Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20094
         (331 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   1.7  
AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   3.0  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   3.0  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   3.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            22   5.2  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    22   5.2  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         22   6.9  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         22   6.9  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    21   9.1  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    21   9.1  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    21   9.1  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
 Frame = +1

Query: 7   ERCRSPVKIKNTIVMDDDWD-DSCEAVVVPPPPLQNHDSVDEGHSL 141
           E C+ P   K   V  + +     E+ V+PP  +  H     GHSL
Sbjct: 121 ETCQYPFSAKQKEVCINPYHYKRVESPVLPPVLVPRHSEFAPGHSL 166


>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -1

Query: 127 HLQNHGSVVGEVAPQQLHRN--HPSHHPLQW 41
           H Q+H         QQ H +  HP+HHPL +
Sbjct: 118 HHQHHHQHPHLPHVQQHHPSVHHPAHHPLHY 148


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = -1

Query: 127 HLQNHGSVVGEVAPQQLHRNHPSHH 53
           HL    ++   +    LH +HP HH
Sbjct: 332 HLHQMSAMSMGMGSMGLHHHHPGHH 356


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 78  SCCGATSPTTEP*FCR*RSQSVQRKR 155
           +CCG  SPT E    R   ++++  R
Sbjct: 451 TCCGDLSPTFEKPLLREMEKTIEASR 476


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -1

Query: 130 LHLQNHGSVVGEVAPQQLHRNHPSHH 53
           LH Q H     +   QQLH +H  HH
Sbjct: 144 LHHQAHQQQ--QQQQQQLHHHHHHHH 167


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 85  QQLHRNHPSHHPLQW 41
           QQ + +HP H P+Q+
Sbjct: 323 QQQYHSHPHHTPVQF 337


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 88  PQQLHRNHPSHHP 50
           P   H  HP+HHP
Sbjct: 173 PYPQHVLHPAHHP 185


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -1

Query: 88  PQQLHRNHPSHHP 50
           P   H  HP+HHP
Sbjct: 173 PYPQHVLHPAHHP 185


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 70  SCEAVVVPPPPLQNHDSVDEGHSLSR 147
           SC   V+P  PL+ H+ ++    + R
Sbjct: 65  SCVEEVLPTDPLELHEKLENETDIPR 90


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +1

Query: 55  DDWDDSCEAVVVPP 96
           DDWDD  +    PP
Sbjct: 248 DDWDDEMDGEWEPP 261


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 8/20 (40%), Positives = 9/20 (45%)
 Frame = -1

Query: 112 GSVVGEVAPQQLHRNHPSHH 53
           GS V   +    H  HP HH
Sbjct: 486 GSTVNGASLTHSHHAHPHHH 505


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 275,914
Number of Sequences: 2352
Number of extensions: 3866
Number of successful extensions: 23
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)