT 141
Query: 188 DCFNCLPVAAIVDEKIFCCHGG 253
D F+ L ++A +D+ IFC HGG
Sbjct: 142 DIFDFLTLSATIDDTIFCVHGG 163
Score = 66.9 bits (156), Expect = 3e-12
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
P +Q ++QI + R + P +G + DL+WSDPD + + RG F+FG +V KFL
Sbjct: 166 PSIQHIDQILVLDRFREFPHEGPMADLVWSDPDPSVQEFSLSPRGAGFSFGEVIVTKFLE 225
Query: 439 KHEFDLICRAHQVVEDGYEFFAKSNSS 519
+ I RAHQ+ +GY+ + S
Sbjct: 226 YNNMKHILRAHQLCSEGYQILFEKKLS 252
Score = 32.7 bits (71), Expect = 0.050
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 492 RVLCEEQLVTLFSAPNYCGEFDNAGALMSVD 584
++L E++L T++SAPNYC N +++ +D
Sbjct: 244 QILFEKKLSTVWSAPNYCYRCANLASILQID 274
>SPBC26H8.05c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 94.3 bits (224), Expect = 1e-20
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFT 187
DRG S+ET LLL K KYP+ L+RGNHE I ++YGFYDEC R+Y + +W+
Sbjct: 84 DRGFYSVETFLLLLTLKCKYPKEMTLIRGNHESRQITQVYGFYDECVRKYGSANVWRYCC 143
Query: 188 DCFNCLPVAAIVDEKIFCCHGG 253
+ F+ L + A+VD K+FC HGG
Sbjct: 144 EIFDYLSLGALVDGKVFCVHGG 165
Score = 81.8 bits (193), Expect = 8e-17
Identities = 35/79 (44%), Positives = 52/79 (65%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
P + +++QIR + R +VP +G +CDLLWSDP+ D +GWG + RG F FG +V F
Sbjct: 168 PSISSIDQIRLLDRKQEVPHEGAMCDLLWSDPE-DISGWGLSPRGAGFLFGADVSEVFNR 226
Query: 439 KHEFDLICRAHQVVEDGYE 495
++ I RAHQ+V +GY+
Sbjct: 227 ANDLSFIARAHQLVMEGYK 245
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/77 (28%), Positives = 38/77 (49%)
Frame = +3
Query: 381 ERSRSQLHFWNRSRGQVLVQTRVRLDMSRAPGRRGWIRVLCEEQLVTLFSAPNYCGEFDN 560
++ + F N ++ + +D S APG I + +VT++SAPNYC N
Sbjct: 250 DKDKQYPKFTNEEDSELDSDSASPVDDSPAPGDIITIPEKDKGSVVTVWSAPNYCYRCGN 309
Query: 561 AGALMSVDETLMCSFQI 611
+++ +DE SF+I
Sbjct: 310 VASILQLDENQTQSFKI 326
>SPCC1739.12 |ppe1|esp1, ppx1|serine/threonine protein phosphatase
Ppe1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 305
Score = 93.9 bits (223), Expect = 2e-20
Identities = 41/82 (50%), Positives = 53/82 (64%), Gaps = 1/82 (1%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRY-NIKLWKTFT 187
DRG SLET L + K +YP+ LLRGNHE I ++YGFYDEC+ +Y N +WK
Sbjct: 82 DRGYFSLETFTLFMLLKARYPDKITLLRGNHESRQITQVYGFYDECQTKYGNANVWKYCC 141
Query: 188 DCFNCLPVAAIVDEKIFCCHGG 253
F+ L +AA++D KI C HGG
Sbjct: 142 QVFDFLTLAAVIDNKILCVHGG 163
Score = 80.2 bits (189), Expect = 3e-16
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFLS 438
P+++ ++QIR + R ++P +G CDL+WSDP+ D W + RG + FG++V +F
Sbjct: 166 PEVRTLDQIRILARAQEIPHEGSFCDLMWSDPE-DIESWTVSPRGAGWLFGSKVTTEFSQ 224
Query: 439 KHEFDLICRAHQVVEDGYEF-FAKSN 513
++ LI RAHQ+V++GY++ FA N
Sbjct: 225 INDLTLIARAHQLVQEGYKYHFADKN 250
Score = 39.9 bits (89), Expect = 3e-04
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 477 RRGWIRVLCEEQLVTLFSAPNYCGEFDNAGALMSVDETLMCSFQI 611
+ G+ ++ LVT++SAPNYC N ++M VDE+L F+I
Sbjct: 239 QEGYKYHFADKNLVTVWSAPNYCYRCGNVASVMKVDESLEPEFRI 283
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 86.2 bits (204), Expect = 4e-18
Identities = 38/81 (46%), Positives = 53/81 (65%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTD 190
DRG S+E + L A KI YP+ +LLRGNHECA + + F EC +YNIK+++
Sbjct: 150 DRGYFSIECLLYLWALKIWYPKTLWLLRGNHECAHLTDYFTFKLECTHKYNIKVYEACLQ 209
Query: 191 CFNCLPVAAIVDEKIFCCHGG 253
FN LP+AAI++++ C HGG
Sbjct: 210 SFNALPLAAIMNKQFLCVHGG 230
Score = 58.8 bits (136), Expect = 7e-10
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = +1
Query: 259 PDLQAMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTAGWGEND-------RGVSFTFGTE 417
P+L + IR I R + P GL+CDLLWSDP +D N RG S+ + +
Sbjct: 233 PELHTLNDIRMINRFCEPPTHGLMCDLLWSDPLEDFGSEKSNKHFIHNNVRGCSYFYSYQ 292
Query: 418 VVGKFLSKHEFDLICRAHQVVEDGYEFFAKSNSS 519
V FL + + RAH+ + GY + K+ ++
Sbjct: 293 AVCTFLENNNLLSVIRAHEAQDVGYRMYRKTKTT 326
Score = 30.3 bits (65), Expect = 0.27
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 513 LVTLFSAPNYCGEFDNAGALMSVDETLM 596
L+T+FSAPNY ++N A++ + +M
Sbjct: 331 LMTIFSAPNYLDVYNNKAAVLKYENNVM 358
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 80.6 bits (190), Expect = 2e-16
Identities = 32/81 (39%), Positives = 50/81 (61%)
Frame = +2
Query: 11 DRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTD 190
DRG S E L AYK+ YP+ F+ RGNHE +N++YGF EC+ +YN + + F++
Sbjct: 249 DRGSWSTEVAFTLYAYKLLYPDAVFINRGNHETDDMNKVYGFEGECRSKYNERTFNIFSE 308
Query: 191 CFNCLPVAAIVDEKIFCCHGG 253
F+ LP+ +++ + HGG
Sbjct: 309 TFSLLPLGSLISDSYLVVHGG 329
Score = 50.8 bits (116), Expect = 2e-07
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +1
Query: 262 DLQAMEQIRRIMR-PTDVPDQ-GLLCDLLWSDPDKDTAGWGENDRGVSFTFGTEVVGKFL 435
D ++Q+R I R P Q GL+ ++LW+DP + G G + RGV FG +V +F
Sbjct: 334 DNVTLDQLRNIDRFSKKQPGQSGLMMEMLWTDP-QPAPGRGPSKRGVGLQFGPDVSKRFC 392
Query: 436 SKHEFDLICRAHQVVEDGYE 495
+ + R+H+V + GYE
Sbjct: 393 EANGLKAVIRSHEVRDQGYE 412
Score = 35.1 bits (77), Expect = 0.009
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 516 VTLFSAPNYCGEFDNAGALMSVDETLMCSF 605
+T+FSAPNYC N GA++ V E + F
Sbjct: 420 ITVFSAPNYCDSTGNLGAVIKVKEDMELDF 449
>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 361 DTAGWGENDRGVSFTFGTEV 420
D GWG + GVS FGT +
Sbjct: 134 DDGGWGIHTEGVSTVFGTSM 153
>SPBC359.02 |alr2||alanine racemase Alr2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 370
Score = 26.2 bits (55), Expect = 4.3
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 65 KYPENFFLLRGNHECASINRI--YGFYD-ECKRRYNIKLWKTFTDCFNCLP 208
+Y + + LL+ + + I + + F D K Y +K W+ F CLP
Sbjct: 144 EYADKYRLLKNHKNVSGIVKATHFAFADIPEKSEYTLKQWRIFEKAAGCLP 194
>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 673
Score = 26.2 bits (55), Expect = 4.3
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 601 RSRSEAGRQAQLYSGLNMGRP 663
R R+E + Q+YS LNM RP
Sbjct: 554 RQRAERDTEEQIYSELNMQRP 574
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 25.0 bits (52), Expect = 10.0
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 565 PALSNSPQ*-FGAEKSVTSCSSQRTRIHPRRPGA 467
P+L + PQ A +V+S +++TR+ PRR A
Sbjct: 271 PSLESVPQKRLNASSNVSSNPAKKTRVSPRRSTA 304
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,805,966
Number of Sequences: 5004
Number of extensions: 57030
Number of successful extensions: 195
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 184
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 309878492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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