Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20100
(553 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70... 120 9e-28
At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1 (HS... 118 3e-27
At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2 (HS... 118 3e-27
At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3 (HS... 118 3e-27
At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein, puta... 118 3e-27
At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70... 108 3e-24
At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)... 100 7e-22
At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)... 100 7e-22
At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)... 100 7e-22
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 99 2e-21
At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)... 65 3e-11
At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)... 63 1e-10
At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70... 63 1e-10
At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial, p... 58 4e-09
At1g79930.1 68414.m09340 heat shock protein, putative contains P... 48 4e-06
At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70... 48 4e-06
At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70... 48 4e-06
At1g11660.1 68414.m01339 heat shock protein, putative strong sim... 44 7e-05
At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70... 36 0.014
At2g32120.2 68415.m03926 heat shock protein 70 family protein / ... 34 0.055
At2g32120.1 68415.m03925 heat shock protein 70 family protein / ... 34 0.055
At4g24910.1 68417.m03566 hypothetical protein contains Pfam prof... 29 1.6
At2g27350.5 68415.m03295 OTU-like cysteine protease family prote... 29 2.7
At2g27350.4 68415.m03294 OTU-like cysteine protease family prote... 29 2.7
At2g27350.3 68415.m03293 OTU-like cysteine protease family prote... 29 2.7
At2g27350.2 68415.m03292 OTU-like cysteine protease family prote... 29 2.7
At2g27350.1 68415.m03291 OTU-like cysteine protease family prote... 29 2.7
At5g52410.2 68418.m06502 expressed protein 28 3.6
At4g27630.2 68417.m03972 expressed protein 28 3.6
At4g34940.1 68417.m04953 armadillo/beta-catenin repeat family pr... 28 4.8
At4g18375.2 68417.m02727 KH domain-containing protein contains s... 27 6.3
At4g18375.1 68417.m02726 KH domain-containing protein contains s... 27 6.3
At3g02270.1 68416.m00208 eIF4-gamma/eIF5/eIF2-epsilon domain-con... 27 6.3
At1g68330.1 68414.m07805 expressed protein 27 6.3
At1g04670.1 68414.m00464 expressed protein ; expression supporte... 27 6.3
At3g25790.1 68416.m03210 myb family transcription factor contain... 27 8.3
At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive eff... 27 8.3
>At3g12580.1 68416.m01567 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein
GI:425194 [Spinacia oleracea]
Length = 650
Score = 120 bits (288), Expect = 9e-28
Identities = 54/62 (87%), Positives = 59/62 (95%)
Frame = +2
Query: 77 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMT 256
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAM
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 257 PT 262
PT
Sbjct: 66 PT 67
Score = 66.1 bits (154), Expect = 1e-11
Identities = 31/48 (64%), Positives = 38/48 (79%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
KP I V +KGE+K F EE+SSMVL KM+E AEA+LG V+NAV+TVP
Sbjct: 104 KPMIVVNHKGEEKQFSAEEISSMVLIKMREIAEAFLGSPVKNAVVTVP 151
Score = 58.0 bits (134), Expect = 4e-09
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDS 357
+P NT+FDAKRLIGR++ D +VQAD HWPF+V S
Sbjct: 65 NPTNTVFDAKRLIGRRYSDPSVQADKSHWPFKVVS 99
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQRQATKDAG
Sbjct: 152 AYFNDSQRQATKDAG 166
>At5g02500.1 68418.m00183 heat shock cognate 70 kDa protein 1
(HSC70-1) (HSP70-1) identical to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}
Length = 651
Score = 118 bits (283), Expect = 3e-27
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 77 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMT 256
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAM
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 257 P 259
P
Sbjct: 66 P 66
Score = 71.3 bits (167), Expect = 4e-13
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
KP I V YKGE+K F EE+SSMVL KM+E AEAYLG T++NAV+TVP
Sbjct: 104 KPMIYVEYKGEEKEFAAEEISSMVLIKMREIAEAYLGVTIKNAVVTVP 151
Score = 58.4 bits (135), Expect = 3e-09
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEAN 369
+P NT+FDAKRLIGR+F D++VQ+DMK WPF++ + A+
Sbjct: 65 NPVNTVFDAKRLIGRRFSDSSVQSDMKLWPFKIQAGPAD 103
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQRQATKDAG
Sbjct: 152 AYFNDSQRQATKDAG 166
>At5g02490.1 68418.m00182 heat shock cognate 70 kDa protein 2
(HSC70-2) (HSP70-2) identical to SP|P22954 Heat shock
cognate 70 kDa protein 2 (Hsc70.2) {Arabidopsis
thaliana}
Length = 653
Score = 118 bits (283), Expect = 3e-27
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 77 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMT 256
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAM
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 257 P 259
P
Sbjct: 66 P 66
Score = 70.5 bits (165), Expect = 7e-13
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
KP I V YKGE+K F EE+SSMVL KM+E AEA+LG TV+NAV+TVP
Sbjct: 104 KPMIVVEYKGEEKQFAAEEISSMVLIKMREIAEAFLGTTVKNAVVTVP 151
Score = 54.4 bits (125), Expect = 5e-08
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEA 366
+P NT+FDAKRLIGR+F DA+VQ+D + WPF + S A
Sbjct: 65 NPVNTVFDAKRLIGRRFSDASVQSDRQLWPFTIISGTA 102
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQRQATKDAG
Sbjct: 152 AYFNDSQRQATKDAG 166
>At3g09440.1 68416.m01121 heat shock cognate 70 kDa protein 3
(HSC70-3) (HSP70-3) identical to SP|O65719 Heat shock
cognate 70 kDa protein 3 (Hsc70.3) {Arabidopsis
thaliana}
Length = 649
Score = 118 bits (283), Expect = 3e-27
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 77 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMT 256
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAM
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 257 P 259
P
Sbjct: 66 P 66
Score = 72.5 bits (170), Expect = 2e-13
Identities = 33/48 (68%), Positives = 39/48 (81%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
KP I V YKGEDK F EE+SSM+L KM+E AEAYLG T++NAV+TVP
Sbjct: 104 KPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVP 151
Score = 55.2 bits (127), Expect = 3e-08
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEA 366
+P NT+FDAKRLIGR+F D++VQ+D+K WPF + S A
Sbjct: 65 NPINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKSGPA 102
>At1g56410.1 68414.m06487 heat shock cognate 70 kDa protein,
putative / HSC70, putative / HSP70, putative strong
similarity to heat shock cognate 70 kd protein 1
SP:P22953 [Arabidopsis thaliana (Mouse-ear cress)]
Length = 617
Score = 118 bits (283), Expect = 3e-27
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 77 KAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMT 256
+ PA+GIDLGTTYSCVGV+QH +VEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAM
Sbjct: 6 EGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMN 65
Query: 257 P 259
P
Sbjct: 66 P 66
Score = 69.7 bits (163), Expect = 1e-12
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
KP I V YKGE+K F EE+SSMVL KM+E AEAYLG +++NAV+TVP
Sbjct: 104 KPMIFVNYKGEEKQFAAEEISSMVLIKMREIAEAYLGSSIKNAVVTVP 151
Score = 60.9 bits (141), Expect = 6e-10
Identities = 25/39 (64%), Positives = 33/39 (84%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEAN 369
+P NT+FDAKRLIGR+F DA+VQ+DMK WPF+V +A+
Sbjct: 65 NPVNTVFDAKRLIGRRFSDASVQSDMKFWPFKVTPGQAD 103
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQRQATKDAG
Sbjct: 152 AYFNDSQRQATKDAG 166
>At1g16030.1 68414.m01924 heat shock protein 70, putative / HSP70,
putative similar to heat shock protein hsp70 GI:1771478
from [Pisum sativum]
Length = 646
Score = 108 bits (259), Expect = 3e-24
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = +2
Query: 86 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTP 259
A+GIDLGTTYSCVGV+ + +VEII NDQGNRTTPSYVAFTDTERLIGDAAKNQVA+ P
Sbjct: 8 AIGIDLGTTYSCVGVWMNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVALNP 65
Score = 75.4 bits (177), Expect = 2e-14
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
KP I V+YK E+K F PEE+SSMVL KMKE AEA+LG+TV+NAV+TVP
Sbjct: 103 KPMIVVSYKNEEKQFSPEEISSMVLVKMKEVAEAFLGRTVKNAVVTVP 150
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDS 357
+P NT+FDAKRLIGRKF D +VQ+D+ HWPF+V S
Sbjct: 64 NPQNTVFDAKRLIGRKFSDPSVQSDILHWPFKVVS 98
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQRQATKDAG
Sbjct: 151 AYFNDSQRQATKDAG 165
>At5g42020.2 68418.m05116 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 613
Score = 100 bits (239), Expect = 7e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTP 259
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+ P
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNP 94
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 363 GKPKIKVAYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
GKP I+V K GE K F PEE+S+M+LTKMKETAEAYLGK +++AV+TVP
Sbjct: 130 GKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVP 179
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEANLRSR*HIR-VKTKPFSPRK 423
+P T+FD KRLIGRKFED VQ D K P+++ + + + I+ +TK FSP +
Sbjct: 93 NPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEE 150
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FND+QRQATKDAG
Sbjct: 180 AYFNDAQRQATKDAG 194
>At5g42020.1 68418.m05115 luminal binding protein 2 (BiP-2) (BP2)
similar to SWISS-PROT: Q39043; GI:1303695; luminal
binding protein (BiP) [Arabidopsis thaliana]
Length = 668
Score = 100 bits (239), Expect = 7e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTP 259
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+ P
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNP 94
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 363 GKPKIKVAYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
GKP I+V K GE K F PEE+S+M+LTKMKETAEAYLGK +++AV+TVP
Sbjct: 130 GKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVP 179
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEANLRSR*HIR-VKTKPFSPRK 423
+P T+FD KRLIGRKFED VQ D K P+++ + + + I+ +TK FSP +
Sbjct: 93 NPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEE 150
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FND+QRQATKDAG
Sbjct: 180 AYFNDAQRQATKDAG 194
>At5g28540.1 68418.m03480 luminal binding protein 1 (BiP-1) (BP1)
SWISS-PROT:Q9LKR3 PMID:8888624
Length = 669
Score = 100 bits (239), Expect = 7e-22
Identities = 44/57 (77%), Positives = 52/57 (91%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTP 259
+GIDLGTTYSCVGV+++G VEIIANDQGNR TPS+V FTD+ERLIG+AAKNQ A+ P
Sbjct: 38 IGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNP 94
Score = 72.1 bits (169), Expect = 2e-13
Identities = 34/50 (68%), Positives = 42/50 (84%), Gaps = 1/50 (2%)
Frame = +3
Query: 363 GKPKIKVAYK-GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
GKP I+V K GE K F PEE+S+M+LTKMKETAEAYLGK +++AV+TVP
Sbjct: 130 GKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVP 179
Score = 48.8 bits (111), Expect = 2e-06
Identities = 25/58 (43%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEANLRSR*HIR-VKTKPFSPRK 423
+P T+FD KRLIGRKFED VQ D K P+++ + + + I+ +TK FSP +
Sbjct: 93 NPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEE 150
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FND+QRQATKDAG
Sbjct: 180 AYFNDAQRQATKDAG 194
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 99.1 bits (236), Expect = 2e-21
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTP 259
+GIDLGTTYSCVGV+ + VEIIANDQGNR TPS+VAFTDTERLIG+AAKNQ A P
Sbjct: 53 IGIDLGTTYSCVGVYHNKHVEIIANDQGNRITPSWVAFTDTERLIGEAAKNQAAKNP 109
Score = 76.2 bits (179), Expect = 1e-14
Identities = 34/49 (69%), Positives = 43/49 (87%)
Frame = +3
Query: 363 GKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
GKP I+V KGE+K F PEE+S+M+LTKMKETAEA+LGK +++AVITVP
Sbjct: 145 GKPYIQVKVKGEEKLFSPEEISAMILTKMKETAEAFLGKKIKDAVITVP 193
Score = 50.8 bits (116), Expect = 6e-07
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEANLRSR*HIRVKTKPFSPRK 423
+P TIFD KRLIGRKF+D VQ D+K P++V + + + ++ + K FSP +
Sbjct: 108 NPERTIFDPKRLIGRKFDDPDVQRDIKFLPYKVVNKDGKPYIQVKVKGEEKLFSPEE 164
>At5g09590.1 68418.m01110 heat shock protein 70 / HSP70 (HSC70-5)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746590
Length = 682
Score = 64.9 bits (151), Expect = 3e-11
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 1/163 (0%)
Frame = +2
Query: 68 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQ 244
K A +GIDLGTT SCV V + ++I N +G RTTPS VAF T E L+G AK Q
Sbjct: 53 KPAGNDVIGIDLGTTNSCVAVMEGKNPKVIENAEGARTTPSVVAFNTKGELLVGTPAKRQ 112
Query: 245 VAMTPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRLTVMRQT*DQGSI*G*RQNLFPRGS 424
PT ++ + K + + ++R + Q P
Sbjct: 113 AVTNPTN--TVSGTKRLIGRKFDDPQTQKEMKMVPYKIVRAPNGDAWVEANGQQYSPSQI 170
Query: 425 QFHGAYENEGNCRSLSWQNCAECSYHGSAFFNDSQRQATKDAG 553
+ + + ++ + A+FND+QRQATKDAG
Sbjct: 171 GAFILTKMKETAEAYLGKSVTKAVVTVPAYFNDAQRQATKDAG 213
Score = 51.2 bits (117), Expect = 4e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +3
Query: 408 FFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
+ P ++ + +LTKMKETAEAYLGK+V AV+TVP
Sbjct: 165 YSPSQIGAFILTKMKETAEAYLGKSVTKAVVTVP 198
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 351
+P NT+ KRLIGRKF+D Q +MK P+++
Sbjct: 116 NPTNTVSGTKRLIGRKFDDPQTQKEMKMVPYKI 148
>At5g49910.1 68418.m06180 heat shock protein 70 / HSP70 (HSC70-7)
identical to heat shock protein 70 [Arabidopsis
thaliana] GI:6746592
Length = 718
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 68 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQ 244
++ VGIDLGTT S V + GK I+ N +G RTTPS VA+T + +RL+G AK Q
Sbjct: 74 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSKDRLVGQIAKRQ 133
Query: 245 VAMTPTTQY 271
+ P +
Sbjct: 134 AVVNPENTF 142
Score = 35.1 bits (77), Expect = 0.031
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3
Query: 402 KTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
K F EE+S+ VL K+ + A +L V AVITVP
Sbjct: 184 KQFAAEEISAQVLRKLVDDASRFLNDKVTKAVITVP 219
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQR ATKDAG
Sbjct: 220 AYFNDSQRTATKDAG 234
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDE 363
+P NT F KR IGR+ + V + K + V DE
Sbjct: 137 NPENTFFSVKRFIGRRMNE--VAEESKQVSYRVIKDE 171
>At4g24280.1 68417.m03486 heat shock protein 70, putative / HSP70,
putative strong similarity to heat shock protein 70
[Arabidopsis thaliana] GI:6746592; similar to heat shock
70 protein - Spinacia oleracea,PID:g2654208
Length = 718
Score = 62.9 bits (146), Expect = 1e-10
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Frame = +2
Query: 68 KMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQ 244
++ VGIDLGTT S V + GK I+ N +G RTTPS VA+T + +RL+G AK Q
Sbjct: 74 RVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVAYTKSGDRLVGQIAKRQ 133
Query: 245 VAMTPTTQY 271
+ P +
Sbjct: 134 AVVNPENTF 142
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = +3
Query: 375 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
+K+ +K F EE+S+ VL K+ + A +L V AVITVP
Sbjct: 175 VKLECPAINKQFAAEEISAQVLRKLVDDASRFLNDKVTKAVITVP 219
Score = 31.5 bits (68), Expect = 0.39
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FNDSQR ATKDAG
Sbjct: 220 AYFNDSQRTATKDAG 234
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSDEAN 369
+P NT F KR IGRK + V + K + V DE N
Sbjct: 137 NPENTFFSVKRFIGRKMNE--VDEESKQVSYRVVRDENN 173
>At4g37910.1 68417.m05361 heat shock protein 70, mitochondrial,
putative / HSP70, mitochondrial, putative strong
similarity to SP|Q01899 Heat shock 70 kDa protein,
mitochondrial precursor {Phaseolus vulgaris}
Length = 682
Score = 58.0 bits (134), Expect = 4e-09
Identities = 29/59 (49%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMTPT 262
+GIDLGTT SCV V + +I N +G+RTTPS VA E L+G AK Q PT
Sbjct: 55 IGIDLGTTNSCVSVMEGKTARVIENAEGSRTTPSVVAMNQKGELLVGTPAKRQAVTNPT 113
Score = 52.0 bits (119), Expect = 3e-07
Identities = 22/34 (64%), Positives = 28/34 (82%)
Frame = +3
Query: 408 FFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 509
F P ++ + VLTKMKETAEAYLGK++ AV+TVP
Sbjct: 160 FSPSQIGANVLTKMKETAEAYLGKSINKAVVTVP 193
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 351
+P NTIF +KRLIGR+F+D Q +MK P+++
Sbjct: 111 NPTNTIFGSKRLIGRRFDDPQTQKEMKMVPYKI 143
Score = 32.7 bits (71), Expect = 0.17
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 509 AFFNDSQRQATKDAG 553
A+FND+QRQATKDAG
Sbjct: 194 AYFNDAQRQATKDAG 208
>At1g79930.1 68414.m09340 heat shock protein, putative contains Pfam
profile: PF00012 Heat shock hsp70 proteins; similar to
heat-shock proteins GB:CAA94389, GB:AAD55461
[Arabidopsis thaliana]
Length = 831
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQ 268
VG D G V V + ++++ ND+ NR TP+ V F D +R IG A M P
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 269 YS 274
S
Sbjct: 64 IS 65
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 351
+P N+I KRLIGR+F D +Q D+K PF V
Sbjct: 59 NPKNSISQIKRLIGRQFSDPELQRDIKSLPFSV 91
>At1g79920.2 68414.m09339 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQ 268
VG D G V V + ++++ ND+ NR TP+ V F D +R IG A M P
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 269 YS 274
S
Sbjct: 64 IS 65
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 351
+P N+I KRLIGR+F D +Q D+K PF V
Sbjct: 59 NPKNSISQIKRLIGRQFSDPELQRDIKSLPFSV 91
>At1g79920.1 68414.m09338 heat shock protein 70, putative / HSP70,
putative contains Pfam profile: PF00012 Heat shock hsp70
proteins; similar to heat-shock proteins GB:CAA94389,
GB:AAD55461 [Arabidopsis thaliana]
Length = 736
Score = 48.0 bits (109), Expect = 4e-06
Identities = 22/62 (35%), Positives = 30/62 (48%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQ 268
VG D G V V + ++++ ND+ NR TP+ V F D +R IG A M P
Sbjct: 4 VGFDFGNENCLVAVARQRGIDVVLNDESNRETPAIVCFGDKQRFIGTAGAASTMMNPKNS 63
Query: 269 YS 274
S
Sbjct: 64 IS 65
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1
Query: 253 DPNNTIFDAKRLIGRKFEDATVQADMKHWPFEV 351
+P N+I KRLIGR+F D +Q D+K PF V
Sbjct: 59 NPKNSISQIKRLIGRQFSDPELQRDIKSLPFSV 91
>At1g11660.1 68414.m01339 heat shock protein, putative strong
similarity to gb|Z70314 heat-shock protein from
Arabidopsis thaliana and is a member of the PF|00012
Hsp70 protein family
Length = 773
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +2
Query: 89 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQ 268
VG D+G + V + ++++ ND+ NR P+ V+F + +R +G AA M P +
Sbjct: 4 VGFDVGNENCVIAVAKQRGIDVLLNDESNRENPAMVSFGEKQRFMGAAAAASATMHPKST 63
Query: 269 YS 274
S
Sbjct: 64 IS 65
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 256 PNNTIFDAKRLIGRKFEDATVQADMKHWPFEVDSD-EANLRSR*HIRVKTKPFSP 417
P +TI KRLIGRKF + VQ D++ +PFE D + ++ R + + FSP
Sbjct: 60 PKSTISQLKRLIGRKFREPDVQNDLRLFPFETSEDSDGGIQIRLRYMGEIQSFSP 114
>At4g16660.1 68417.m02517 heat shock protein 70, putative / HSP70,
putative
Length = 867
Score = 36.3 bits (80), Expect = 0.014
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 74 AKAPAVGIDLGTTYSCVGV--FQHGK--VEIIANDQGNRTTPSYVAFTDTERLIGDAAKN 241
+++ + +DLG+ + V V + G+ + + N+ R +P+ VAF +RL+G+ A
Sbjct: 22 SESAVLSVDLGSEWVKVAVVNLKRGQSPISVAINEMSKRKSPALVAFQSGDRLLGEEAAG 81
Query: 242 QVAMTPTTQYS 274
A P YS
Sbjct: 82 ITARYPNKVYS 92
>At2g32120.2 68415.m03926 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 34.3 bits (75), Expect = 0.055
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 86 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD 208
A+GID+GT+ + V+ +V I+ N + + S+V F D
Sbjct: 30 ALGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFKD 70
Score = 34.3 bits (75), Expect = 0.055
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRS 515
+P I ++ PEEV ++ L +++ AEA L + V+N V+TVP S
Sbjct: 127 RPFIAALVNNAWRSTTPEEVLAIFLVELRLMAEAQLKRPVRNVVLTVPVS 176
>At2g32120.1 68415.m03925 heat shock protein 70 family protein /
HSP70 family protein similar to SP|P22953 Heat shock
cognate 70 kDa protein 1 (Hsc70.1) {Arabidopsis
thaliana}; contains InterPro accession IPR001023: Heat
shock protein Hsp70
Length = 563
Score = 34.3 bits (75), Expect = 0.055
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 86 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD 208
A+GID+GT+ + V+ +V I+ N + + S+V F D
Sbjct: 30 ALGIDIGTSQCSIAVWNGSQVHILRNTRNQKLIKSFVTFKD 70
Score = 34.3 bits (75), Expect = 0.055
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 366 KPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPRS 515
+P I ++ PEEV ++ L +++ AEA L + V+N V+TVP S
Sbjct: 127 RPFIAALVNNAWRSTTPEEVLAIFLVELRLMAEAQLKRPVRNVVLTVPVS 176
>At4g24910.1 68417.m03566 hypothetical protein contains Pfam profile
PF04669: Protein of unknown function (DUF579)
Length = 315
Score = 29.5 bits (63), Expect = 1.6
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -3
Query: 194 HKTEWSCCPGRWR*SPPSRAG--RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQL 27
H++ S R SPPS +HQR ST +F +R L+P IF S L+ L
Sbjct: 6 HQSSLSILNPLLRFSPPSSPDNPKHQRLSTIKMPKFTVRKLIPLLIFVLSSLSVLRLL 63
>At2g27350.5 68415.m03295 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 84 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 242
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.4 68415.m03294 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 388
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 84 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 242
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.3 68415.m03293 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 506
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 84 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 242
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.2 68415.m03292 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 84 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 242
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At2g27350.1 68415.m03291 OTU-like cysteine protease family protein
contains Pfam profile PF02338: OTU-like cysteine
protease
Length = 505
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +3
Query: 84 PQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 242
P+ S P + V S G R PT RA GP L+ +P+ S PR+
Sbjct: 122 PKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRS 174
>At5g52410.2 68418.m06502 expressed protein
Length = 761
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -3
Query: 116 STWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKRARFSC 3
+TW P LR+ L IF + +LS+R R SC
Sbjct: 6 ATWTPSSLQLRIALNHGIFKAPERAKMTKLSRRLRISC 43
>At4g27630.2 68417.m03972 expressed protein
Length = 467
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 131 RHQRKSTWYPDRFLLRVLLPFCIFNQSCYLFLKQLSKR 18
R R W D F L VLL F + CYL L+ R
Sbjct: 71 REARMVNWKVDLFCLIVLLVFMLPYYHCYLMLRNTGVR 108
>At4g34940.1 68417.m04953 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 664
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/44 (25%), Positives = 22/44 (50%)
Frame = +1
Query: 202 HRHRASHRRCRQEPGGDDPNNTIFDAKRLIGRKFEDATVQADMK 333
++ +H + P G++P + + GR++ED +A MK
Sbjct: 378 NQQHQNHTKGGSNPRGNNPTHVSLMGTSIKGREYEDPATKAQMK 421
>At4g18375.2 68417.m02727 KH domain-containing protein contains
similarity to RNA-binding KH-domains PF:00013
Length = 606
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 173 NRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQYSMPNVSSDVSSKMLLC 319
N+ V F+ + LIG A +N + T+ S+ VS DVS +C
Sbjct: 138 NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVC 186
>At4g18375.1 68417.m02726 KH domain-containing protein contains
similarity to RNA-binding KH-domains PF:00013
Length = 532
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 173 NRTTPSYVAFTDTERLIGDAAKNQVAMTPTTQYSMPNVSSDVSSKMLLC 319
N+ V F+ + LIG A +N + T+ S+ VS DVS +C
Sbjct: 138 NKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVC 186
>At3g02270.1 68416.m00208 eIF4-gamma/eIF5/eIF2-epsilon
domain-containing protein similar to SP|Q13144
Translation initiation factor eIF-2B epsilon subunit
(eIF-2B GDP-GTP exchange factor) {Homo sapiens};
contains Pfam profile PF02020:
eIF4-gamma/eIF5/eIF2-epsilon
Length = 676
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 268 IFDAKRLIGRKFE-DATVQADMKHWPFEVDSDEANLRSR*HIRVKTK 405
+ K ++GR F A Q + P E DSDE NL S +++++K
Sbjct: 399 VLSFKVVVGRDFVVPAYSQVSLLRQPMEEDSDEENLLSGVDLQMESK 445
>At1g68330.1 68414.m07805 expressed protein
Length = 268
Score = 27.5 bits (58), Expect = 6.3
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 27 ELF*EQVTRLIKNTKWQKHPQ*ESIWVPRTLALVSSSTGRWRSSPTTRA-TGPLRLMLRS 203
ELF E ++ K + PQ + VPR+ +L SSS+ SS ++RA +RL
Sbjct: 64 ELFSEGKILPVQIKKEESLPQTVTFRVPRSASLSSSSSSSSSSSSSSRAPEKKMRLKELL 123
Query: 204 QTPSVSSEMPPR 239
P E PR
Sbjct: 124 LNPESDFEDKPR 135
>At1g04670.1 68414.m00464 expressed protein ; expression supported
by MPSS
Length = 126
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -1
Query: 427 LTSSGKKVLSSPLYATLILGLPHHCQPRKASASCR 323
L S+GK S PLY T + P Q ++ + C+
Sbjct: 10 LISNGKTARSVPLYRTFVSASPRPLQGKEEAEQCQ 44
>At3g25790.1 68416.m03210 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 357
Score = 27.1 bits (57), Expect = 8.3
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +3
Query: 42 QVTRLIKNTKWQKHPQ*ESIWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVS 221
Q T +N++ Q IWVP+T +++ S TT GP+ L S+ P S
Sbjct: 257 QTTPNNRNSQTQHFVVVGGIWVPQTNHSTANAVNAVASGETTGIYGPMVSSLPSEWPRHS 316
Query: 222 S 224
+
Sbjct: 317 N 317
>At1g16800.1 68414.m02018 tRNA-splicing endonuclease positive
effector-related contains similarity to SEN1, a positive
effector of tRNA-splicing endonuclease [Saccharomyces
cerevisiae] gi|172574|gb|AAB63976
Length = 1939
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 152 SPPSRAGR-HQRKSTWYPDRFLLRVLLP 72
S PS R +QRK W+ D F L + LP
Sbjct: 28 SDPSAVRRLNQRKEQWFTDAFTLLISLP 55
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,239,602
Number of Sequences: 28952
Number of extensions: 297215
Number of successful extensions: 940
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 939
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -