Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20100
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    25   0.44 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   2.3  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   4.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.2  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.5  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
 Frame = +1

Query: 178 DHSVLCCVHRHRASHRRCRQEPGGDDPNNTIFDAKRLI--GRKFEDATVQADMKHWPF 345
           DH  +  +H +  SH   +QEP G   +N  F   RL+       D  + ADM  + +
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGY 396


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 130 LPAREGGDHRQRPGQQDH 183
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +3

Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 482
           KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 244 KPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -2

Query: 129 TPTQEYVVPRSIPT 88
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/20 (45%), Positives = 15/20 (75%)
 Frame = -1

Query: 502 VITAFCTVLPR*ASAVSFIF 443
           +ITAF +VLP+ A  +++ F
Sbjct: 87  LITAFLSVLPQLAWDITYRF 106


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,176
Number of Sequences: 336
Number of extensions: 3202
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)