Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20109
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    73   2e-13
Z54236-2|CAE46661.1|  313|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z54236-1|CAA90979.2|  312|Caenorhabditis elegans Hypothetical pr...    43   2e-04
AF321546-1|AAG42102.1|  312|Caenorhabditis elegans suppressor of...    43   2e-04
U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical pr...    31   0.62 
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin recepto...    28   4.4  
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p...    28   5.8  
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr...    27   7.6  
Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical pr...    27   7.6  
AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin ...    27   7.6  
AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical ...    27   7.6  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 32/71 (45%), Positives = 41/71 (57%)
 Frame = +3

Query: 255 LKCLQDIKVQMHEDPISFTLEFYFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPEIYS 434
           L  L D+     +DP  F +EF+FA N YF N VLTK YL+   PD E+PL+F+GP +  
Sbjct: 139 LSYLTDVTTAASKDPAGFKIEFHFATNPYFKNQVLTKTYLLGFDPDAEAPLQFDGPHVIR 198

Query: 435 CKGCEINWNAG 467
             G  I W  G
Sbjct: 199 AVGDTIEWEDG 209



 Score = 40.3 bits (90), Expect = 0.001
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 160 DPNVKGIPDFWYNIFRNVSMLSEMMQEHDEPI 255
           DP+ KGI DFW    R   +++E ++EHD PI
Sbjct: 107 DPSAKGIKDFWLTALRTHDLVAEAIEEHDVPI 138



 Score = 33.1 bits (72), Expect = 0.15
 Identities = 13/30 (43%), Positives = 21/30 (70%)
 Frame = +2

Query: 494 EETEAKSRGSVRTVTKSVQAXSFFNFFNPP 583
           ++ + K   + + +TK+V+A SFFNFF PP
Sbjct: 218 KKKQKKGANAGKFLTKTVKADSFFNFFEPP 247


>Z54236-2|CAE46661.1|  313|Caenorhabditis elegans Hypothetical
           protein C27B7.1b protein.
          Length = 313

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 255 LKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPE 425
           L  L+D++VQ  ED  S F +   F PNEYFTN V+TK Y ++ +       E E  E
Sbjct: 103 LAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEWKE 160


>Z54236-1|CAA90979.2|  312|Caenorhabditis elegans Hypothetical
           protein C27B7.1a protein.
          Length = 312

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 255 LKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPE 425
           L  L+D++VQ  ED  S F +   F PNEYFTN V+TK Y ++ +       E E  E
Sbjct: 103 LAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEWKE 160


>AF321546-1|AAG42102.1|  312|Caenorhabditis elegans suppressor of
           presenilin 2 protein.
          Length = 312

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
 Frame = +3

Query: 255 LKCLQDIKVQMHEDPIS-FTLEFYFAPNEYFTNTVLTKEYLMKCKPDEESPLEFEGPE 425
           L  L+D++VQ  ED  S F +   F PNEYFTN V+TK Y ++ +       E E  E
Sbjct: 103 LAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYHLQSESPSTEITEIEWKE 160


>U50069-2|AAB37558.1|  328|Caenorhabditis elegans Hypothetical
           protein C09B9.2 protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 0.62
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = -2

Query: 382 HFIKYSLVSTVFVKYSFGAK*NSRVKLMGSSCICTLISCKHFRLV 248
           HF+   L+ + F++ SF +K     ++ G S + ++ +C HF +V
Sbjct: 134 HFVLLFLMFSFFLQSSFSSKSRFVEQIFGMSAVSSMSTCAHFIIV 178


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 49  NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 162
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>U46673-1|AAC48153.4| 1003|Caenorhabditis elegans Insulin receptor
           substrate homologprotein 1 protein.
          Length = 1003

 Score = 28.3 bits (60), Expect = 4.4
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 387 PDEESPLEFEGPEIYSCKGCEINW 458
           P +E P EF  PE+Y C  C + +
Sbjct: 95  PKDEDPDEFGIPEVYKCGNCLVGF 118


>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
            protein T20D3.11 protein.
          Length = 1843

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = -3

Query: 93   RPS*LFFFSVITPWVETFIIIRFICAIHLVP 1
            RPS  F+ ++IT + E  I+I+F+C    +P
Sbjct: 1052 RPSKFFWVTMIT-YTECVIVIKFVCQFAFMP 1081


>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
           protein T24A11.1b protein.
          Length = 1006

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 55  WRDDTEEEELARAVQNAAITEGEEKK 132
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 337 WRNPTDEKIIEEAVKASRI-EGEEKK 361


>Z49072-1|CAA88884.1|  938|Caenorhabditis elegans Hypothetical
           protein T24A11.1a protein.
          Length = 938

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 55  WRDDTEEEELARAVQNAAITEGEEKK 132
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 333 WRNPTDEKIIEEAVKASRI-EGEEKK 357


>AF031519-1|AAC78763.1|  930|Caenorhabditis elegans myotubularin
           homologous protein 1 protein.
          Length = 930

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 13/26 (50%), Positives = 19/26 (73%)
 Frame = +1

Query: 55  WRDDTEEEELARAVQNAAITEGEEKK 132
           WR+ T+E+ +  AV+ + I EGEEKK
Sbjct: 337 WRNPTDEKIIEEAVKASRI-EGEEKK 361


>AC024803-1|AAL05589.4|  433|Caenorhabditis elegans Hypothetical
           protein Y51H7BM.1 protein.
          Length = 433

 Score = 27.5 bits (58), Expect = 7.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 202 ICCTKSLGYPLHW 164
           +CC K LGYP +W
Sbjct: 52  LCCEKELGYPSNW 64


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,724,009
Number of Sequences: 27780
Number of extensions: 258894
Number of successful extensions: 885
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)