Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20107
(796 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A5DLN1 Cluster: Putative uncharacterized protein; n=1; ... 38 0.29
UniRef50_A4C3J8 Cluster: Fibronectin type III domain protein; n=... 36 1.2
UniRef50_A2VEC9 Cluster: SCO-spondin precursor; n=19; Eutheria|R... 36 1.2
UniRef50_Q5KL31 Cluster: Vacuolar membrane-associated protein IM... 36 1.5
UniRef50_Q86IW7 Cluster: Similar to Mus musculus (Mouse). 13 day... 33 8.3
UniRef50_Q6C2R6 Cluster: Similar to tr|Q9P7S9 Schizosaccharomyce... 33 8.3
UniRef50_Q8CG65 Cluster: SCO-spondin precursor; n=10; Eutheria|R... 33 8.3
>UniRef50_A5DLN1 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 588
Score = 37.9 bits (84), Expect = 0.29
Identities = 32/83 (38%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 282 TTPSMKQTQNSLPSYLSNLAPG-FAMDPTQSNVKHTDG-AIQNDENDLHNQ---EAPQSQ 446
T P QTQNS N+ PG A P Q N G QN N + NQ +PQ+Q
Sbjct: 465 TAPDQAQTQNSPHQGFRNMPPGLMAQGPNQGNQMQNQGNPGQNLGNSMQNQGNVMSPQNQ 524
Query: 447 KVGGIFAFRPQGVPFPQPGMSHS 515
K F P GVP PG +S
Sbjct: 525 KNMRYQGF-PPGVP---PGFMYS 543
>UniRef50_A4C3J8 Cluster: Fibronectin type III domain protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Fibronectin type III
domain protein - Pseudoalteromonas tunicata D2
Length = 1809
Score = 35.9 bits (79), Expect = 1.2
Identities = 25/88 (28%), Positives = 37/88 (42%)
Frame = +3
Query: 231 FTETDHKGLRDAYSKCSTTPSMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDE 410
F ++D G+ D S M++ SYL PG M + G I+
Sbjct: 1212 FKDSDQDGVPDYLDAISECNVMQEQALQANSYLVESEPGICMRKGSTIANSKTGGIELLS 1271
Query: 411 NDLHNQEAPQSQKVGGIFAFRPQGVPFP 494
N+L A + +GGIF F +G+P P
Sbjct: 1272 NELPADMA--ADNLGGIFDFILEGLPKP 1297
>UniRef50_A2VEC9 Cluster: SCO-spondin precursor; n=19; Eutheria|Rep:
SCO-spondin precursor - Homo sapiens (Human)
Length = 5147
Score = 35.9 bits (79), Expect = 1.2
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 445 CDCGAS*LCKSFSSFCIAPSVCLTLDCV-GSIAKPGAKLLR*DGKEFCVC 299
C C + S + C+ P C LD + G PGA+L R DG C C
Sbjct: 3344 CYCPPGQVLSSNGAICVQPGHCSCLDLLTGQRHHPGARLARPDGCNHCTC 3393
>UniRef50_Q5KL31 Cluster: Vacuolar membrane-associated protein IML1;
n=1; Filobasidiella neoformans|Rep: Vacuolar
membrane-associated protein IML1 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 1768
Score = 35.5 bits (78), Expect = 1.5
Identities = 36/113 (31%), Positives = 47/113 (41%)
Frame = +3
Query: 240 TDHKGLRDAYSKCSTTPSMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDENDL 419
T K LR SK PS NS LS P FA+ P NV TD A +D
Sbjct: 802 TPAKSLRSQPSK-GFIPSW--VLNSFKPLLSTSKPSFAV-PAMENVARTDVATGDD---- 853
Query: 420 HNQEAPQSQKVGGIFAFRPQGVPFPQPGMSHS*CRPGRSSARITRPCSSCLTR 578
N+ + S VG + +G P P+P ++ S P RS +P T+
Sbjct: 854 -NRPSSPSPSVGSLRGRPSKGGPNPKPIITPSTPSPSRSQKPPFKPAKIIQTQ 905
>UniRef50_Q86IW7 Cluster: Similar to Mus musculus (Mouse). 13 days
embryo heart cDNA, RIKEN full-length enriched library,
clone:D330046B13 product:minichromosome maintenance
deficient (S. cerevisiae) 3-associated protein, full
insert sequence; n=2; Dictyostelium discoideum|Rep:
Similar to Mus musculus (Mouse). 13 days embryo heart
cDNA, RIKEN full-length enriched library,
clone:D330046B13 product:minichromosome maintenance
deficient (S. cerevisiae) 3-associated protein, full
insert sequence - Dictyostelium discoideum (Slime mold)
Length = 2102
Score = 33.1 bits (72), Expect = 8.3
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +3
Query: 282 TTPSMKQTQNSLPSYLSNLAPGFAMDPTQSNVKHTDGAIQNDENDLHNQE 431
TTP++ Q+ N L S SNL+ PT SN I N+E++ +N +
Sbjct: 1058 TTPNITQSSNLLNSGSSNLSSNSLFSPTISNTTPKTPTIFNNESNNNNNK 1107
>UniRef50_Q6C2R6 Cluster: Similar to tr|Q9P7S9 Schizosaccharomyces
pombe SPAC23G3.04; n=1; Yarrowia lipolytica|Rep: Similar
to tr|Q9P7S9 Schizosaccharomyces pombe SPAC23G3.04 -
Yarrowia lipolytica (Candida lipolytica)
Length = 127
Score = 33.1 bits (72), Expect = 8.3
Identities = 19/73 (26%), Positives = 30/73 (41%)
Frame = +3
Query: 405 DENDLHNQEAPQSQKVGGIFAFRPQGVPFPQPGMSHS*CRPGRSSARITRPCSSCLTRAT 584
D + + P SQ G P+G P P+PG SH+ P + + I +
Sbjct: 23 DRSSAPSSPMPASQAASGSSTPAPKGKPGPKPGSSHTKSGPKDTDSAINSQLRALDRTGK 82
Query: 585 CPRGYPTTPTILR 623
PR + TP ++
Sbjct: 83 PPRHWVKTPVQIK 95
>UniRef50_Q8CG65 Cluster: SCO-spondin precursor; n=10; Eutheria|Rep:
SCO-spondin precursor - Mus musculus (Mouse)
Length = 4998
Score = 33.1 bits (72), Expect = 8.3
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -1
Query: 445 CDCGAS*LCKSFSSFCIAPSVCLTLDCV-GSIAKPGAKLLR*DGKEFCVC 299
C C + + + C+ PS C LD + G G +L+R DG C C
Sbjct: 3180 CYCPLGKVLSADGAICVKPSYCSCLDLLTGKRHHAGTQLMRPDGCNHCTC 3229
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,923,592
Number of Sequences: 1657284
Number of extensions: 12923710
Number of successful extensions: 41216
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 39509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41204
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 67908372675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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