Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20096
(679 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical pr... 132 2e-31
Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical pr... 36 0.020
Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical pr... 36 0.020
L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical p... 33 0.19
AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical... 31 0.57
AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical ... 31 0.57
AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical ... 31 0.76
AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical ... 31 0.76
AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical ... 31 0.76
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 31 1.00
U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical p... 29 2.3
U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical p... 29 2.3
AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein. 29 3.0
AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical... 29 3.0
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 29 4.0
AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical ... 29 4.0
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 29 4.0
Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical pr... 28 7.0
Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical pr... 28 7.0
U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical pr... 28 7.0
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 28 7.0
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 28 7.0
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 28 7.0
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 28 7.0
Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical pr... 27 9.3
U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical p... 27 9.3
U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated p... 27 9.3
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 9.3
AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical... 27 9.3
AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical... 27 9.3
>Z92773-1|CAB07131.1| 395|Caenorhabditis elegans Hypothetical
protein W08E3.3 protein.
Length = 395
Score = 132 bits (319), Expect = 2e-31
Identities = 69/128 (53%), Positives = 92/128 (71%), Gaps = 3/128 (2%)
Frame = +1
Query: 256 SKVPAFLNVVDIAGLVRGAAEGQGLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVNP 435
SKVPAFLNV DIAGLV+GA+EGQGLGNAFLSH+ ACDA+F+LCRAFDD+DV HV+G+V+P
Sbjct: 81 SKVPAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDDDVTHVEGEVDP 140
Query: 436 VRDLETIAEELRLKDEEQL---LQHIENWTEWSTEAAKRNLNLNTIPWLKSRLFLVDEKK 606
VRDLE I+ EL KD + + L +E + + K+ + +T+ +K L +EKK
Sbjct: 141 VRDLEIISNELFAKDLQFIDGPLDKVEKLFTRANDKTKK-IEYDTLVRVKKCL---EEKK 196
Query: 607 HIRFGDWS 630
+R W+
Sbjct: 197 PVRQELWN 204
Score = 120 bits (289), Expect = 1e-27
Identities = 53/69 (76%), Positives = 63/69 (91%)
Frame = +2
Query: 56 LIGRVGTNLKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNESRVPVPDERYDYL 235
LIGR+GTNLKVGI+G+PNVGKSTFFNVLTKS+A AENFPFCTIDPNESRV V D+R+D+L
Sbjct: 14 LIGRLGTNLKVGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNESRVAVQDDRFDWL 73
Query: 236 CEYHKPEAK 262
++KP +K
Sbjct: 74 VNHYKPASK 82
>Z93385-2|CAB07637.1| 358|Caenorhabditis elegans Hypothetical
protein M01E5.2 protein.
Length = 358
Score = 36.3 bits (80), Expect = 0.020
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +2
Query: 89 GIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPN 193
G+VG PN GKS+ +++++ ++PF T+ P+
Sbjct: 192 GLVGFPNAGKSSLLRAISRAKPKVASYPFTTLHPH 226
Score = 33.5 bits (73), Expect = 0.14
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +1
Query: 280 VVDIAGLVRGAAEGQGLGNAFLSHIKACDAIF 375
V DI GL+ + +GLG +FL HI+ C++++
Sbjct: 240 VADIPGLIEDSHLNKGLGISFLKHIERCESLW 271
>Z49068-9|CAA88860.1| 556|Caenorhabditis elegans Hypothetical
protein K01C8.9 protein.
Length = 556
Score = 36.3 bits (80), Expect = 0.020
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 68 VGTNLKVGIVGVPNVGKSTFFNVLTKSQAA-AENFPFCTIDPNE 196
+ T+++VG+VG PNVGKS+ N L + +A N P T + E
Sbjct: 256 IKTSIRVGVVGFPNVGKSSVINSLKRRKACNVGNLPGITKEIQE 299
>L14745-12|AAR25659.1| 366|Caenorhabditis elegans Hypothetical
protein C02F5.3 protein.
Length = 366
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 83 KVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTI 184
+V +VG P+VGKST + +T + + A + F T+
Sbjct: 64 RVAMVGFPSVGKSTLLSSMTSTHSEAAGYEFTTL 97
>AF036706-10|AAM97948.1| 633|Caenorhabditis elegans Hypothetical
protein T07A9.9b protein.
Length = 633
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 92 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 181
+ G PNVGKS+F N +T++ + + F T
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTT 203
>AF036706-9|AAK39281.1| 681|Caenorhabditis elegans Hypothetical
protein T07A9.9a protein.
Length = 681
Score = 31.5 bits (68), Expect = 0.57
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 92 IVGVPNVGKSTFFNVLTKSQAAAENFPFCT 181
+ G PNVGKS+F N +T++ + + F T
Sbjct: 174 LCGFPNVGKSSFINNVTRADVEVQPYAFTT 203
>AL021571-4|CAI79270.1| 610|Caenorhabditis elegans Hypothetical
protein T19A6.2c protein.
Length = 610
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQ 151
+ VG +G PNVGKS+ N L K +
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKK 349
>AL021571-2|CAA16514.2| 592|Caenorhabditis elegans Hypothetical
protein T19A6.2b protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQ 151
+ VG +G PNVGKS+ N L K +
Sbjct: 267 ISVGFIGYPNVGKSSLVNTLRKKK 290
>AL021571-1|CAA16512.2| 651|Caenorhabditis elegans Hypothetical
protein T19A6.2a protein.
Length = 651
Score = 31.1 bits (67), Expect = 0.76
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQ 151
+ VG +G PNVGKS+ N L K +
Sbjct: 326 ISVGFIGYPNVGKSSLVNTLRKKK 349
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 30.7 bits (66), Expect = 1.00
Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +2
Query: 86 VGIVGVPNVGKSTFFNVLTKSQAA-AENFPFCTIDP 190
+G++G PN GKST L ++ ++ F T++P
Sbjct: 164 IGLLGFPNAGKSTLLKALVPEKSVKIADYAFTTVNP 199
>U41105-15|AAT81191.1| 298|Caenorhabditis elegans Hypothetical
protein T02G5.13b protein.
Length = 298
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 62 GRVGTNLKVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNES 199
GR +VGI G P VGKS+F L ++ + TIDP +
Sbjct: 18 GRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSA 65
>U41105-14|AAA82408.2| 399|Caenorhabditis elegans Hypothetical
protein T02G5.13a protein.
Length = 399
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = +2
Query: 62 GRVGTNLKVGIVGVPNVGKSTFFNVL--TKSQAAAENFPFCTIDPNES 199
GR +VGI G P VGKS+F L ++ + TIDP +
Sbjct: 119 GRDSMIFRVGISGSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSA 166
>AF292048-1|AAG41144.1| 133|Caenorhabditis elegans 3A339 protein.
Length = 133
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 460 EELRLKDEEQLLQHIENW-TEWSTEAAKR-NLNLNTIPWLKSRL 585
EE++LKD E L++ E W E E AK N+ L++ P + + L
Sbjct: 81 EEVKLKDLETKLENFEKWRKEIRLEGAKELNIKLHSEPEVSAEL 124
>AF099913-14|AAC68745.1| 133|Caenorhabditis elegans Hypothetical
protein C29F9.2 protein.
Length = 133
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Frame = +1
Query: 460 EELRLKDEEQLLQHIENW-TEWSTEAAKR-NLNLNTIPWLKSRL 585
EE++LKD E L++ E W E E AK N+ L++ P + + L
Sbjct: 81 EEVKLKDLETKLENFEKWRKEIRLEGAKELNIKLHSEPEVSAEL 124
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 172
+++ +VG+ N GK+TF NV+ Q + P
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIP 51
>AC091125-1|AAK27889.2| 313|Caenorhabditis elegans Hypothetical
protein Y67D2.4 protein.
Length = 313
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 68 VGTNLKVGIVGVPNVGKSTFFNVL 139
V T + +VG+PNVGKS+ N +
Sbjct: 112 VKTEYQAMVVGIPNVGKSSLINAI 135
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFP 172
+++ +VG+ N GK+TF NV+ Q + P
Sbjct: 21 MELTLVGLQNSGKTTFVNVIASGQFTEDMIP 51
>Z22181-6|CAA80185.1| 178|Caenorhabditis elegans Hypothetical
protein ZK632.8 protein.
Length = 178
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 68 VGTNLKVGIVGVPNVGKST-FFNVLTKSQ 151
+G K+ +VG+ N GK+T +N +TK Q
Sbjct: 14 IGKKYKIIVVGLDNAGKTTILYNYVTKDQ 42
>Z93393-2|CAB07689.2| 890|Caenorhabditis elegans Hypothetical
protein Y48E1B.2a protein.
Length = 890
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 6/31 (19%)
Frame = +2
Query: 74 TNLKVG------IVGVPNVGKSTFFNVLTKS 148
TN+K+G +VG N GKST FN L +S
Sbjct: 497 TNVKLGMRGDIFLVGCTNAGKSTMFNALLQS 527
>Z47075-7|CAA87384.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNES 199
L++ ++G PNVGKS N L + +A + T N S
Sbjct: 34 LQLAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNIS 73
>Z36752-8|CAA85330.1| 394|Caenorhabditis elegans Hypothetical
protein E02H1.2 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 80 LKVGIVGVPNVGKSTFFNVLTKSQAAAENFPFCTIDPNES 199
L++ ++G PNVGKS N L + +A + T N S
Sbjct: 34 LQLAVIGAPNVGKSLLTNSLIRCPLSAVSSKMDTTTRNIS 73
>U97196-2|AAB52461.2| 268|Caenorhabditis elegans Hypothetical
protein B0207.6 protein.
Length = 268
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 92 IVGVPNVGKSTFFNVLTKSQAAAENFPFCTI--DP-NESRVPVPD 217
++G P GKSTF LT + + PF TI DP N++ PD
Sbjct: 6 VIGAPGAGKSTFCAGLTDIFSQTKR-PFLTINLDPANDTMAYAPD 49
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 424 DVNPVRDLETIAEELRLKDEEQLLQHIENWTEWSTEAAKRNLNLNTIPWLKSRLF 588
D++ + +ET++ L D+E+ ENWT+W ++ T+ K RLF
Sbjct: 107 DIDACKLIETLSLSLICLDKERA----ENWTKWEASEEGEKPDIETL--CKERLF 155
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 86 VGIVGVPNVGKSTFFNVL 139
VG+VG PNVGKS+ N L
Sbjct: 132 VGMVGYPNVGKSSTINKL 149
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 86 VGIVGVPNVGKSTFFNVL 139
VG+VG PNVGKS+ N L
Sbjct: 132 VGMVGYPNVGKSSTINKL 149
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 86 VGIVGVPNVGKSTFFNVL 139
VG+VG PNVGKS+ N L
Sbjct: 301 VGMVGYPNVGKSSTINKL 318
>Z81134-8|CAB57908.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 83 KVGIVGVPNVGKSTFFNVLTK--SQAAAENFPFCTIDPNESR 202
++G VG P+VGKST L S+ AA F T P R
Sbjct: 64 RIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIR 105
>U97005-11|AAB52288.1| 891|Caenorhabditis elegans Hypothetical
protein F19F10.10 protein.
Length = 891
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +1
Query: 343 LSHIK-ACDAIFNLCRAFDDEDVIHV-DGDVNPVRDLETIAEELRL 474
+SH+ ACD IF++ R ED++ V + D + TIA + RL
Sbjct: 757 ISHLTDACDEIFSIFRVRQPEDILDVKEIDTRVLGTAITIAGDKRL 802
>U55374-8|AAB36868.3| 1538|Caenorhabditis elegans Uncoordinated
protein 2, isoform a protein.
Length = 1538
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 187 VDGAERKVFSCCLTLGKNIEECR 119
VD AERK CC ++GK I++ R
Sbjct: 357 VDEAERKKRGCCHSVGKFIKQLR 379
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 187 VDGAERKVFSCCLTLGKNIEECR 119
VD AERK CC ++GK I++ R
Sbjct: 357 VDEAERKKRGCCHSVGKFIKQLR 379
>AL117202-33|CAB55097.1| 366|Caenorhabditis elegans Hypothetical
protein T28D6.6 protein.
Length = 366
Score = 27.5 bits (58), Expect = 9.3
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +2
Query: 83 KVGIVGVPNVGKSTFFNVLTK--SQAAAENFPFCTIDPNESR 202
++G VG P+VGKST L S+ AA F T P R
Sbjct: 64 RIGFVGFPSVGKSTLLCNLAGVFSEVAAYEFTTLTTVPGVIR 105
>AF106577-10|AAC78189.1| 796|Caenorhabditis elegans Hypothetical
protein F46F5.11 protein.
Length = 796
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 325 GLGNAFLSHIKACDAIFNLCRAFDDEDVIHVDGDVN 432
GL N + A DAIFN+ + D V H+ G N
Sbjct: 572 GLSNVEGYFLMADDAIFNIWQRIDYSRVFHLHGSYN 607
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,692,135
Number of Sequences: 27780
Number of extensions: 272203
Number of successful extensions: 1082
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1082
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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