Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20095
         (724 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domai...    67   1e-11
U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domai...    33   0.21 
Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical pr...    32   0.48 
Z70205-4|CAA94115.2|  528|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL021488-5|CAL49450.1|  408|Caenorhabditis elegans Hypothetical ...    29   4.4  
AL021488-4|CAA16363.2|  531|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr...    28   5.9  

>U43375-1|AAA83618.1|  709|Caenorhabditis elegans Sulfatase domain
           protein protein 1 protein.
          Length = 709

 Score = 67.3 bits (157), Expect = 1e-11
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 354 NFVLILTDDQDVVLGGMDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLL 509
           N +LILTDDQD+ LG MD M    + + + G  FT+ YVT+PICCPSR+++L
Sbjct: 36  NVILILTDDQDIELGSMDFMPKTSQIMKERGTEFTSGYVTTPICCPSRSTIL 87



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +2

Query: 497 SQFATGMYVHNHKTVNNSLHGGCYGENW-KYHEKQTFATILQEAGYDTFYAG 649
           S   TG+YVHNH    N+ +  C G  W K HEK++    LQEAGY T Y G
Sbjct: 84  STILTGLYVHNHHVHTNNQN--CTGVEWRKVHEKKSIGVYLQEAGYRTAYLG 133



 Score = 30.7 bits (66), Expect = 1.1
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +1

Query: 568 WRELEISRETDVRYYTSGSRI*HVLCGEYLNQYGTKEAGGPEVVPPGWTEW 720
           WR++   +   V    +G R  ++  G+YLN+Y          +PPGW EW
Sbjct: 109 WRKVHEKKSIGVYLQEAGYRTAYL--GKYLNEYDGS------YIPPGWDEW 151


>U53180-8|AAA96290.1|  452|Caenorhabditis elegans Sulfatase domain
           protein protein 2 protein.
          Length = 452

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
 Frame = +3

Query: 345 KRPNFVLILTDDQ---DVVLGG--MDPMTNVQRFIGKEGITFTNSYVTSPICCPSRASLL 509
           + PN V+++ DD    D+   G      T V R +  EG  FT +Y    +C PSRA  +
Sbjct: 31  RHPNIVILMIDDLGYGDIASYGHPTQEYTQVDR-MAAEGTRFTQAYSADSMCSPSRAGFI 89


>Z73103-6|CAE17680.1|   55|Caenorhabditis elegans Hypothetical
           protein C08F8.9 protein.
          Length = 55

 Score = 31.9 bits (69), Expect = 0.48
 Identities = 15/27 (55%), Positives = 17/27 (62%)
 Frame = +2

Query: 131 VKDFYYDPFKWSLVKSVGFFTVGVVIA 211
           V   Y DPF WS+ K V  F VGVV+A
Sbjct: 18  VNTVYNDPFFWSVFKGVIGFGVGVVVA 44


>Z70205-4|CAA94115.2|  528|Caenorhabditis elegans Hypothetical
           protein C11H1.5 protein.
          Length = 528

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +3

Query: 450 TFTNSYVTSPICCPSRASLLQACTFTTTRP*TIVFTADAMER-TGNITRNRRSLLYFRK 623
           T T S +TS    P+ AS     ++ T R   + FTA   E      T  R+ LLY+ K
Sbjct: 345 TSTTSDITSTTTAPTSASTYSTDSWATARQELVDFTATTPEPFDSKSTTTRQQLLYWPK 403


>AL021488-5|CAL49450.1|  408|Caenorhabditis elegans Hypothetical
           protein Y45F10A.7b protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 324 NNAVAELKRPNFVLILTDD-QDVVLGGMDPMTNVQRFI 434
           N   ++L +P F  ILTDD Q ++ GG+    N  R++
Sbjct: 128 NEKFSKLLKPIFNDILTDDNQSIIYGGLSTNDNFTRYL 165


>AL021488-4|CAA16363.2|  531|Caenorhabditis elegans Hypothetical
           protein Y45F10A.7a protein.
          Length = 531

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +3

Query: 324 NNAVAELKRPNFVLILTDD-QDVVLGGMDPMTNVQRFI 434
           N   ++L +P F  ILTDD Q ++ GG+    N  R++
Sbjct: 251 NEKFSKLLKPIFNDILTDDNQSIIYGGLSTNDNFTRYL 288


>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical
           protein W05B2.2 protein.
          Length = 1278

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 405 DPMTNVQRFIGKEGITFTNSYVTSPICCPSRAS 503
           DP  NVQR  GKE    T+    + +CCP  A+
Sbjct: 368 DPSDNVQRCSGKEHCPETHD-CKNTVCCPKPAA 399


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,436,874
Number of Sequences: 27780
Number of extensions: 372851
Number of successful extensions: 1005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)