Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20105
         (441 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.9  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.9  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    21   6.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   9.1  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    20   9.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    20   9.1  

>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3

Query: 292 PPLPQGFPLSLP 257
           PPLPQ  PL LP
Sbjct: 175 PPLPQVPPLPLP 186


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 106 RTRLGDAIDKTSLKILKESYNLADDKNVIASP 201
           +  L  A+D     +L   +NL   K+ IA P
Sbjct: 619 KINLKHALDLDRRGLLHRQFNLPPSKDTIAVP 650


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = +1

Query: 106 RTRLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSL 228
           +  L  A+D     +L   +NL   K+ IA P    ++L L
Sbjct: 619 KINLKHALDLDRQGLLHRQFNLPPAKDTIAVPNNGYVVLRL 659


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = -3

Query: 211 SRREETLSHSCRQLGCRIP*ESSRRSCRWHRRVLSLRIHDRTCRT 77
           S R   L+ +CR     +   +S  S R+ R ++  R H R   T
Sbjct: 241 SPRARPLARTCRDNRLLVLAGTSSPSNRFTRHLIQRRTHTRHTTT 285


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 329  SVTQNSTRNS*LSPIKYTFPTSISWPTR 412
            + T+ +T     +    T PT+ +WPT+
Sbjct: 1055 TTTRRTTTTRPTTTSTTTRPTTTNWPTQ 1082


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -2

Query: 143 KEVLSMASPSLVLENS*PNM*NACVPHTN 57
           KE+ + ++  ++ E   PN+ +A  P+ N
Sbjct: 829 KEIPAKSAEQILAEGGCPNLYDARKPYVN 857


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 10/45 (22%), Positives = 24/45 (53%)
 Frame = +1

Query: 37  RLLLLVTLVCGTQAFYMFGHEFSRTRLGDAIDKTSLKILKESYNL 171
           R++L+ +     ++F+  G+E S+  + +   K S ++    +NL
Sbjct: 78  RIILVFSKGKVIKSFFNQGYELSKQEIFNCCSKKSFRMNFAIFNL 122


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,078
Number of Sequences: 336
Number of extensions: 1964
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9880622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)