Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20103
         (781 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117202-30|CAO82060.1|  449|Caenorhabditis elegans Hypothetical...    32   0.40 
AL117202-29|CAO82059.1|  842|Caenorhabditis elegans Hypothetical...    32   0.40 
AL117202-15|CAC42376.1|  627|Caenorhabditis elegans Hypothetical...    32   0.40 
AL117202-14|CAB57894.2|  766|Caenorhabditis elegans Hypothetical...    32   0.40 
AL132904-16|CAC35849.1|  340|Caenorhabditis elegans Hypothetical...    28   6.5  
AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical ...    28   6.5  

>AL117202-30|CAO82060.1|  449|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17d protein.
          Length = 449

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 166 NPPDDRISPTTSTHITGDE*RQNA-WSTILHNSLPVPQQEEIVQERKFAEKPNALKK 333
           N P++ ++PT S         +N  W       L + +++ +V+ R+ AEK  A+KK
Sbjct: 346 NEPEEGVAPTDSRLRPDQRLMENGEWDEANRKKLEIEEKQRVVRRRREAEKELAMKK 402


>AL117202-29|CAO82059.1|  842|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17c protein.
          Length = 842

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 166 NPPDDRISPTTSTHITGDE*RQNA-WSTILHNSLPVPQQEEIVQERKFAEKPNALKK 333
           N P++ ++PT S         +N  W       L + +++ +V+ R+ AEK  A+KK
Sbjct: 739 NEPEEGVAPTDSRLRPDQRLMENGEWDEANRKKLEIEEKQRVVRRRREAEKELAMKK 795


>AL117202-15|CAC42376.1|  627|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17b protein.
          Length = 627

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 166 NPPDDRISPTTSTHITGDE*RQNA-WSTILHNSLPVPQQEEIVQERKFAEKPNALKK 333
           N P++ ++PT S         +N  W       L + +++ +V+ R+ AEK  A+KK
Sbjct: 524 NEPEEGVAPTDSRLRPDQRLMENGEWDEANRKKLEIEEKQRVVRRRREAEKELAMKK 580


>AL117202-14|CAB57894.2|  766|Caenorhabditis elegans Hypothetical
           protein Y47D3A.17a protein.
          Length = 766

 Score = 32.3 bits (70), Expect = 0.40
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
 Frame = +1

Query: 166 NPPDDRISPTTSTHITGDE*RQNA-WSTILHNSLPVPQQEEIVQERKFAEKPNALKK 333
           N P++ ++PT S         +N  W       L + +++ +V+ R+ AEK  A+KK
Sbjct: 663 NEPEEGVAPTDSRLRPDQRLMENGEWDEANRKKLEIEEKQRVVRRRREAEKELAMKK 719


>AL132904-16|CAC35849.1|  340|Caenorhabditis elegans Hypothetical
           protein Y111B2A.20 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 110 RMYSKTTGWALVALICSSTILQTIAYPQQLPLISQVTSNVRTHGPQYYITHCQYHNRK 283
           +MY+ +    L+A++ S+  LQ + YP Q+   S     V   G  +   H  YH RK
Sbjct: 93  KMYAASAASYLLAMVASNQALQYLPYPTQVLAKSCKPIPVMIFGVLF--AHKSYHWRK 148


>AF022969-1|AAB69894.3|  391|Caenorhabditis elegans Hypothetical
           protein C29G2.5 protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
 Frame = +1

Query: 157 LINNPPDDRI--SPTTSTHITGDE*RQNAWSTILHN--SLPVPQQEEIVQERKFAEKPNA 324
           L N   D+RI    TT+++ T  E  Q   S  L +  S+ +P  E++V   K    PN 
Sbjct: 101 LRNGGEDERIVRDYTTNSYTTLHEIPQAGRSETLPDKASIFLPGFEKVVPNEKTTTTPNT 160

Query: 325 LKKVAXXXXXXIQTNSI 375
           +KK+       +  NS+
Sbjct: 161 IKKLPECSTKEVMENSL 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,291,129
Number of Sequences: 27780
Number of extensions: 394188
Number of successful extensions: 1108
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)