Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20094
(331 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 1.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 2.2
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 2.9
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 2.9
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 2.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 3.9
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 5.1
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 20 6.7
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 20 6.7
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 20 6.7
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 20 6.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 20 6.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 6.7
AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein ... 20 6.7
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 22.6 bits (46), Expect = 1.3
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 91 PPPPLQNHD 117
PPPP +NHD
Sbjct: 1860 PPPPPRNHD 1868
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 2.2
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +1
Query: 76 EAVVVPPPPLQNHDSVDEGHSLSRGRGFPSFNEDDEKE-NG 195
E V P Q+H S+D +++S S + DE E NG
Sbjct: 529 ETTPVLPSRFQSHPSIDSANTISNS----SLQDYDETEFNG 565
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 2.9
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -1
Query: 316 PIIMVTISLIVAVL 275
P+I+ T++L+VAV+
Sbjct: 1616 PLIVATVALVVAVV 1629
Score = 19.8 bits (39), Expect = 8.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 69 IIPVIIHYNGIFYFHWT 19
I+ I Y I FHWT
Sbjct: 1529 ILYFTIQYRPINEFHWT 1545
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 2.9
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -1
Query: 316 PIIMVTISLIVAVL 275
P+I+ T++L+VAV+
Sbjct: 1612 PLIVATVALVVAVV 1625
Score = 19.8 bits (39), Expect = 8.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 69 IIPVIIHYNGIFYFHWT 19
I+ I Y I FHWT
Sbjct: 1525 ILYFTIQYRPINEFHWT 1541
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 2.9
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1
Query: 55 DDWDDSCEAVVVPPPPL 105
D+ + C+ PPPPL
Sbjct: 326 DNVEIKCDVTGTPPPPL 342
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.0 bits (42), Expect = 3.9
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -1
Query: 127 HLQNHGSVVGEVAPQQLHRNHPSHHPLQ 44
HLQNH + A Q HR + Q
Sbjct: 143 HLQNHHHHLQSTAVQDHHRPYQQQQQQQ 170
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 20.6 bits (41), Expect = 5.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 55 DDWDDSCEAVVVPPPPLQNHDSVDEGHSL 141
D D++ + V PPL N+D+ S+
Sbjct: 185 DPHDETAKKPRVLSPPLNNNDATPTDFSM 213
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = -1
Query: 106 VVGEVAPQQLHRNHPSHHPLQWY 38
++ ++ + +H N+ ++ LQ+Y
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYY 103
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = -1
Query: 106 VVGEVAPQQLHRNHPSHHPLQWY 38
++ ++ + +H N+ ++ LQ+Y
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYY 103
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = -1
Query: 106 VVGEVAPQQLHRNHPSHHPLQWY 38
++ ++ + +H N+ ++ LQ+Y
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYY 103
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = -1
Query: 106 VVGEVAPQQLHRNHPSHHPLQWY 38
++ ++ + +H N+ ++ LQ+Y
Sbjct: 81 IISSLSNKTIHNNNNNYKKLQYY 103
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 20.2 bits (40), Expect = 6.7
Identities = 6/21 (28%), Positives = 13/21 (61%)
Frame = -2
Query: 96 RWHHNSFTGIIPVIIHYNGIF 34
+W+ + F GI + + YN ++
Sbjct: 68 KWNASEFAGIRVIRVPYNRVW 88
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 6.7
Identities = 5/23 (21%), Positives = 15/23 (65%)
Frame = -1
Query: 106 VVGEVAPQQLHRNHPSHHPLQWY 38
++ ++ + +H N+ ++ LQ+Y
Sbjct: 314 IISSLSNKTIHNNNNNYKKLQYY 336
>AB083209-1|BAC54133.1| 87|Apis mellifera hypothetical protein
protein.
Length = 87
Score = 20.2 bits (40), Expect = 6.7
Identities = 9/30 (30%), Positives = 13/30 (43%)
Frame = +1
Query: 31 IKNTIVMDDDWDDSCEAVVVPPPPLQNHDS 120
I+ + M D + + P PP N DS
Sbjct: 33 IRQAVAMRDPRSNRGPVLFPPGPPPNNEDS 62
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,746
Number of Sequences: 438
Number of extensions: 1215
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7342137
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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