Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20094
(331 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical ... 28 1.4
Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical pr... 27 2.4
AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical ... 27 2.4
U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical p... 27 4.2
Z92789-2|CAB07219.1| 344|Caenorhabditis elegans Hypothetical pr... 26 5.5
U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical pr... 26 5.5
U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical p... 26 7.3
AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical ... 26 7.3
AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical ... 26 7.3
Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical p... 25 9.7
Z82268-11|CAB05203.1| 262|Caenorhabditis elegans Hypothetical p... 25 9.7
Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical p... 25 9.7
AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical ... 25 9.7
AL021476-2|CAA16318.1| 262|Caenorhabditis elegans Hypothetical ... 25 9.7
AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical ... 25 9.7
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 25 9.7
AC084153-1|AAK84596.1| 385|Caenorhabditis elegans Hypothetical ... 25 9.7
>AC006733-9|AAF60491.2| 3901|Caenorhabditis elegans Hypothetical
protein Y32H12A.8 protein.
Length = 3901
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 52 DDDWDDSCEAVVVPPPPLQNHDSVDEGH-SLSRGRGFPSFNEDDEKE 189
D+D D + + PPPP +N V E SR R E+DE E
Sbjct: 1002 DEDRTDLVKYYLNPPPPPKNEVRVQEEQLEGSRKRKLEQIQEEDEDE 1048
>Z71180-3|CAA94892.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 91 PPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEK 186
PPPP QN SV+E + F S ++ EK
Sbjct: 388 PPPPQQNSPSVNENYHPELVNQFKSHLDEHEK 419
>AL021474-7|CAA16311.2| 763|Caenorhabditis elegans Hypothetical
protein F22E12.1 protein.
Length = 763
Score = 27.5 bits (58), Expect = 2.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 91 PPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEK 186
PPPP QN SV+E + F S ++ EK
Sbjct: 388 PPPPQQNSPSVNENYHPELVNQFKSHLDEHEK 419
>U00031-10|AAK18872.2| 460|Caenorhabditis elegans Hypothetical
protein B0361.2a protein.
Length = 460
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +1
Query: 52 DDDWDDSCEAVVVPPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEKE 189
DDD DD V+ P P+ + G S G+ F + ++ +K+
Sbjct: 6 DDDDDDYSGRKVIKPKPIAEKYAKKLGSEFSTGKTFVTGSDKSQKD 51
>Z92789-2|CAB07219.1| 344|Caenorhabditis elegans Hypothetical
protein H02I12.5 protein.
Length = 344
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 88 VPPPPLQNHDSVDEGH 135
+PP P NHD++ EGH
Sbjct: 37 LPPQPNINHDAIIEGH 52
>U53147-2|AAA96114.2| 935|Caenorhabditis elegans Hypothetical
protein C01B7.1a protein.
Length = 935
Score = 26.2 bits (55), Expect = 5.5
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +2
Query: 272 EQHSDYETNGDHDDRGRGE 328
++H D + GD DD G GE
Sbjct: 720 QEHEDEDGEGDEDDDGEGE 738
>U29244-15|AAC71096.2| 471|Caenorhabditis elegans Hypothetical
protein ZK1248.15 protein.
Length = 471
Score = 25.8 bits (54), Expect = 7.3
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 64 DDSCEAVVVPPPPLQNHDSV-DEGHSLSRGRGFPSFNEDDEKEN 192
DD E VVPPP ++ + + DE S R R S +KE+
Sbjct: 80 DDKMEVDVVPPPKRKSMEKLDDEEFSWKRPRRSDSSERITKKED 123
>AC084155-9|AAO25978.1| 423|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9b protein.
Length = 423
Score = 25.8 bits (54), Expect = 7.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 DDDWDDSCEAVVVPPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEKENGYG 201
DD+W D EAVV P S + GF NEDD+ ++ +G
Sbjct: 101 DDEWGDFGEAVVAAAPIQARPQSPPPSLKMD---GFN--NEDDDDDDDWG 145
>AC084155-8|AAG23358.2| 499|Caenorhabditis elegans Hypothetical
protein Y45G5AM.9a protein.
Length = 499
Score = 25.8 bits (54), Expect = 7.3
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 52 DDDWDDSCEAVVVPPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEKENGYG 201
DD+W D EAVV P S + GF NEDD+ ++ +G
Sbjct: 101 DDEWGDFGEAVVAAAPIQARPQSPPPSLKMD---GFN--NEDDDDDDDWG 145
>Z82268-12|CAL64003.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 91 PPPPLQNHDSV 123
PPPP QNH++V
Sbjct: 62 PPPPTQNHEAV 72
>Z82268-11|CAB05203.1| 262|Caenorhabditis elegans Hypothetical
protein Y37A1C.1b protein.
Length = 262
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 91 PPPPLQNHDSV 123
PPPP QNH++V
Sbjct: 62 PPPPTQNHEAV 72
>Z82268-10|CAB05202.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 91 PPPPLQNHDSV 123
PPPP QNH++V
Sbjct: 62 PPPPTQNHEAV 72
>AL021476-3|CAL63996.1| 1210|Caenorhabditis elegans Hypothetical
protein Y37A1C.1c protein.
Length = 1210
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 91 PPPPLQNHDSV 123
PPPP QNH++V
Sbjct: 62 PPPPTQNHEAV 72
>AL021476-2|CAA16318.1| 262|Caenorhabditis elegans Hypothetical
protein Y37A1C.1b protein.
Length = 262
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 91 PPPPLQNHDSV 123
PPPP QNH++V
Sbjct: 62 PPPPTQNHEAV 72
>AL021476-1|CAA16317.1| 972|Caenorhabditis elegans Hypothetical
protein Y37A1C.1a protein.
Length = 972
Score = 25.4 bits (53), Expect = 9.7
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +1
Query: 91 PPPPLQNHDSV 123
PPPP QNH++V
Sbjct: 62 PPPPTQNHEAV 72
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/19 (57%), Positives = 16/19 (84%), Gaps = 1/19 (5%)
Frame = +1
Query: 142 SRGRGFPSFNED-DEKENG 195
SRGRG ++NED DE+++G
Sbjct: 409 SRGRGGDAYNEDSDEEQHG 427
>AC084153-1|AAK84596.1| 385|Caenorhabditis elegans Hypothetical
protein Y22D7AL.7 protein.
Length = 385
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 43 IVMDDDWDDSCEAVVVPPPPLQ--NHDSVDE 129
+ +D + D + PPPPLQ N+D VD+
Sbjct: 326 VALDLNIDKNSSFAPPPPPPLQKINNDGVDD 356
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,342,321
Number of Sequences: 27780
Number of extensions: 104232
Number of successful extensions: 424
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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