Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20103
         (781 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.              25   1.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.7  

>DQ435329-1|ABD92644.1|  150|Apis mellifera OBP12 protein.
          Length = 150

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1

Query: 82  ESLNTVFHKVALKC 41
           E L T FHK+AL C
Sbjct: 104 EDLKTFFHKIALTC 117


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 521 THSDE*VQGDGADDSVSK 468
           T+S+E  Q DG+ DSV K
Sbjct: 305 TNSEETHQKDGSSDSVIK 322



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 419 KHFSSTVASRAPTKATPWTQNHQLRLLGLTHRYGSKNS 532
           K+     A RA  KA+P+  +H++    L   + +KN+
Sbjct: 456 KYIQRLKAIRATLKASPFFASHEVVGSSLLFVHDTKNA 493


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 521 THSDE*VQGDGADDSVSK 468
           T+S+E  Q DG+ DSV K
Sbjct: 220 TNSEETHQKDGSSDSVIK 237



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 419 KHFSSTVASRAPTKATPWTQNHQLRLLGLTHRYGSKNS 532
           K+     A RA  KA+P+  +H++    L   + +KN+
Sbjct: 371 KYIQRLKAIRATLKASPFFASHEVVGSSLLFVHDTKNA 408


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 521 THSDE*VQGDGADDSVSK 468
           T+S+E  Q DG+ DSV K
Sbjct: 539 TNSEETHQKDGSSDSVIK 556



 Score = 21.4 bits (43), Expect = 9.7
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 419 KHFSSTVASRAPTKATPWTQNHQLRLLGLTHRYGSKNS 532
           K+     A RA  KA+P+  +H++    L   + +KN+
Sbjct: 690 KYIQRLKAIRATLKASPFFASHEVVGSSLLFVHDTKNA 727


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +1

Query: 439 GVTGPNKSDTLDT 477
           GVTG    DTLDT
Sbjct: 63  GVTGEEPFDTLDT 75


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,796
Number of Sequences: 438
Number of extensions: 4446
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24518154
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)