Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20104
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   4.0  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   5.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   5.3  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   7.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   9.3  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 210 YLRCRSEEFCDYQWNTKSIIRFS 142
           YL+ R  E   YQW+  +   FS
Sbjct: 415 YLKSRDPERTPYQWDNSTSAGFS 437


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 392 IHILCESNEELGDMPPQCSGEMQA--CAYLC 478
           +HI  +  +E+G +   CSG++    C   C
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFC 73


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = +2

Query: 392 IHILCESNEELGDMPPQCSGEMQA--CAYLC 478
           +HI  +  +E+G +   CSG++    C   C
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFC 73


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 186 FCDYQWNTKSIIRFSDLPIIVQKSHCR 106
           F +YQ N  +I  F +  I   K H R
Sbjct: 153 FKEYQMNGNNITNFKNSNIFQLKQHMR 179


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = -1

Query: 418 FVTFT*NMNWINKITYSIIYNN 353
           F  F   +NW + +   + YNN
Sbjct: 47  FTNFDKGINWRSYVVCDVAYNN 68


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,263
Number of Sequences: 438
Number of extensions: 4135
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)